HHsearch 1.5 NAME c9y46C_ FAM FILE c9y46C_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9y46C_.a3m DATE Sat Nov 1 09:40:54 2025 LENG 109 match states, 109 columns in multiple alignment FILT 116 out of 243 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.1 EVD 0.4320 -0.0525 SEQ >ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHCCHHHHHHHCCEECCCCCCCC CCCHHHHCC >ss_conf 9655223311016424799999998618630112234899999999999999999999988664971305999999862797788873670025898587 523876189 >Consensus xxxxxxsxsxraxlxFPvsRIkrilkxxxxxxrisxxAxvxlaaalEyfxxellexAxxxaxxxxrkxIxpxhixxAvxxdxxlxfLxxxvxixxggvxP xxxxxlxxx >c9y46C_ ARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLP NIQAVLLPK >UniRef50_P40096(47-137:142) Negative cofactor 2 complex subunit alpha n=9 Tax=Saccharomycetaceae RepID=NCB1_YEAST E=3e-12 s/c=0.80 id=26% cov=79% ---------------FPPAKVKKIMQTDEDIGKVSQATPVIAGRSLEFFIALLVKKSGEMARGQGTKRITAEILKKTILNDEKFDFLREGLCVEEGQTQP --------- >UniRef50_P26675(141-236:1596) Protein son of sevenless n=15 Tax=Eumetazoa RepID=SOS_DROME E=4e-12 s/c=0.75 id=26% cov=89% AKEVINSKKRKSVL--PTEKVHTLLQKDVLQYKIDSSVSAFLVAVLEYISADILKMAGDYVIKIAHCEITKEDIEVVMNADRVLMDMLNQ---SEAHILP S-------- >UniRef50_Q58CM8(68-163:195) Nuclear transcription factor Y subunit C-10 n=3 Tax=Arabidopsis thaliana RepID=NFYCA_ARATH E=2e-13 s/c=0.80 id=20% cov=83% ----------------PLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTLRAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRVpfgphCVTH QGVQPPAEMIL--- >UniRef50_C5MET3(94-181:275) Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MET3_CANTT E=2e-09 s/c=0.73 id=20% cov=82% ---------SQSNLTLPIARIKRIFKLDPDYAGASASAVYTAGLATELFVQYFVEQASLLAKMDKRKKIQYKDFANAVSAHDSLNFL--------SDTVP KTHPI---- >UniRef50_Q9V452(9-97:140) Chrac-16 n=12 Tax=Drosophila RepID=Q9V452_DROME E=0.0004 s/c=0.52 id=15% cov=82% ----PVERPPTAETFLPLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLAGAAYTEEfGQRPGEALKYEHLSQVVNKNKNLEFLLQIVP------- ---------- >UniRef50_Q584G0(172-248:312) Putative uncharacterized protein n=2 Tax=Trypanosoma brucei RepID=Q584G0_9TRYP E=4e-07 s/c=0.73 id=18% cov=50% ---------------FALSRVRELLKFHSNSTIVSKDAVTTASEAVVLILQDLTRMAAAQAERNNRKTV------------------------------- --------- >UniRef50_A8QE09(80-151:297) Transcription regulator NC2 alpha chain-human, putative n=1 Tax=Brugia malayi RepID=A8QE09_BRUMA E=5e-05 s/c=0.68 id=23% cov=55% -------------------RVKRVMQSDDEIGRMVASVPVAVGRAMEHFAEKLLETAAQCVLYSSSRTLSPSHIKQAV---------------------- --------- >UniRef50_C5WS18(226-320:337) Putative