HHsearch 1.5 NAME d1hqia_ FAM FILE d1hqia_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i d1hqia_.a3m DATE Mon Mar 8 20:40:47 2010 LENG 90 match states, 90 columns in multiple alignment FILT 25 out of 29 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.3 EVD 0.4211 0.4202 SEQ >ss_dssp CCCCCCCEEECSSHHHHHHHHHHHHSSSCCCCCCSSCBCCCCSSEEEECHHHHHHHHHTGGGHHHHHHSEEECSSCCEECSSCEEEESCC >sa_dssp EECDBCDADCDEDECCEEDBDEBEEDEECDDEDCEDBACBCCDDECECEEEDEEEDEEEDECEEECEECEDDDADEECEEEDDBBACDDE >ss_pred CCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCEEEEEECCCEEEEEHHHHHHHCCCCEEHHHEEEEEEEEEEEEEEECCEEEEEECC >ss_conf 972699998547213689999985089848998260799954996999868758850991244534445122136789609869999829 >Consensus xsxxvxixlxxsxxaxxvVeaixxdnPxvxVxdxxxyvrIxxxxxlxixxxxieExLGrpxxxxxxevxmssxxGRixxxDdxxvlxxxx >d1hqia_ MSSLVYIAFQDNDNARYVVEAIIQDNPHAVVQHHPAMIRIEAEKRLEIRRETVEENLGRAWDVQEMLVDVITIGGNVDEDDDRFVLEWKN >UniRef50_D0D5Y6(27-112:124) Monooxygenase component MmoB/DmpM n=1 Tax=Citreicella sp. SE45 RepID=D0D5Y6_9RHOB E=3e-19 s/c=1.12 id=30% cov=90% ------VTMNDSVEARAIAEFMEENNPNVTVTYNPATIRIDGEGKLIFKMDEITEYLGREMTAEIFEVNTSTHYGRMVRVDDNTVI---- >UniRef50_A5ECB5(9-95:99) Toluene-4-monooxygenase system protein D n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ECB5_BRASB E=8e-18 s/c=1.05 id=26% cov=84% ----------DEDIIDAVIAASEQDNPDVEivIEDRGGYVRIQADRNFRLTQKSMQAALGRPFRLAEIEPSLVSFGGRLESMDDEWV----- >UniRef50_P18797(35-125:141) Methane monooxygenase regulatory protein B n=14 Tax=Proteobacteria RepID=MMOB_METCA E=3e-07 s/c=0.62 id=26% cov=96% -SDTVVLVLKKSDEINTFIEEILLTdykknvNPTVNVEDRAGYWWIKANGKIEVDCDEISELLGRQFNVYDFLVDVSSTIGRAYTLGNKFTI---- >UniRef50_Q479D6(54-142:146) Monooxygenase component MmoB/DmpM n=1 Tax=Dechloromonas aromatica RCB RepID=Q479D6_DECAR E=5e-23 s/c=1.21 id=33% cov=93% -NNLVGPVMRAGDLAMAVIEAAKVDNPGKEvfVDDKRAYIRIHTEQEMVLHRETIEEELGRPFKMNDLEVDLSSFAGQIESGDNSI------ >UniRef50_B2HJD0(9-93:105) Monooxygenase effector, MmoB/DmpM family protein n=2 Tax=Mycobacterium RepID=B2HJD0_MYCMM E=5e-21 s/c=1.19 id=26% cov=96% -STTVGIVLMKSEEADATVAYFTAECPQVRIQDRHTFYLCETEGMIRIPLAEVEEFLGKPLTMSRFLVVMSSYYGRARVEDDAFVI---- >UniRef50_Q2JA08(18-102:121) Monooxygenase component MmoB/DmpM n=3 Tax=Actinomycetales RepID=Q2JA08_FRASC E=2e-19 s/c=1.14 id=26% cov=94% -SNMCGVTLMNN-QNGYVVADVMRSKPGIRVEEYPSMIRVDGERKIEFDFDEISDALGFDFGVSDFEEIMSTHYGRMVHLDDKTVL---- >UniRef50_D2K2D9(15-99:109) Ethene monooxygenase coupling/effector protein n=3 Tax=Mycobacterium RepID=D2K2D9_9MYCO E=1e-16 s/c=1.03 id=18% cov=92% ----VGISLIGSSETNVIVDMVAELLPDAKITDNDVFFKIERDEMLSFDMVELSDRLGKPYTVHDFLVNMTSYYGRIVVKDHEIEI---- >UniRef50_A4WIC1(25-114:115) Monooxygenase component MmoB/DmpM n=7 Tax=Thermoprotei RepID=A4WIC1_PYRAR E=7e-16 s/c=0.94 id=27% cov=86% --------FMKTELAIYAVEAIARDNPDtfVGILDRGLYVRVVGNRRLVLNSSTLVELAGRPVRFpGEVEVIMSAFAGKIRVTGERI------ >UniRef50_Q9F3V2(20-102:117) Regulatory protein of multicomponent tetrahydrofuran monooxygenase n=1 Tax=Pseudonocardia tetrahydrofuranoxydans RepID=Q9F3V2_9PSEU E=2e-13 s/c=0.92 id=25% cov=77% ------------------VGRVCSQTPGVEVITNTTFLDVRAKDRLIVNFDAVGEELGSDMDGYVLQEHMTTHYGRMAMTDDSFIL---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1511 0 0 S 2 * * * * * * * * * * * 2772 * * * 228 * * * * 2 0 * * * * * * 3103 0 0 S 3 * * 3237 * * * * * * * * 1383 * * * 1703 2299 * * * 3 0 * * * * * * 3645 0 0 L 4 * * * * * * * * 2207 1413 2341 * * * * * 2249 * * * 4 0 * * * * * * 3645 0 0 V 5 3667 2617 * * * * * * * * * * * * * * * 399 * * 5 0 * * * * * * 3900 0 0 Y 6 3531 * 3667 * 2745 920 * * * * * * * * * * * 3517 * 3845 6 0 * * * * * * 3900 0 0 I 7 * * * * * * * 1362 * 3647 3647 * 2790 3893 * * * 2063 * * 7 0 * * * * * * 4014 0 0 A 8 2307 * * * * * * * * * * * * * * 2433 2063 1421 * * 8 0 * * * * * * 4014 0 0 F 9 * * * * 2414 * * 3996 * 708 2861 * * * * * * * * * 9 0 * * * * * * 4122 0 0 Q 10 * * * * * * 4250 3277 3939 * 1710 3530 * 2049 2783 * * * * * 10 0 * * * * * * 4135 0 0 D 11 2862 * 2081 * * 3357 * * 2042 * * 2319 * * * * 4526 4577 * * 11 0 * * * * * * 4218 0 0 N 12 * * * 4186 * 2815 * * * * * 1830 * * * 1327 3024 * * * 12 73 * 4344 * * * * 4218 0 0 D 13 4417 * 1543 1640 * * * * * * * 4518 3825 * * 3475 * 3553 * * 13 64 4518 * 2322 322 0 * 4215 1000 1000 N 14 * * * 1170 * * * 2388 * 2393 * 4496 * 4371 4597 * * 4631 * * 14 0 * * * * * * 4252 0 0 A 15 1069 * * * * 4065 * 3142 * * * 4371 * * * 3447 2538 4720 * * 15 0 * * * * * * 4252 0 0 R 16 4476 * 2163 4720 * 3479 * 4052 * * 4620 3172 * * 1485 4829 * * * * 16 89 * 4065 * * * * 4252 0 0 Y 17 1306 * 4537 4409 * 3608 * * * * * * 3423 * * * 4000 4207 * 2228 17 0 * * * * 0 * 4158 0 1000 V 18 4179 * * * 4133 * * 2578 * 4712 * * * * * * 2645 937 * * 18 0 * * * * * * 4274 0 0 V 19 3238 * * * * * * 1720 4535 * * * * * * * * 870 * * 19 0 * * * * * * 4422 0 0 E 20 2113 * 1900 1189 * 4001 * * * * * * * * * * * * * * 20 0 * * * * * * 4422 0 0 A 21 1094 * 4685 4282 3800 * * * * * 3650 4282 5033 * 3933 * 5036 4070 * 4253 21 0 * * * * * * 4414 0 0 I 22 2577 * * * 4253 * * 1749 * 4070 3800 * * * * 4600 * 1691 * * 22 0 * * * * * * 4414 0 0 I 23 2968 3933 4853 2430 * * * 3129 3411 3367 3469 * * * 5166 * 4253 3876 * 4554 23 0 * * * * * * 4414 0 0 Q 24 2492 * * 2091 * 4282 * 5036 3688 4282 * * * 3111 2958 3933 4955 4857 * * 24 45 5033 * 2000 415 * * 4414 1000 0 D 25 4282 * 682 3508 * * * * * 4499 * 4748 * 3933 * 4685 4282 * * * 25 130 4282 4853 2585 263 * * 4414 1000 0 N 26 * 4198 * * * * * 4783 3414 4453 * 639 * 4048 * * 3901 * * * 26 0 * * * * 0 * 4405 0 1000 P 27 * * 4282 * * * * * * * * * 147 * * * 4457 * * * 27 63 4554 * 1000 1000 * * 4414 1000 0 H 28 * * 1712 3672 * 1493 3549 * 4853 * * 4748 * 4253 * * 4282 * * * 28 119 3653 * 1000 1000 * * 4414 1500 0 A 29 2075 * * * * * * 4685 2580 * * * * 4602 * * * 956 * * 29 91 4035 * 1000 1000 * * 4414 1172 0 V 30 * * 4955 1919 * 4404 * * 2845 * * 4282 * 4457 3453 * 2022 3600 * * 30 179 3096 * 1000 1000 * * 4414 1842 0 V 31 4457 * * * * * * 1254 * 4282 * * * * * * * 1047 * * 31 0 * * * * * * 4414 0 0 Q 32 * * 4857 1856 * * 4511 3933 * 4404 * * * 3436 3374 4801 2301 3251 * * 32 107 3802 * 1000 1000 * * 4414 1490 0 H 33 * * 809 2556 * * 3712 * * * * * * * * * 3933 * * 3091 33 0 * * * * * * 4414 0 0 H 34 * * * * * * 4647 * 4004 4781 * 2205 * 4070 1275 4457 * * * 2987 34 0 * * * * * * 4414 0 0 P 35 4282 * 3033 * * 2158 4253 * * 5166 * 4602 1645 * 3388 * 3933 * * * 35 0 * * * * * * 4414 0 0 A 36 1884 4819 4511 * * 1953 * * * 4404 * * 4070 * * 3029 3084 4499 * * 36 0 * * * * * * 4414 0 0 M 37 * * * * 2339 * * * * 3102 2590 * * * * * 4748 * * 1051 37 0 * * * * * * 4414 0 0 I 38 * * * * 4499 * * 1874 * 3933 * * * * * * * 1256 3172 3508 38 0 * * * * * * 4414 0 0 R 39 * * 3956 * * * * * 2411 4313 * * * * 740 * * * 4510 4194 39 0 * * * * * * 4500 0 0 I 40 * 4313 * * * * * 677 * 3374 * * * * * * * 2134 * * 40 0 * * * * * * 4500 0 0 E 41 4106 * 1930 1776 * * 3073 * 4510 * * 4612 * 3730 3956 * * 4500 * * 41 0 * * * * * * 4500 0 0 A 42 1304 * * * * 2308 4194 * * * * 4580 * * 3738 * 2395 4992 * * 42 0 * * * * * * 4500 0 0 E 43 * * 2369 1502 * * * * 3956 * * 3505 1998 * * * * 4309 * * 43 46 4992 * 0 * * * 4500 1000 0 K 44 * * 3956 3584 * 1227 * * 4687 * * 4309 * 4886 2017 4194 * * * * 44 0 * * * * * * 4500 0 0 R 45 * * 4534 2285 4612 4580 * * 2726 4905 3444 4654 * * 1861 * 4811 4580 * * 45 0 * * * * * * 4500 0 0 L 46 * 3745 * * 3019 * * 2425 * 781 4886 * * * * * * * * * 46 0 * * * * * * 4500 0 0 E 47 * * * 2236 * * * 2186 * * * * * * 1718 4588 * 2168 * * 47 0 * * * * * * 4500 0 0 I 48 * * * * 2104 * * 2035 * 1646 * * * * * * * 2294 * * 48 0 * * * * * * 4500 0 0 R 49 * * 1722 * * * 4886 * 3838 * * 3202 4313 * 1986 * 2459 * * * 49 0 * * * * * * 4500 0 0 R 50 * 4510 * * 3296 * * * * 3440 2326 * * 4654 1223 4500 * * * 4309 50 0 * * * * * * 4500 0 0 E 51 2188 * 1700 2277 * * * * 3354 * * * * * * 3539 4612 4588 * * 51 0 * * * * * * 4500 0 0 T 52 3956 * * 1769 * * * * * * * 4905 * * 4194 2313 1685 4580 * * 52 0 * * * * * * 4500 0 0 V 53 * * * * * * * 1533 * 1757 3616 * * * * * * 1852 * * 53 0 * * * * * * 4500 0 0 E 54 4992 * * 1161 * 3956 * * * * * * * 4654 4580 2033 3527 4500 * * 54 0 * * * * * * 4500 0 0 E 55 4654 * 2674 591 * * * * * * * * 4580 3354 * * * * * * 55 0 * * * * * * 4500 0 0 N 56 2241 * * 2440 3576 * * * * 2595 * 4687 * 3290 3208 * 5196 4580 * 4782 56 0 * * * * * * 4500 0 0 L 57 3555 * * * * * * 4580 * 369 4194 * * * * * 4502 * * * 57 81 4194 * 0 * * * 4500 1000 0 G 58 * * * * * 0 * * * * * * * * * * * * * * 58 0 * * * * * * 4500 0 0 R 59 * * * * 4743 * 4580 * 2473 * * * * 4309 676 3956 * * * * 59 0 * * * * * * 