HHsearch 1.5 NAME c9vd9A_ FAM FILE c9vd9A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9vd9A_.a3m DATE Sat Jun 28 11:00:58 2025 LENG 32 match states, 32 columns in multiple alignment FILT 2 out of 4 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.1 EVD 0.4874 3.8006 SEQ >ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC >ss_conf 97533566612022578999999999704379 >Consensus axvwednwdddnveddfsxqlxaxlekhgykm >c9vd9A_ AHVWEDNWDDDNVEDDFSNQLRAELEKHGYKM >UniRef50_Q9VM46(49-73:79) Probable 26S proteasome complex subunit sem1 n=24 Tax=Eumetazoa RepID=SEM1_DROME E=0.0006 s/c=1.80 id=81% cov=81% -NVWEDNWDDDNVEDDFSQQLKAHLE------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 H 2 * * * * * * 1000 * * * * 1000 * * * * * * * * 2 0 * * * * * * 1117 0 0 V 3 * * * * * * * * * * * * * * * * * 0 * * 3 0 * * * * * * 1117 0 0 W 4 * * * * * * * * * * * * * * * * * * 0 * 4 0 * * * * * * 1117 0 0 E 5 * * * 0 * * * * * * * * * * * * * * * * 5 0 * * * * * * 1117 0 0 D 6 * * 0 * * * * * * * * * * * * * * * * * 6 0 * * * * * * 1117 0 0 N 7 * * * * * * * * * * * 0 * * * * * * * * 7 0 * * * * * * 1117 0 0 W 8 * * * * * * * * * * * * * * * * * * 0 * 8 0 * * * * * * 1117 0 0 D 9 * * 0 * * * * * * * * * * * * * * * * * 9 0 * * * * * * 1117 0 0 D 10 * * 0 * * * * * * * * * * * * * * * * * 10 0 * * * * * * 1117 0 0 D 11 * * 0 * * * * * * * * * * * * * * * * * 11 0 * * * * * * 1117 0 0 N 12 * * * * * * * * * * * 0 * * * * * * * * 12 0 * * * * * * 1117 0 0 V 13 * * * * * * * * * * * * * * * * * 0 * * 13 0 * * * * * * 1117 0 0 E 14 * * * 0 * * * * * * * * * * * * * * * * 14 0 * * * * * * 1117 0 0 D 15 * * 0 * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1117 0 0 D 16 * * 0 * * * * * * * * * * * * * * * * * 16 0 * * * * * * 1117 0 0 F 17 * * * * 0 * * * * * * * * * * * * * * * 17 0 * * * * * * 1117 0 0 S 18 * * * * * * * * * * * * * * * 0 * * * * 18 0 * * * * * * 1117 0 0 N 19 * * * * * * * * * * * 1000 * 1000 * * * * * * 19 0 * * * * * * 1117 0 0 Q 20 * * * * * * * * * * * * * 0 * * * * * * 20 0 * * * * * * 1117 0 0 L 21 * * * * * * * * * 0 * * * * * * * * * * 21 0 * * * * * * 1117 0 0 R 22 * * * * * * * * 1000 * * * * * 1000 * * * * * 22 0 * * * * * * 1117 0 0 A 23 0 * * * * * * * * * * * * * * * * * * * 23 0 * * * * * * 1117 0 0 E 24 * * * 1000 * * 1000 * * * * * * * * * * * * * 24 0 * * * * * * 1117 0 0 L 25 * * * * * * * * * 0 * * * * * * * * * * 25 0 * * * * * * 1117 0 0 E 26 * * * 0 * * * * * * * * * * * * * * * * 26 0 * * * * * * 1117 0 0 K 27 * * * * * * * * 0 * * * * * * * * * * * 27 0 * * * * * * 1000 0 0 H 28 * * * * * * 0 * * * * * * * * * * * * * 28 0 * * * * * * 1000 0 0 G 29 * * * * * 0 * * * * * * * * * * * * * * 29 0 * * * * * * 1000 0 0 Y 30 * * * * * * * * * * * * * * * * * * * 0 30 0 * * * * * * 1000 0 0 K 31 * * * * * * * * 0 * * * * * * * * * * * 31 0 * * * * * * 1000 0 0 M 32 * * * * * * * * * * 0 * * * * * * * * * 32 0 * * 0 * * * 1000 0 0 //