uncharacterized protein Sb01g000900 n=1 Tax=Sorghum bicolor RepID=C5WS18_SORBI E=0.0004 s/c=0.48 id=26% cov=80% -KKKRKDQKAAAAdmgvCSFPMARVRQLMRVEDATIRVSSDAVFLINKASEFFLGKFAEDAYRNAVKDRKKSIIYDNLSTAVCSQKGLKFL--------- ------------- >UniRef50_C4Q9W7(14-87:92) Histone-like transcription factor ccaat-related n=2 Tax=Schistosoma RepID=C4Q9W7_SCHMA E=6e-05 s/c=0.66 id=18% cov=61% -------------IKLPLSRVKIIVKTVPSVSLVTSEALVSIGFLCEQFIQEFCQSVVEVTAQEGKKTVTKQHVQSAVQ--------------------- --------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 2465 0 0 R 2 * * * * * 4412 * * 1183 * * * * 3607 1216 * * * * * 2 0 * * * * * * 4467 0 0 A 3 2510 * 5059 4613 * 3251 * * 3204 * * 4317 * 4680 2780 2060 4920 4944 * * 3 0 * * * * * * 4917 0 0 K 4 2803 * 4983 4714 * * * 4983 1086 * 4055 4929 * 5036 3385 * * 4825 5069 * 4 0 * * * * * * 4971 0 0 A 5 5331 4491 * * * * * 3841 2166 3069 6249 5387 2472 * 2127 5968 4841 5522 * * 5 0 * * * * * * 5321 0 0 K 6 4393 * * 2738 * * 5878 5790 2402 * 4155 4657 5749 3107 2902 4146 * 2665 * * 6 0 * * * * * * 5330 0 0 T 7 4002 * 4828 4999 * 4492 * * 3714 5587 * * 5776 5267 * 888 2784 * * * 7 0 * * * * * * 5301 0 0 R 8 5640 * * 4535 * 3826 4860 * 1763 5031 * * 4986 3472 1630 * 4016 * * * 8 27 * 5751 * * * * 5285 0 0 S 9 4065 * * * * * * 5103 2345 5392 * * 3822 5139 4714 952 4787 * * * 9 0 * * * * 0 * 5394 0 1000 S 10 2274 * 4426 5698 * * * * 3132 5795 * 4906 4682 3341 3970 2030 4065 4159 * * 10 0 * * * * * * 5507 0 0 R 11 5034 * * 5992 5808 5142 * * 1526 4441 * * * 4921 1141 * 5162 * * * 11 15 * 6596 * * * * 5507 0 0 A 12 993 5740 * * * 3706 * * 4256 4783 * 4555 5100 * * 2443 5848 * * 4617 12 0 * * * * 0 * 5559 0 1000 G 13 4968 * 4651 2319 * 1407 5065 * 3853 * * 3543 5089 5817 * 4173 4386 6015 * * 13 64 4530 * 1911 446 * * 5681 2183 0 L 14 5523 5324 * * * * 6833 3275 6177 676 4436 6407 * * * 5004 4160 4648 * 5907 14 20 * 6148 * * * * 5881 0 0 Q 15 4653 * * * 4345 5804 5027 3312 3562 4271 6462 5007 * 2059 4092 3519 3098 3640 * * 15 27 5779 * 527 1709 * 0 5900 1647 1000 F 16 5323 * * * 553 * * 5239 * 2042 * * * * * * * 5372 * * 16 0 * * * * 0 * 6126 0 1000 P 17 5104 5430 * * * * 6395 6215 5996 * * * 349 * 6236 3364 6470 * * * 17 0 * * * * * * 6366 0 0 V 18 5043 5931 * * * * 6382 2792 6790 2618 3453 * 4047 * * 7119 4095 1296 * * 18 0 * * * * * * 6497 0 0 G 19 1866 6673 4327 5454 * 2207 * * 5940 * * 4444 * * * 1660 4383 * * * 19 0 * * * * * * 6496 0 0 R 20 * 6346 * 