HHsearch 1.5 NAME c9rtoA_ FAM FILE c9rtoA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9rtoA_.a3m DATE Sat Jul 26 11:55:03 2025 LENG 115 match states, 115 columns in multiple alignment FILT 102 out of 129 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.0 EVD 0.4174 -0.2205 SEQ >ss_pred CCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEEEE EECCCCCEEEEEEEC >ss_conf 9727988552888304897899999458886069878983789851666573212673199999906778862898677156899997089864247519 982886145446509 >Consensus xPlTtHVLDtxxGxPAagvxvxLxxxxxxxxwxxixxxxTdxDGRixxlxxxxxxxxGxYxlxFxtxxYfxxxgxxxFxpxVxVxFxixdxxxxHYHVPL LlSPxgYSTxxxxxx >c9rtoA_ CPLMVKVLDAVRGSPAINVAMHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAA LLSPYSYSTTAVVTN >UniRef50_C7QI65(3-105:132) Transthyretin n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QI65_CATAD E=1e-21 s/c=1.01 id=27% cov=90% --LSILVIDVAFGVPGAELSARL-RRRSEAGWQELSTGRTGGDGRLE--LHPAPAGRGTYQLVFDLDGYYHGLGSVPLHPRAIVEFRVTDA-HKDLQLAL FISPHSFCT------ >UniRef50_Q8ZQ52(28-132:136) 5-hydroxyisourate hydrolase n=45 Tax=Proteobacteria RepID=HIUH_SALTY E=1e-36 s/c=1.46 id=30% cov=92% --LSVHILDQQTGKPAPGVEVVLEQKK-DNGWTQLNTGHTDQDGRIKALWPEKAAAPGDYRVIFKTGQYFESKKLDTFFPEIPVEFHISK-TNEHYHVPL LLSQYGYST------ >UniRef50_UPI00015B40CF(366-474:480) PREDICTED: similar to ENSANGP00000020773 n=1 Tax=Nasonia vitripennis RepID=UPI00015B40CF E=1e-30 s/c=1.23 id=25% cov=93% -PIvSTHVLETSKGIPVCGLQVSLYKLQ-DGRWTFVHESITTANGFCNDFSscAKNSLTTGRYKFHYDVEKYYNMRKQATIYPFIEIVFDIKDPNAS-YH IPLLVSPFSYST------ >UniRef50_B4ECA7(60-168:173) Transthyretin-like protein n=4 Tax=Burkholderiaceae RepID=B4ECA7_BURCJ E=1e-20 s/c=0.92 id=20% cov=91% --LTIHLLDTYHGAPAVGMHVE-FSRIEKGEPVSIRTAVLNRSGRTDaPLLIGDTYVAGDYELLMRVDDYFRTKGVrlpsPAFLSEVPIRFRITDASVR- LHLPVQFGPWNYT------- >UniRef50_Q4K4N1(5-110:116) Transthyretin family protein, putative n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K4N1_PSEF5 E=6e-16 s/c=0.80 id=26% cov=89% --LSIHVVDVASGKVAEGMAVRVRRLGG----ELLCAGRIAGNGLLSELAERmASFGQGVYEVELEVAAFYREQGQAlppvPFLEVLVYRFGLDDP-RQH YHLPFKLTAWGVS------- >UniRef50_C0NV24(6-189:193) Transthyretin domain-containing protein n=5 Tax=Ajellomyces RepID=C0NV24_AJECG E=2e-19 s/c=0.53 id=22% cov=95% -PITCHILNTFNGTPAPGLACTLTLHSillpagapQPANLPATLHAVTDVDGRIKHWHPPPHPpssattttatttttspaatgtgtgtgtgtgttssaaa dttatpapgpsirsllasiheqrggqQRSIWTLRIrNVGEWYAEQGVESFWREIEVQFLVKGSerwdGWRHYHVPVLLGPWNYTT------ >UniRef50_C6YV00(4-99:113) Predicted protein n=2 Tax=Francisella philomiragia RepID=C6YV00_9GAMM E=3e-12 s/c=0.76 