HHsearch 1.5 NAME c9sytD_ FAM FILE c9sytD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9sytD_.a3m DATE Sat Jan 31 13:03:30 2026 LENG 36 match states, 36 columns in multiple alignment FILT 2 out of 4 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.4 EVD 0.4807 3.0321 SEQ >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >ss_conf 935799999999701689999986545778740259 >Consensus twxplvxxvvxxvggfxvxrirgxfgsxxxpsyxxs >c9sytD_ TWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSCT >UniRef50_A0PQX3(21-55:156) Conserved membrane protein MmpS4 n=5 Tax=Mycobacterium RepID=A0PQX3_MYCUA E=1e-08 s/c=1.75 id=53% cov=100% -WLPLVLAVVFAVGGFAVSRVRGMFGSQQLPTYADS # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * * 0 * * * 1 0 * * * * * * 1000 0 0 W 2 * * * * * * * * * * * * * * * * * * 0 * 2 0 * * * * * * 1373 0 0 I 3 * * * * * * * 1000 * 1000 * * * * * * * * * * 3 0 * * * * * * 1373 0 0 P 4 * * * * * * * * * * * * 0 * * * * * * * 4 0 * * * * * * 1373 0 0 L 5 * * * * * * * * * 0 * * * * * * * * * * 5 0 * * * * * * 1373 0 0 V 6 * * * * * * * * * * * * * * * * * 0 * * 6 0 * * * * * * 1373 0 0 I 7 * * * * * * * 1000 * 1000 * * * * * * * * * * 7 0 * * * * * * 1373 0 0 L 8 1000 * * * * * * * * 1000 * * * * * * * * * * 8 0 * * * * * * 1373 0 0 V 9 * * * * * * * * * * * * * * * * * 0 * * 9 0 * * * * * * 1373 0 0 V 10 * * * * * * * * * * * * * * * * * 0 * * 10 0 * * * * * * 1373 0 0 V 11 * * * * 1000 * * * * * * * * * * * * 1000 * * 11 0 * * * * * * 1373 0 0 I 12 1000 * * * * * * 1000 * * * * * * * * * * * * 12 0 * * * * * * 1373 0 0 V 13 * * * * * * * * * * * * * * * * * 0 * * 13 0 * * * * * * 1373 0 0 G 14 * * * * * 0 * * * * * * * * * * * * * * 14 0 * * * * * * 1373 0 0 G 15 * * * * * 0 * * * * * * * * * * * * * * 15 0 * * * * * * 1373 0 0 F 16 * * * * 0 * * * * * * * * * * * * * * * 16 0 * * * * * * 1373 0 0 T 17 1000 * * * * * * * * * * * * * * * 1000 * * * 17 0 * * * * * * 1373 0 0 V 18 * * * * * * * * * * * * * * * * * 0 * * 18 0 * * * * * * 1373 0 0 H 19 * * * * * * 1000 * * * * * * * * 1000 * * * * 19 0 * * * * * * 1373 0 0 R 20 * * * * * * * * * * * * * * 0 * * * * * 20 0 * * * * * * 1373 0 0 I 21 * * * * * * * 1000 * * * * * * * * * 1000 * * 21 0 * * * * * * 1373 0 0 R 22 * * * * * * * * * * * * * * 0 * * * * * 22 0 * * * * * * 1373 0 0 G 23 * * * * * 0 * * * * * * * * * * * * * * 23 0 * * * * * * 1373 0 0 F 24 * * * * 1000 * * * * * 1000 * * * * * * * * * 24 0 * * * * * * 1373 0 0 F 25 * * * * 0 * * * * * * * * * * * * * * * 25 0 * * * * * * 1373 0 0 G 26 * * * * * 0 * * * * * * * * * * * * * * 26 0 * * * * * * 1373 0 0 S 27 * * * * * * * * * * * * * * * 0 * * * * 27 0 * * * * * * 1373 0 0 E 28 * * * 1000 * * * * * * * * * 1000 * * * * * * 28 0 * * * * * * 1373 0 0 N 29 * * * * * * * * * * * 1000 * 1000 * * * * * * 29 0 * * * * * * 1373 0 0 R 30 * * * * * * * * * 1000 * * * * 1000 * * * * * 30 0 * * * * * * 1373 0 0 P 31 * * * * * * * * * * * * 0 * * * * * * * 31 0 * * * * * * 1373 0 0 S 32 * * * * * * * * * * * * * * * 1000 1000 * * * 32 0 * * * * * * 1373 0 0 Y 33 * * * * * * * * * * * * * * * * * * * 0 33 0 * * * * * * 1373 0 0 S 34 1000 * * * * * * * * * * * * * * 1000 * * * * 34 0 * * * * * * 1373 0 0 C 35 * 1000 1000 * * * * * * * * * * * * * * * * * 35 0 * * * * * * 1373 0 0 T 36 * * * * * * * * * * * * * * * 1000 1000 * * * 36 0 * * 0 * * * 1373 0 0 //