5633 * * 6941 * 3095 5165 * 6198 * 4172 457 * * * * 5909 20 0 * * * * * * 6495 0 0 V 21 5633 * * * 3827 * * 1155 * 5402 4782 * * * * * 5048 1434 * * 21 0 * * * * * * 6495 0 0 H 22 5620 * 4498 2709 4695 5317 2708 * 1448 * * * * * 2689 5944 * * * 5168 22 0 * * * * * * 6495 0 0 R 23 5958 * * 4970 * * 4902 5322 2021 * * 4533 5683 4963 1132 4823 4582 6855 * 6591 23 18 6346 * 0 * * * 6495 1000 0 L 24 6327 5866 * * 5208 * 5139 1253 5975 2161 4910 * * 6370 6626 5099 * 4361 4018 4035 24 13 * 6795 * * * * 6495 0 0 L 25 * 6483 * * 5488 * * 3075 * 1234 1568 * * * * * 5961 3843 * * 25 15 * 6622 * * * 0 6735 0 1000 R 26 6916 * * * * 5914 5361 * 1194 5894 * 6165 * 2276 2162 6481 5547 5607 * * 26 0 * * * * 0 * 6736 0 1673 K 27 3392 7781 4077 2466 5776 5491 6098 5382 2721 4034 5570 5826 * 4223 4574 2869 4104 5214 * 6394 27 70 5512 5301 629 1500 * * 6497 1742 0 G 28 4244 * 1440 3686 * 2196 5727 4741 5690 5331 5329 4779 * * 4173 5203 5340 6191 * * 28 0 * * * * 0 * 6463 0 1704 N 29 6064 4737 3496 2911 * 5909 5226 4253 4214 5401 6615 3767 3391 3841 2775 3788 4141 5128 * * 29 0 * * * * * * 6497 0 0 Y 30 6601 * 1808 3774 5094 5132 4434 5503 5963 3456 5838 4593 4663 * 5830 4728 4536 4616 * 2643 30 29 7547 6098 0 * * * 6497 1000 0 A 31 2725 4283 5494 6987 5906 4138 4676 3044 6368 5809 * 5389 * 4588 5565 2755 4568 2296 * 5443 31 0 * * * * 0 * 6472 0 1000 E 32 5299 5898 4438 4741 4831 2692 4497 5500 2765 6062 4465 4985 4948 5120 3307 4114 5150 4647 4891 4125 32 61 4594 * 576 1602 * * 6749 2521 0 R 33 * 4240 * * 5564 5508 5668 4467 2467 4023 3511 5378 * 4994 1378 5285 6087 * 6526 5825 33 0 * * * * * * 6749 0 0 V 34 5850 3651 * * 5509 * * 1544 * 2736 4671 * 7048 * 6637 6371 5632 1742 * * 34 0 * * * * * * 6755 0 0 G 35 3508 * 4063 7032 * 2635 5084 * 6027 * 6852 4162 * 5893 * 1041 4501 6559 * 5908 35 10 * 7210 * * * * 6762 0 0 A 36 2323 7049 4160 4501 * 6916 6772 5836 3724 6016 * 3952 6287 2634 5474 2098 5284 4827 * 6512 36 0 * * * * 0 * 6676 0 1000 G 37 3142 * 2666 2621 * 3637 6439 * * 6615 5100 4186 4849 4918 * 2483 3345 7268 * 5106 37 15 6643 * 4954 47 * * 6774 1000 0 A 38 811 6014 * * * 6081 * * * 5844 6757 * * * * 4838 2537 2593 * * 38 0 * * * * * * 6774 0 0 P 39 3001 6634 * * * 6456 * 6603 * 3411 6857 6054 1300 5329 * 2945 4914 3075 * 6274 39 0 * * * * * * 6681 0 0 V 40 4288 * 5994 6096 3139 * 5182 2743 5350 3480 6379 * 5708 * * 7325 5921 1245 * 4709 40 0 * * * * * * 6681 0 0 Y 41 3767 6570 * * 2692 * * 3840 * 2233 6194 * 7325 * * 5016 4643 3866 * 1647 