id=13% cov=78% --ISCHILDSTFGKNASEITVTLRSLNNN---EQIFVTNATSDGRIKESFESQESQ--LFELNIASNDFLKEYSNMDFsiIPDIPIKF-MTKKQNSHYH- ----------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * C 1 * 0 * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1615 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 4507 0 0 L 3 * * * * * * * 1164 * 989 * * * * * * * 4323 * * 3 18 6349 * 0 * * * 5163 1000 0 M 4 * 6388 * * * * * * * * 4597 * * * * 1087 1071 * * * 4 0 * * * * * * 5164 0 0 V 5 3627 2470 * * * * * 3715 * 5327 * * * * * 3801 1151 3116 * * 5 0 * * * * * * 5164 0 0 K 6 * * * * * * 198 * 4597 5722 * * * 5699 * 4700 6624 * * * 6 0 * * * * * * 5164 0 0 V 7 3069 * * * * * * 1607 * 5171 * * * * * * * 930 * * 7 31 5561 * 1000 1000 * * 5164 1000 0 L 8 * * * * * * * 4152 * 206 5854 * * * * * * 4067 * * 8 0 * * * * * * 5164 0 0 D 9 * * 300 6355 * * * * * * * 2815 * * * 6357 5561 * * * 9 0 * * * * * * 5164 0 0 A 10 3121 * * * * * * 3847 * 4044 5854 6446 * 4586 * 3470 971 3571 * * 10 0 * * * * * * 5164 0 0 V 11 2142 6597 5409 5172 4659 5260 4869 * * 5956 6292 5367 * 5889 * 2446 2334 2997 * 4839 11 0 * * * * * * 5164 0 0 R 12 5466 6552 5858 * 4735 5655 3534 6756 3692 3143 * 3895 * 4179 2470 3397 2575 5572 * 5699 12 0 * * * * * * 5164 0 0 G 13 * * * * * 0 * * * * * * * * * * * * * * 13 0 * * * * * * 5164 0 0 S 14 4456 4339 * 5916 * 5854 * 3799 1942 3607 * * * 5276 2183 4788 3074 4160 * * 14 0 * * * * * * 5164 0 0 P 15 4851 * * * * 6656 4965 * * * * 5748 206 * * 5699 * 5740 * * 15 31 * 5561 * * * * 5164 0 0 A 16 271 * * * * 3305 * * * * * * * * * 5636 * 4321 * * 16 33 5488 * 1000 1000 * 0 5122 1465 1000 I 17 1175 6253 * 3038 * 4871 7024 5974 4557 * 6781 * 4464 4726 5286 3071 4881 4814 * 5990 17 0 * * * * 0 * 5122 0 1000 N 18 6829 * 3324 4026 * 808 * * 5662 6597 * 2655 * 4799 * 4881 * * * * 18 0 * * * * * * 5164 0 0 V 19 * * * * * * * 2416 * 2187 3000 * * * * * * 1095 * * 19 11 7082 * 2322 322 * * 5205 1000 0 A 20 2833 6991 5009 4575 6778 5238 4996 6080 3525 5003 5741 5574 2648 3765 2894 4057 3476 5524 * * 20 0 * * * * * * 5205 0 0 M 21 3908 4138 * * * * * 2606 * 2824 6169 * * * * * * 844 * * 21 33 * 5474 * * * * 5205 0 0 H 22 5868 * 4136 3641 6283 7315 3990 4963 3984 * 5671 5809 * 4702 2108 3449 2278 4863 6540 5806 22 74 * 4313 * * 0 * 5194 0 1530 V 23 * * * * * * * 4604 5469 354 * * * * * * 6299 2824 * * 23 101 6549 4136 3459 138 0 * 5165 1000 2185 F 24 4644 * 5835 3052 2261 * 5097 5196 * 4166 5009 6020 * 7147 4718 3165 3985 6759 4754 2406 24 85 5853 4652 4243 78 666 1436 5173 1491 2272 R 25 4190 * * 4537 4813 5890 5279 6927 2614 