HHsearch 1.5 NAME c9rkjA_ FAM FILE c9rkjA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9rkjA_.a3m DATE Sat Nov 15 10:05:26 2025 LENG 101 match states, 101 columns in multiple alignment FILT 101 out of 517 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.4 EVD 0.4500 0.7014 SEQ >ss_pred CEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEEECCEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCCCCCHHC C >ss_conf 9299998379829999927987489999999998579967837587877756666887809998754335740112320455552107567886732201 9 >Consensus mxifvxxxxxktxxxlevxxxxtVxxlKxxIxxxxgipxxxqxLxxxgkxLxDxxtLxxygixxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxpxxxxxx k >c9rkjA_ MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLAFRTFEALCIEPFSSPPELPDVM K >UniRef50_C1MWP1(1-101:199) Ubiquitin-like protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MWP1_9CHLO E=6e-05 s/c=0.48 id=23% cov=87% ------VKRGTKTFFILVHPSETIMELKQKIQSatEIDFPPtglhiERQRLTSGpnmARVLEDRYQLSQLKVDNDQVLALTIRADGEDESAYEDVVICEI GTP-------- >UniRef50_B9H346(77-165:369) Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H346_POPTR E=0.001 s/c=0.50 id=19% cov=89% --LLVVIPSRQKSVVVEARTYDTVQKIKAVILEKEQILPHQYNLVYAGEVLEDDRSLASLNL-------QSEPTLHL---IFNPKDLLSFSVITPAGETV K >UniRef50_Q4YYI6(6-96:1370) Ubiquitin-like protein, putative n=3 Tax=Plasmodium (Vinckeia) RepID=Q4YYI6_PLABE E=1e-09 s/c=0.71 id=21% cov=75% -----------------VKKNTTTEELKGMISEKKNVDINDIRLIYQGQCLSNTKTIAEYNI-------QNDHIIHLVIRKKENVNNSAYEKTNQFKNI- - >UniRef50_Q753F6(1-97:413) AFR358Wp n=2 Tax=Saccharomycetaceae RepID=Q753F6_ASHGO E=2e-05 s/c=0.52 id=20% cov=53% ---------KKERLPLQLSPSATIAEAKQMLARAKQCDESQLKMIFSGKVLQDGNTLEGCKL-------------------------------------- - >UniRef50_UPI00016E7540(1-103:376) UPI00016E7540 related cluster n=2 Tax=Takifugu rubripes RepID=UPI00016E7540 E=2e-09 s/c=0.61 id=22% cov=97% MLITLKTLQQQT-FKIEIDEEETVKTLKERIEAEKGkdnFPVSGLKLIYAGVILNDVKPLKEYNISDKNfvvVMATKPKTAPAATQPS-PAASGPCTAAP PAPGA-- >UniRef50_B3S5X7(87-143:384) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S5X7_TRIAD E=5e-05 s/c=0.86 id=21% cov=47% ---------------LNVELDQSICHVKELLHQQTNIPMEKQRLLLANKQLKDTETLRCYG--------------------------------------- - # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 2209 * 3072 589 * * * * * * * * * 1 0 * * * * * * 5844 0 0 D 2 * * 3101 2608 * 5162 * * 2915 5151 * * 4977 1672 3921 3659 4640 * * * 2 0 * * * * * * 6115 0 0 V 3 * * * * 5082 * * 1353 * 1646 3712 * * * * * * 2448 * * 3 0 * * * * * * 6372 0 0 F 4 5469 * * * 971 * 5412 4193 * 3810 * 4312 * 5264 5241 5347 3713 4934 * 3616 4 0 * * * * * * 6386 0 0 L 5 * * * * 2779 * * 1717 * 2974 * 5247 * * * * * 1334 * * 5 0 * * * * * * 6672 0 0 M 6 * * * 3257 * 5809 * 5520 2288 5571 4019 5527 * 5681 2170 4332 3435 2875 5235 * 6 36 * 5345 * * * * 6672 0 0 I 7 * * 5728 * 4912 * * 2062 * 4080 3529 * 5514 5373 5478 5299 1979 2217 * * 7 0 * * * * 0 * 6622 0 1000 R 8 4202 * 5350 * 6084 * * 4598 2573 2277 5581 4274 4042 3854 3046 3689 5564 3867 * * 8 27 5752 * 0 * * * 6673 1000 0 R 9 * * 4132 5264 * * 2949 * 4482 * * 3626 * 3795 2193 3314 2502 * 4793 4112 9 58 5539 5797 0 * * * 6716 1000 0 H 10 * * 4734 5174 * 1585 4876 * 4079 3416 * 2947 4650 3656 4520 3375 * * 5295 * 10 84 * 4143 * * * 0 6726 0 1000 K 11 4988 5847 * 4032 * 3318 3396 * 1458 * * 5135 * 4097 2298 * 4628 * * * 11 30 * 5626 * * 451 1897 6686 0 2211 T 12 * * 3259 3965 * 4676 4993 4530 3096 * * 3983 * 4786 5160 3934 1391 5227 * * 12 318 * 2339 * * 0 * 6725 0 1670 T 13 * 4632 5557 * * * 3588 4564 3188 * * 5440 4725 5392 3760 1948 2653 4161 * 3821 13 63 * 4558 * * 168 3189 6482 0 4259 I 14 * 5842 * * 2313 * 5667 1465 4849 3829 * * * * 5778 * 4691 3514 * 2739 14 0 * * * * 629 1502 6707 0 2099 F 15 4738 * 4072 3874 3336 5405 4121 4888 4560 4749 * 5878 3644 4887 * 3674 3105 3114 5823 3594 15 92 6086 4410 1000 1000 0 * 6754 1000 1000 T 16 6027 6109 6087 4998 5681 * * 2353 5548 1371 4355 * * * * * 4912 2356 * 5408 16 0 * * * * 0 * 6750 0 1906 D 17 * * 1834 1550 * * 4077 * 4139 5302 * 3801 * 4382 5054 3772 * 6205 * * 17 0 * * * * * * 6722 0 0 A 18 2441 4964 * * 6299 5647 * 2997 * 3358 4130 * 6003 * * * 5118 1228 * * 18 0 * * * * * * 6761 0 0 K 19 5461 * 2363 2796 * 5293 5277 * 3690 * 5383 4259 4450 3701 3310 2427 5351 * * * 19 17 6408 * 0 * * * 6761 1000 0 E 20 3863 * 4001 2239 5404 4656 * * 4742 3729 6502 * 2356 5134 4004 3424 3466 * * * 20 0 * * * * * * 6771 0 0 S 21 5635 * 4099 3598 5733 5261 * 6147 3773 5430 * 2272 * 5128 * 1638 3264 * * 5476 21 0 * * * * * * 6767 0 0 S 22 3486 * 1907 3146 * 4954 4916 4676 4845 5313 4723 4734 * 4013 6198 3840 2871 * 6763 * 22 0 * * * * * * 6761 0 0 T 23 * * 6260 4580 6019 6756 * * 4109 4432 * 5492 4452 * * 2417 862 6525 * * 23 0 * * * * * * 6801 0 0 V 24 * * * * * 5274 * 1834 * 3461 * * * * * * 6294 761 * * 24 0 * * * * * * 6801 0 0 F 25 2579 * 4840 2567 4895 3585 * 5259 4663 3096 4782 5335 * 4116 3656 3664 6392 5572 * 5669 25 0 * * * * * * 6801 0 0 E 26 4320 * 2324 2093 * 5617 4880 5563 4135 * 6428 5155 * 3393 5835 3294 3832 5067 6008 6224 26 0 * * * * * * 6801 0 0 L 27 5244 * * * 3151 * * 2771 * 1048 4785 * * * * * * 2472 6112 * 27 0 * * * * * * 6798 0 0 K 28 * * * * * * 6429 6265 277 4915 4588 * * 4757 4704 * * * * * 28 0 * * * * * * 6798 0 0 R 29 2718 * 5086 2577 6378 5622 * 4546 3026 4415 * 4505 * 2811 3420 4231 4540 6056 * 6065 29 0 * * * * * * 6798 0 0 I 30 5668 * * 3443 6757 * 6648 3912 2119 2771 3513 5890 * 3423 3518 