41 0 * * * * * * 6681 0 0 L 42 4100 6700 * * 4356 * * 2213 * 1331 3905 * * * * 5916 5219 2644 * * 42 10 7235 * 3000 193 * * 6681 1000 0 A 43 1417 5682 * * * 3313 * 5187 * 5994 * 4037 * * * 2233 2735 4698 * * 43 0 * * * * * * 6681 0 0 A 44 1226 * 5193 5921 5448 4750 * 6479 2347 4524 * 6442 * 5612 3250 6720 5352 4730 * 6826 44 0 * * * * * * 6681 0 0 V 45 1372 4339 * * 6439 5706 * 3346 * 4528 4883 * 5957 * * 4475 5042 1908 * * 45 0 * * * * * * 6722 0 0 L 46 3796 3465 * * * * * 3545 * 1101 4551 * * * * 5640 2577 4178 * * 46 0 * * * * * * 6722 0 0 E 47 6132 * 4895 268 * * * * 5320 * 6499 5772 * 4290 * * * 5934 * * 47 0 * * * * * * 6722 0 0 Y 48 6535 * 6252 6592 3892 * 6606 4696 4915 1976 4187 4125 * 6281 * 6683 * * 6448 1265 48 0 * * * * * * 6725 0 0 L 49 * * * * 1077 * * 3527 * 1397 5571 * * * * * * 4706 * * 49 0 * * * * * * 6725 0 0 T 50 3539 6134 * * * * * 2236 * 2534 4909 * * * * 4141 2199 2272 * * 50 0 * * * * * * 6725 0 0 A 51 2088 5346 5284 2534 7073 4500 4725 6240 4396 4377 7270 * 5859 3260 4063 3520 4756 5586 * 6537 51 0 * * * * * * 6725 0 0 E 52 * * 3156 1323 6780 7205 4765 * 3761 5456 * 3812 * 4290 4723 3709 5899 * * 3550 52 15 * 6576 * * * * 6725 0 0 I 53 5622 * * * 3142 * * 2032 * 1312 5177 * * * * * 4706 2704 * * 53 0 * * * * * 0 6709 0 1000 L 54 3567 5681 * * 5807 * * 3428 * 1479 4255 7240 6735 * * 4345 2928 2648 5790 * 54 0 * * * * * 0 6611 0 1000 E 55 6203 * 3519 1196 * 4298 * 5339 3137 4682 6856 4597 * 4539 4752 5438 4016 * * 5678 55 0 * * * * * 0 6754 0 1000 L 56 4438 4789 4854 3142 * 4685 * 6158 3513 1724 3630 * * 3880 3293 5603 5859 5092 * 6829 56 0 * * * * * 0 6754 0 1000 A 57 879 * * * * 3922 * 5889 * * * * * 5442 * 2317 3267 4450 * * 57 32 6424 6625 0 * * 0 6755 1000 1000 G 58 3624 5193 5441 * 4721 1607 4881 5452 6489 4595 6141 5998 * * * 4388 * 3449 3417 2941 58 0 * * * * * 0 6743 0 1516 N 59 4502 * 4413 3433 * 5909 6082 5512 2728 4386 5073 1985 * 4192 5570 3850 3344 5403 * 6083 59 0 * * * * 621 1515 6743 0 1516 A 60 3398 4625 5350 2683 5105 6849 4937 3735 6789 4861 5563 4342 * 3874 5291 4555 4844 2783 * 3203 60 0 * * * * * 0 6755 0 1000 A 61 1177 5242 * 6347 * * * 5837 * 5537 5425 * 4637 * 4224 3827 2245 3615 * * 61 40 5209 * 716 1354 * 0 6777 2327 1000 R 62 4430 7077 4457 3620 * 5008 4876 5760 2222 6074 7415 4110 * 2933 2649 3468 * 4010 * * 62 0 * * * * * 0 6776 0 1000 D 63 3856 * 3595 3183 6501 4900 6478 4562 3112 4210 4430 3068 * 3822 4584 3058 4760 5631 * 6052 63 0 * * * * * 0 6776 0 1000 N 64 4872 6113 