3722 * 3682 * 4230 1775 3428 5390 4776 * * 25 62 6730 4944 3000 193 2444 293 5200 1000 2598 K 26 4255 * 6709 5033 * 6333 3486 3617 3315 1576 * 5733 5103 3829 3680 * 5305 4109 6806 * 26 187 4688 3595 1385 696 1575 590 5169 2321 2831 A 27 3143 * 3148 3474 5773 4286 6554 5458 4889 4196 * 3611 6622 3821 3770 2425 4087 6436 * * 27 112 5506 4238 2558 268 783 1256 5158 1390 3394 A 28 3359 * 5054 2657 * 2377 6609 5335 6767 5820 * 4266 2688 4437 * 4117 4072 3670 * 6563 28 118 5341 4222 712 1361 1042 959 5158 1806 3187 D 29 4292 * 1884 2860 6500 4295 5625 6569 5231 * * 2891 3478 6599 4769 3454 4345 6814 * * 29 109 5213 4453 2318 323 529 1704 5166 1567 3107 D 30 3744 * 3237 5699 * 1400 * * * * 5713 4176 4631 4030 * 2433 4058 * * * 30 133 5858 3822 1537 610 2399 303 5128 1534 3061 T 31 4387 * 4615 2818 * 2969 * 6897 4936 5605 5494 4426 6567 3245 3071 2588 3730 6311 * 5495 31 147 7038 3489 2322 322 1388 695 5049 1000 3578 W 32 4884 * * * 4816 4738 * * 5035 4921 * * 4129 4794 4276 3721 4318 * 1010 4001 32 30 5598 * 3027 189 303 2402 5066 1492 3748 E 33 5657 * * 2497 * 6446 5064 4123 3648 5324 6939 6928 4690 3199 2861 3684 2797 3714 * * 33 27 * 5742 * * 1595 580 5200 0 1864 P 34 3953 6532 5715 3040 4619 * 6859 4081 4893 1907 * 6511 3250 3393 5913 4947 4371 4715 5875 6433 34 12 6912 * 3700 115 410 2014 5188 1000 2137 F 35 * * * * 3652 * 6403 1586 6618 1704 * * * * * 4681 5026 2404 * * 35 0 * * * * * 0 5195 0 1000 A 36 1475 5780 5221 * 2925 3203 4722 * 4133 6389 * 4373 * 6884 4266 3499 5011 5648 * * 36 21 6121 * 3107 178 * 0 5195 1571 1000 S 37 4277 * 4635 2445 * 5467 4579 * 3573 7035 * 5201 * 4293 4012 2618 2188 4448 * * 37 11 * 7035 * * 0 * 5195 0 1000 G 38 2207 6368 * 5363 6477 1398 * * 5361 5724 * 5894 * 5674 6749 3345 3292 3903 * * 38 0 * * * * 0 * 5210 0 1000 K 39 3987 * * 3994 5735 * * 4177 2969 4318 5892 5772 * 4212 2446 6977 3142 2381 * 4779 39 0 * * * * * * 5205 0 0 T 40 5772 6037 * * * * * 5052 * 4864 5995 * * * * 6860 188 * * * 40 0 * * * * * * 5205 0 0 S 41 4486 6559 1283 5093 * 3699 6407 * * * * 1469 * 6591 * 6169 5040 * * * 41 0 * * * * * * 5205 0 0 E 42 1645 * 3596 3624 * 3550 6025 6630 4350 4596 * 4326 4540 4304 5555 3214 6099 5152 * * 42 0 * * * * * * 5205 0 0 S 43 * * 613 5903 5741 4991 * * * * 6379 2349 * * * 4424 5351 * * * 43 0 * * * * * * 5205 0 0 G 44 * * * * * 0 * * * * * * * * * * * * * * 44 0 * * * * * * 5205 0 0 E 45 * 5725 * 4131 6369 * 5200 * 6467 5783 * * * 5581 284 * 6247 * * * 45 33 5464 * 2500 281 * * 5205 1645 0 L 46 4744 2611 * * 6467 * * 1730 * 2738 * * * 7020 * 4134 4001 2328 * 6621 46 78 4247 * 510 1747 * * 5205 2357 0 H 47 3413 * 2914 5242 6491 4007 3334 * 2287 5415 5820 5223 3412 6961 3786 4098 3860 * * * 47 202 3412 4775 0 * * * 5205 2806 0 G 48 3833 6289 2738 3084 4301 3322 4000 * 6865 5715 * 3091 2838 3788 * 4657 5125 * 6574 * 48 66 5308 5682 1031 970 625 1508 5169 1609 2013 L 49 6713 * * * 2661 * * 5366 * 1143 7013 * 4867 * * 5733 5527 3643 2375 * 49 97 5963 4349 4060 89 1476 643 5159 1484 1937 T 50 4752 * 5717 4844 5686 4882 6309 3890 6388 1454 5656 4253 4678 * * 4154 3043 4239 5211 5060 50 104 4898 4788 2673 246 466 1856 5198 2056 2512 T 51 3156 * 4734 3378 6856 4299 5598 3903 5890 4193 * 5139 2232 5890 * 4114 2769 3775 * * 51 87 4560 5970 2535 273 1197 827 5194 2353 2363 E 52 3690 * 3006 2675 * 2645 * 6938 3971 * * * 2987 6755 3679 3714 4536 5190 6078 4851 52 76 4809 5973 2446 293 354 2199 5218 1992 2217 E 53 3464 * 3105 2541 5585 3925 6979 4573 3876 4676 * 3832 4708 3650 7122 3940 4084 4760 * 5570 53 94 4750 5259 293 2446 546 1665 5204 2058 1832 E 54 3194 * 2954 2568 * 4960 6384 6864 3091 * * 3588 4510 4019 5166 3129 3741 5861 * * 54 150 3799 5212 2676 245 931 1072 5211 3098 2034 F 55 3517 * 4271 * 1946 * * 5336 * 1589 5208 5972 4558 * * 5716 4560 4414 * 4307 55 32 5500 * 5343 36 964 1037 5181 1473 2252 V 56 3078 6076 5675 3129 6903 4481 6895 4012 4870 4381 6873 4324 3902 3332 4876 3463 3750 3274 * * 56 66 5252 5740 3965 95 * 0 5204 1693 1528 E 57 2609 * 4191 3877 * 5698 * 5618 4072 * * 4610 1990 4541 3188 4536 3651 4440 * * 57 96 4152 6889 1807 486 608 1540 5155 2868 2007 G 58 5004 6062 7244 * * 227 6599 * 6698 * * 6537 * 7131 * 4422 6873 * * * 58 48 4929 * 642 1476 0 * 5160 1894 1545 I 59 5463 * 4504 4145 6618 6867 6573 2599 6911 3697 5378 5179 5465 4938 2693 * 2498 2771 6383 * 59 11 7086 * 4524 64 * * 5207 1000 0 Y 60 * * * * 4786 * 5300 * * * * * * * * * * * 3522 232 60 0 * * * * * * 5207 0 0 K 61 7086 * * 2139 * * 7031 * 1681 5433 5400 * * 3593 2206 4936 4279 5994 * * 61 0 * * * * * * 5207 0 0 V 62 5852 * * * 5358 * * 2567 * 861 4463 * * * * * * 2455 6494 * 62 0 * * * * * * 5207 0 0 E 63 6187 * 7010 3095 6174 * 4378 6099 3789 4556 * 5356 * 4934 2352 4657 2517 2302 * * 63 0 * * * * * * 5207 0 0 I 64 6570 6095 * * 388 * * 4201 * 3838 5381 * * * * * * * * 4008 64 31 5546 * 0 * * * 5203 1332 0 D 65 3660 * 1577 2739 4260 4203 4090 6594 4075 4463 * 4113 * 4936 6291 * * 6278 * 4658 65 0 * * * * * * 5203 0 0 T 66 5520 5724 * * * * * 3125 * 4747 6154 * * * * 4740 1191 1654 * * 66 0 * * * * * * 5203 0 0 K 67 2805 * 2868 3061 * 1428 * * 3334 * * 5756 * 4955 5580 4343 6897 * * * 67 0 * * * * * * 5203 0 0 S 68 2141 * 2209 2733 * 4766 * 6976 4177 * * 4509 3550 6806 4016 3785 6055 * * 5725 68 35 5779 7484 2807 222 * * 5203 1000 0 Y 69 * * * * 3690 * 4597 * * * * * * * * * * * 3412 345 69 41 * 5150 * * * 0 5206 0 1000 W 70 * 6584 * * 765 * 6877 * * 3681 * * 7068 * * * * 6258 3506 2278 70 39 5226 * 3156 172 1764 503 5188 1867 1943 K 71 2852 * 3590 3224 * 4441 4418 * 2698 5188 * 4219 * 4831 2740 4340 3773 4792 * * 71 31 * 5571 * * * 0 5189 0 1661 A 72 1911 * 6941 3303 * 2974 * * 3269 * 6229 4625 5515 4288 3117 3380 4769 6728 * 6760 72 13 6823 * 3000 193 * 0 5147 1000 2105 L 73 3511 * 6508 4586 * 5751 5896 7167 3167 2824 4852 4800 6862 2181 2800 4884 4120 6464 * 5720 73 12 6928 * 2000 415 1097 909 5147 1000 2105 G 74 4203 * 5336 5828 6585 990 5674 * 2989 6551 * 2844 6871 5478 6891 4721 7065 6740 * * 74 104 5462 4420 1891 453 1028 973 5165 1431 1512 I 75 5545 6908 6699 5962 6505 3701 6973 2953 5243 3329 6329 5704 4815 3262 3901 5014 3383 2129 * * 75 187 3043 * 2000 415 466 1857 5131 2975 2802 S 76 3172 * 4853 2723 * 5585 * * 3671 5773 5745 6828 2562 4225 4384 3438 2944 3946 * * 76 95 3973 * 1461 651 0 * 5194 2543 1400 P 77 2937 3890 5202 6976 * 4414 * * * * 5779 5633 2323 7220 5741 2083 2377 5167 * * 77 139 3693 6095 1606 575 * * 5203 2937 0 F 78 5708 * * * 274 * * 4667 * 4171 5489 * * * 5748 * * * 5776 * 78 27 5734 * 1000 1000 * 0 5178 1000 1000 H 79 * * * * 2009 * 3600 4947 * 2247 5748 * * * * * * 5488 4714 1527 79 0 * * * * * 0 5178 0 1000 E 80 6526 * 3080 3399 * 6454 6563 * * 5776 * 6850 674 6420 4628 4950 5981 * * * 80 15 * 6611 * * 0 * 5178 0 1000 H 81 5421 6810 4876 1849 2807 * 5501 6116 4213 4154 6605 6190 * 5091 4199 5589 4401 3954 5002 3395 81 0 * * * * * 0 5205 0 1000 A 82 3128 * * * * * * 1826 * 4257 * * 6190 * * * * 895 * * 82 0 * * * * 0 * 5205 0 1000 E 83 3862 5911 3033 1756 * * * 4417 6925 7056 * 5902 2386 6917 * 4824 4600 2826 * * 83 0 * * * * * * 5204 0 0 V 84 * * * * 5179 * * 1380 * 3207 6305 * * * * * * 1156 * 5778 84 0 * * * * * * 5202 0 0 V 85 3579 7004 3753 5250 6018 * 4805 3784 4032 4812 * 6737 * 5196 2081 4099 4655 2207 * * 85 0 * * * * * * 5207 0 0 F 86 * * * * 109 * * 5984 * * * * * * * * * 4126 * * 86 30 * 5625 * * * * 5207 0 0 T 87 4359 * 3763 2872 7017 2598 6996 5832 4843 6351 5468 4655 * 4818 2615 * 2845 3388 * * 87 0 * * * * 0 * 5154 0 1000 A 88 4364 5580 * * * * * 1442 * 3528 3653 * * * * * * 1374 * 6607 88 127 6591 3758 0 * * * 5207 1000 0 N 89 3225 * 3110 3306 6093 * 4799 5281 3031 * * 