4628 6669 4119 * 4910 30 0 * * * * * * 6798 0 0 V 31 6360 5375 * * 5430 * * 1087 * 2029 5877 * * * * * 6431 2349 * * 31 0 * * * * * * 6798 0 0 E 32 2759 5702 * 1954 4006 4744 4723 * 5479 4602 5343 5022 * 2828 5446 3438 * 6972 5784 4786 32 32 * 5525 * * * * 6798 0 0 G 33 2862 * 4318 2461 * 4641 * 6666 3591 4891 * 4551 4719 3765 3789 2661 4134 6373 6596 * 33 24 5903 * 601 1554 1443 661 6810 1697 1901 I 34 3633 * 5268 3130 6650 * 6657 4516 1849 2727 5937 5316 * 4302 4051 5834 5343 3999 * 5068 34 0 * * * * * 0 6812 0 1566 L 35 5336 6052 6223 2782 3803 6369 6799 4631 4543 4394 4761 4965 6883 4143 6545 4615 1647 4662 6657 5409 35 17 6438 * 0 * * 0 6812 1000 1566 K 36 5973 * 3660 3891 * 1063 4906 6528 3750 * * 3139 * 4969 5277 3852 * * * * 36 25 5838 * 1585 585 * 0 6812 1610 1566 R 37 5490 4805 6195 * 5857 * 6526 1331 6439 4044 5343 * * 5347 6935 5693 4763 1816 6335 5587 37 12 6864 * 1000 1000 * 0 6886 1000 1566 P 38 5106 * 3418 4268 5175 6276 5665 6362 4531 4007 * 4102 1003 5415 5754 4712 6585 * * * 38 0 * * * * * 0 6907 0 1566 P 39 2644 5662 4949 5651 6749 * * 2896 5463 5128 5575 * 1621 6397 5409 4763 6733 2783 * * 39 13 6853 * 2322 322 0 * 6907 1000 1566 D 40 3907 5425 3089 1895 * 4279 6494 * 4307 5033 * 2815 * 4541 5151 3012 5427 5672 * * 40 0 * * * * * * 6851 0 0 E 41 5389 6797 2975 3224 5457 5371 5313 * 3512 4198 5498 3924 * 2621 3268 3947 5096 4908 * 4760 41 0 * * * * * * 6851 0 0 Q 42 * 6572 * * 5525 * 6073 3116 * 3302 3675 * * 750 * 5457 5794 6458 * 6494 42 0 * * * * * * 6851 0 0 R 43 * 6458 7239 5342 * 6833 4187 5250 2301 4181 5948 5088 * 3959 1731 4295 4783 3466 6373 6883 43 20 6214 * 1585 585 * * 6851 1000 0 L 44 * * * * 4945 * * 2819 * 569 3665 * 6335 * * * * 4864 5243 * 44 0 * * * * * * 6851 0 0 Y 45 6289 5829 * * 3322 * * 1803 5501 2824 4618 6400 * 6168 6734 4611 4018 3093 5153 3380 45 35 5377 * 1938 436 * * 6851 1720 0 K 46 6142 5044 * * 1921 * 3533 5249 5015 3799 * 6227 * * * 4985 * 4945 4687 1475 46 10 * 7175 * * * * 6851 0 0 D 47 3039 5620 4637 4473 * 3147 5125 * 2457 4773 * 2622 * 3881 4216 3282 * * * 5287 47 13 6836 * 1585 585 0 * 6840 1000 1000 D 48 5830 * 3540 5235 * 651 * * * * 4807 3815 * 6332 4360 4646 5318 * * * 48 54 6026 5565 2000 415 * * 6850 1000 0 Q 49 6298 * 5441 4979 * * 5591 6360 1492 6420 5613 4563 * 2698 2518 3725 5243 5373 6068 * 49 12 6948 * 0 * 0 * 6845 1000 2033 L 50 5073 6320 * 2409 * * * 3148 5256 2428 * 5536 3344 3310 5774 * 5648 2429 * * 50 21 6081 * 2322 322 * * 6850 1000 0 L 51 6212 * * * * * * 4288 * 320 3070 * * * * 6026 * * * * 51 65 4513 * 397 2055 * * 6850 2554 0 D 52 5458 * 2762 2454 * 6294 4655 6853 2319 4475 6413 5705 5503 3166 5265 4160 3826 5382 * * 52 30 5598 * 0 * * * 6850 1814 0 D 53 6265 * 663 