2918 4493 6842 6413 3832 3464 3474 5870 5885 2911 5422 4551 3471 2804 4901 * * 8115 64 0 * * * * * 0 6776 0 1000 K 65 6454 * 4753 * * 2842 4432 * 1594 5422 * 2981 6343 5191 2753 3977 4917 * * * 65 24 5927 * 1000 1000 * 0 6776 1244 1000 K 66 4110 5931 * 6694 * 5007 3840 * 2427 4668 6658 * 5932 4345 1498 3392 4336 6012 * * 66 99 4441 5636 547 1664 * 0 6815 2027 1000 T 67 5332 5664 * 4267 * 7060 * 5889 1163 * 5685 5024 * 4145 2837 4024 4195 5179 * 4567 67 33 5464 * 1639 559 * 0 6705 1625 1344 R 68 4778 5117 * 4027 5625 6834 * 4946 3910 4266 6537 4259 * * 1847 4171 2169 4618 * 4883 68 0 * * * * 621 1515 6705 0 1344 I 69 * * * * * * * 685 * 2174 5712 * * * * * * 2865 * * 69 15 * 6631 * * * 0 6780 0 1000 I 70 3924 * 6618 * * 5759 6603 4281 3633 4402 6421 3633 * 2825 4556 2613 2020 5065 * * 70 0 * * * * 633 1493 6791 0 1396 P 71 4272 * * 6159 * 5181 * * 3562 4393 * 6388 1188 5514 4533 4777 6922 6796 * 2289 71 0 * * * * * 0 6637 0 1000 R 72 5219 4915 4046 2618 7323 6641 6603 6154 2839 6582 * 4625 6124 2842 2186 3893 6472 5320 * 6969 72 0 * * * * * 0 6637 0 1000 H 73 * * 1600 * 5197 * 1069 5781 5317 4481 6794 6337 * 5230 * * 5056 * * * 73 0 * * * * * 0 6637 0 1000 L 74 * 5317 * * 5127 * * 1442 5230 1577 4334 * * * * * * 2583 * * 74 0 * * * * * 0 6637 0 1000 Q 75 3058 4445 4133 4170 5744 7811 5216 5613 2376 4527 5207 4872 * 3683 4504 2656 4324 5424 * * 75 0 * * * * 0 * 6615 0 1000 L 76 5162 * 6290 3360 * * * 4987 3359 2273 4685 4313 * 3260 3883 2843 4418 4284 5872 6615 76 0 * * * * * * 6646 0 0 A 77 676 3752 * 6296 * 4496 6127 * * * * * 5245 * * 4265 4950 3087 * * 77 36 * 5343 * * * * 6646 0 0 I 78 6713 * * * 5892 * * 1414 * 4250 3742 * 6378 * * 6266 4705 1295 * * 78 18 6310 * 0 * 0 * 6551 1000 1000 R 79 3568 3697 5239 4446 5206 4866 4332 * 3381 4159 * 3583 * 3816 2288 3850 6450 5420 * 4648 79 0 * * * * * * 6637 0 0 N 80 3530 6465 6852 7237 * 4285 4250 * 3066 * 5081 1946 5332 3703 5057 2542 3814 * * * 80 15 * 6561 * * * * 6609 0 0 D 81 * * 1110 4281 * * 4410 4754 6565 * * 2411 * 4673 5656 3813 3881 * * 7816 81 0 * * * * 0 * 6574 0 1000 E 82 5035 * 2759 1938 * 5777 * 5475 3067 4540 5383 4125 2880 4964 4955 5417 5550 4982 * * 82 0 * * * * * * 6609 0 0 E 83 * * 4393 1862 5324 5478 5127 5520 3960 5541 5328 4592 4837 3620 3612 4591 3921 3433 * 5095 83 0 * * * * * * 6604 0 0 L 84 * * * * 1931 * 6183 * * 763 5625 * * * * 6258 6587 5690 * 3802 84 0 * * * * * * 6604 0 0 N 85 4665 5183 1858 3131 * 5412 3755 * 5157 5324 4477 2806 * 5625 4923 3182 