4500 0 0 A 60 4687 * 2676 3055 * * * * * * * * 1055 4510 3735 3573 * * * * 60 0 * * * * * * 4500 0 0 W 61 * * * * 1297 * * 4194 * 4313 2896 * * * * * * 3555 3215 2636 61 0 * * * * * * 4500 0 0 D 62 * * 2128 3040 * 4743 * * 3938 * * 3294 4612 * 3169 4905 2208 4534 * * 62 0 * * * * * * 4500 0 0 V 63 3838 * * * 4500 3122 * * * 2253 2315 * * * * * 4811 1623 * * 63 65 4500 * 0 * * * 4500 1000 0 Q 64 2594 * * 3838 4580 3339 3177 * * * * 4886 * 2520 * 2345 * * * 3206 64 0 * * * * * * 4500 0 0 E 65 4534 * 2109 1514 * * * 3527 * * 4896 * * 3340 4313 * 4612 3956 * * 65 0 * * * * * * 4500 0 0 M 66 * * * * 1307 * * 2977 * 1595 4687 * * * * * * 4500 4194 * 66 0 * * * * * * 4500 0 0 L 67 * * * 949 * * 4909 * * 1929 4580 * * 2794 * * * * * * 67 0 * * * * * * 4500 0 0 V 68 4534 * * 2715 * * * 3290 * 3317 * * 3030 * * * * 1060 * * 68 0 * * * * * * 4500 0 0 D 69 3596 * 3101 4534 * * 3956 2613 * * * 1661 * * * 3203 * 3253 * * 69 0 * * * * * * 4500 0 0 V 70 * * * * * * * 4811 * 1851 1177 * * * * 4309 3838 3005 * * 70 0 * * * * * * 4500 0 0 I 71 3337 * * * * * * 3794 * * * * 3771 * * 1136 2464 3065 * * 71 0 * * * * * * 4500 0 0 T 72 3539 * * * * 4612 * * * * * * * * * 1085 1316 * * * 72 0 * * * * * * 4500 0 0 I 73 * * * * 1269 * 2170 4687 * 3691 * * * * * * 3545 * * 2636 73 0 * * * * * * 4500 0 0 G 74 2023 * * * * 3670 * 3545 4534 * * * * * * 3691 * 3539 * 1384 74 0 * * * * * * 4500 0 0 G 75 * * * * * 0 * * * * * * * * * * * * * * 75 0 * * * * * * 4500 0 0 N 76 * * * * * * 3648 * 4500 * * 3794 * 3444 490 * * * * * 76 0 * * * * * * 4500 0 0 V 77 2391 * * * * * * 1536 * 4654 1707 * * * * * * 3076 * * 77 41 5160 * 1000 1000 * * 4500 1000 0 D 78 3956 * 2475 2420 * * * * 4580 * * * * 5053 2885 4534 * 2104 * 3545 78 60 4612 * 0 * * * 4500 1000 0 E 79 5053 * * 2475 * * 3510 * * * 3956 4580 * 4580 3838 3099 2669 2249 * * 79 52 4811 * 0 * * * 4500 1000 0 D 80 * * 1872 4313 * 3938 * * 4588 2925 4654 4905 * * * 3573 2245 3838 * * 80 0 * * * * * * 4500 0 0 D 81 * * 437 5053 * 2632 * * * * * * * 5160 4580 * * * * * 81 0 * * * * * * 4500 0 0 D 82 * * 687 3656 * * 4383 5126 * * * 2483 * * * 4502 * * * * 82 0 * * * * * * 4491 0 0 R 83 4173 * * 1704 * 4078 * * 2945 * * 3750 * 3830 2560 3253 * * * 5083 83 0 * * * * * * 4489 0 0 F 84 * * * * 1240 * * 2294 * 4561 4426 * * * * * 2579 5083 3521 * 84 0 * * * * * * 4489 0 0 V 85 * * * 3929 * * * 2269 * 4256 * * * * * 3961 3116 1015 * * 85 0 * * * * * * 4224 0 0 L 86 * * * * 3890 * * 1399 * 1323 3943 * * * * * * * 3497 * 86 0 * * * * * * 4033 0 0 E 87 * * * 3026 * * * * 3024 * * * * 3213 * 3092 2242 * * 1654 87 0 * * * * * * 2917 0 0 W 88 * * * * * * * * * 2556 * * * * * * 2242 * 1087 2760 88 0 * * * * * * 2917 0 0 K 89 * * * 2448 * * * * 926 * * 2790 * * * 2775 * * * * 89 0 * * * * * * 2899 0 0 N 90 * * * * * * 942 * * * * 2061 * 2061 * * * * * * 90 0 * * 0 * * * 2187 0 0 //