4145 5104 4429 4194 2786 2778 * * * 89 239 4482 3211 1799 489 228 2772 5157 2254 3032 D 90 6813 * 834 3196 * 3852 * * 3844 * * 2897 5635 6674 * 5792 * * * * 90 174 * 3139 * * 583 1588 5094 0 3664 S 91 2046 * 3449 3375 * 4037 * * 4221 * * 6609 2080 4432 5184 3277 6689 5510 * * 91 380 6163 2201 2000 415 842 1178 5128 1000 3676 G 92 5038 * 3879 4227 * 2247 * 6268 5419 4296 * 3355 5324 3720 6140 2802 3388 3342 * * 92 283 6397 2588 0 * 499 1775 5033 1000 4341 P 93 2351 * 3062 5131 * 3105 4224 * 3367 4602 6312 3856 5168 4400 4988 5747 3721 5960 4352 * 93 366 6444 2233 0 * 420 1986 5172 1000 3709 R 94 3783 * * 1894 * 6399 * * 2739 * * 5248 6308 2090 2757 4269 5442 * * * 94 158 * 3268 * * 99 3917 5167 0 3859 R 95 * * 5529 * * * 292 * 5659 * * 4438 * * 3610 6176 * * * * 95 0 * * * * 0 * 5072 0 3532 Y 96 * 5462 * * 3998 * 4158 5981 * 3916 * * * * * * * 6353 6837 404 96 0 * * * * * * 5208 0 0 T 97 5570 * * * * 5884 184 * * * * * * 4721 * * 4512 * * * 97 0 * * * * * * 5208 0 0 I 98 * * * * 5550 * * 1651 * 2654 * * * * * 5793 * 1049 * * 98 0 * * * * * * 5155 0 0 A 99 3419 * * * * * * * 5618 * * * 174 * * * * * * * 99 0 * * * * * * 5155 0 0 A 100 4913 * * * 4810 * * 3342 * 632 4714 * * * * * * 2747 * * 100 0 * * * * * * 5155 0 0 L 101 5877 * * * 5706 * * 3739 4020 458 * * * 5095 * * 4229 5918 * * 101 0 * * * * * * 5155 0 0 L 102 4829 6105 * * 3270 * 6557 2821 * 929 5221 * * * * * 6457 2934 * * 102 0 * * * * * * 5155 0 0 S 103 4014 * 5550 * * 3606 * 5740 * * * 4033 * * * 640 3141 * * * 103 0 * * * * * * 5155 0 0 P 104 3511 * * 5550 * 6622 * * * * * 4568 360 5823 5577 6692 6457 * * * 104 27 5740 * 0 * * * 5155 1000 0 Y 105 * * * * 1656 6547 4502 * * * * 4310 * * * 6105 * * 2373 1435 105 0 * * * * * * 5155 0 0 S 106 3742 * * * 6153 1126 * * * 5740 * 4440 * * * 1365 * * * * 106 0 * * * * * * 5155 0 0 Y 107 * * * * 2612 * * * * * * * * * * * * 5647 * 293 107 0 * * * * * * 5141 0 0 S 108 5353 5684 * * * 4667 * * * * * * * * * 518 2197 * * * 108 0 * * * * * * 5132 0 0 T 109 * * * * * * * * * * * * * * * * 0 * * * 109 0 * * * * * * 4807 0 0 T 110 * * * * * 2066 * * * * * * * * * * 394 * * * 110 0 * * * * * * 1971 0 0 A 111 604 * * * * * * * * * * * * * * * 1548 * * * 111 0 * * * * * * 1615 0 0 V 112 * * * * * * * 1548 * * * * * * * * * 604 * * 112 0 * * * * * * 1615 0 0 V 113 * * * * * * * * * * * * * * * * * 0 * * 113 0 * * * * * * 1615 0 0 T 114 * * * * * 1548 * * * * * * * * * 1643 1566 * * * 114 0 * * * * * * 1615 0 0 N 115 * * 1548 * * * * * * * * 1566 * * * 1643 * * * * 115 0 * * 0 * * * 1615 0 0 //