5626 * 5567 * 85 0 * * * * * * 6609 0 0 K 86 6319 6852 3548 5132 1085 6428 6176 * 4690 6864 6779 5615 6173 2822 5934 3723 5551 * 6411 6555 86 0 * * * * * * 6615 0 0 L 87 6368 * * * 5275 * * 5477 * 266 4098 * * * * * * 4333 * * 87 106 5823 4228 1585 585 * * 6615 1000 0 L 88 4593 6436 * 5639 1644 5632 * 2991 * 1983 5970 6180 * * 4617 6606 * 3561 * 4555 88 43 * 5102 * * * 0 6185 0 1787 G 89 4365 * 2623 4199 * 3306 4325 * 1840 * * 3027 * 3561 4425 5033 5656 * * * 89 71 5835 5039 0 * 1118 891 6149 1000 2466 K 90 4892 * 2575 5741 4825 3278 3835 4219 3987 5786 5637 3906 6057 4589 3441 3173 4312 4652 * * 90 35 * 5374 * * 1800 488 6077 0 2588 V 91 4370 5812 * * * 3848 5264 2878 * 3880 * 5554 * * * * 3275 1049 5243 * 91 29 5627 * 2322 322 * 0 5822 1000 2859 T 92 4358 3645 * * * * 4565 2934 * 5147 * * 2242 * * * 1328 4055 * * 92 37 * 5293 * * * 0 5714 0 2859 I 93 * 4297 * * 5214 4713 * 867 4330 2822 * * * * * 5516 * 3025 * * 93 0 * * * * 1404 685 5518 0 3063 A 94 2340 5359 5029 4667 * * 3888 * 4904 * * * 2319 5042 5237 1727 4387 * * * 94 0 * * * * 1534 611 5456 0 2374 Q 95 4804 * * 2885 * 2781 4383 * * * * 3703 5552 1656 3820 3144 * * * 4795 95 75 4304 * 1000 1000 0 * 5357 1000 1787 G 96 3930 * * * * 426 * * * * * 4718 4927 4679 * 3637 * * * * 96 0 * * * * * * 5093 0 0 G 97 4079 * 3912 * * 515 4456 * * * * * * 4301 4669 4680 * * * * 97 47 4972 * 2585 263 * * 5093 1000 0 V 98 3694 * * * * 5135 * 4328 * * 4566 4620 * * 5199 * 2719 780 * * 98 0 * * * * * * 5043 0 0 L 99 * * * * 5456 * * 2519 3771 1581 5144 * 5279 3395 * 4708 5217 2466 * * 99 0 * * * * * * 5063 0 0 P 100 * * * * * * * * 5279 * * * 198 * * 3290 * * * * 100 45 5031 * 0 * * * 5063 1000 0 N 101 * 5434 * 4407 4045 * 3169 4713 2801 * * 3379 3667 * 2571 2960 5360 * * 3638 101 0 * * * * * * 4802 0 0 I 102 3955 * * * * * * 878 * 3252 * * 4999 * * 4074 2970 3874 * * 102 0 * * * * * * 4441 0 0 Q 103 4003 * * 3692 * * 1102 * * 4010 * 3523 * 2683 4776 4237 * * * * 103 0 * * * * * * 4288 0 0 A 104 4061 * * 4550 * * * * 2292 * 3671 * 1098 4798 3933 4437 * * * * 104 0 * * * * * * 4290 0 0 V 105 2532 * * 2798 * * * 2441 * * * * 4610 * * 1942 * 2337 * * 105 0 * * * * * * 4101 0 0 L 106 * * * * * * * * * 0 * * * * * * * * * * 106 0 * * * * * * 3469 0 0 L 107 * * * * 3459 * * * * 285 * * * * * 3501 * * * * 107 0 * * * * * * 2827 0 0 P 108 1654 * 2970 * * * * * 2730 * * * 1308 * * * * * * * 108 0 * * * * * * 2359 0 0 K 109 * * * * * * * * 676 * * * * * 1418 * * * * * 109 0 * * 0 * * * 2236 0 0 //