5854 * 6141 * * * 6555 6065 2483 4034 5770 6294 6285 * 6081 * * 53 44 5043 * 0 * * * 6850 2324 0 G 54 4549 6439 1918 3807 * 2995 4723 * 5450 6398 * 3550 4804 4464 5767 3202 3330 6904 * 6601 54 0 * * * * * * 6850 0 0 K 55 3567 6406 4027 6631 5423 * 4985 4762 2450 5830 5644 5586 * 4360 2324 3997 3260 6212 * 3830 55 13 6832 * 0 * * * 6850 1000 0 T 56 4891 4856 4985 7110 * * * 4370 4490 5079 * 5642 3751 5099 5089 3229 1036 5416 * * 56 19 6285 * 1000 1000 * * 6850 1000 0 L 57 * * * * 6525 * * 2984 * 474 4447 * * * * * * 3366 * * 57 0 * * * * * * 6850 0 0 G 58 3147 * 5711 2825 5609 2899 * 6311 2745 * * 5633 * 3856 4752 2179 4207 * * 6754 58 0 * * * * * * 6808 0 0 E 59 4723 6764 1672 2181 * 6417 * * 5349 * * 4857 * 3373 * 2597 5936 * 6498 4090 59 0 * * * * * * 6806 0 0 C 60 3745 2405 * 6077 5270 * 5714 6252 * 3130 * 5480 * * * 6421 * 5177 * 1036 60 0 * * * * * * 6690 0 0 G 61 * * 4112 5647 * 1021 6023 * 3326 * * 2302 5215 4633 * 4496 * * * * 61 16 6548 * 1000 1000 * * 6637 1000 0 F 62 5766 * * * 4322 * * 1334 * 1804 * 6084 * 5662 * * 6218 2316 * * 62 92 * 4011 * * * * 6463 0 0 T 63 4437 * 4520 3103 * 4708 5588 5382 2994 4670 * 4697 3826 4269 * 3362 2002 4714 * * 63 22 * 6057 * * * 0 6338 0 2570 S 64 3963 * 3652 2992 * 4881 5817 * 4737 5489 * 1672 4057 6087 6555 2649 4937 5159 * * 64 40 * 5210 * * * 0 6261 0 2787 Q 65 5212 * 2658 3302 5348 3738 4568 5262 3561 3967 * 2432 * 2865 * 5605 4221 * * * 65 154 5708 3608 1585 585 * 0 6251 1000 2906 T 66 4929 * 3121 * * 3091 * * * * * 2631 * 5431 * 1403 2758 5361 * * 66 211 3341 4745 2397 304 * 0 5955 2195 3839 A 67 2064 * * * * 4251 * * 4872 4847 * 4713 * 4892 4611 3084 2244 2339 * * 67 299 * 2418 * * 2643 252 5713 0 3966 R 68 * * * 3287 * * * 3348 1577 2025 4522 * * * 3538 * 4396 4592 * * 68 230 3283 4483 2169 363 * 0 5680 1769 4545 P 69 2003 * * 4214 * * 4852 2936 4187 4437 * * 2191 4205 4277 4167 * 4329 * * 69 0 * * * * 1800 489 5431 0 4628 Q 70 3526 * 4375 * * * * * 2937 2700 4176 * 4571 1970 4735 4229 3453 4450 * * 70 110 3762 * 903 1104 * 0 5683 1628 4111 A 71 2509 2680 * * * * 4503 * 2563 4176 * 4640 2800 * * 3479 3766 4243 * * 71 0 * * * * 3048 186 5683 0 4111 P 72 4464 4477 3040 3774 4604 * * 4802 * 4427 4221 * 1463 * 4287 4822 4428 * * 4562 72 0 * * * * 2076 391 5757 0 3946 A 73 1749 4546 4719 * 4824 * 3688 * 4707 3972 3835 * 4828 * 3180 3803 * 3064 * * 73 0 * * * * * 0 5857 0 3494 T 74 2573 * * * 4982 * 5158 3574 * 2699 4484 4671 4436 3330 * * 1714 * * * 74 0 * * * * 1466 648 5857 0 3494 V 75 3617 * 4851 * 4496 * * 3143 * 1383 4704 * 3845 * 3307 4637 * 3415 * * 75 0 * * * * 1383 698 6095 0 2933 G 76 4196 * 4115 * 5307 1291 4016 * 3670 * * 3252 4882 4611 * 4708 * 3926 * 5085 76 106 * 3820 * * 542 1675 6238 0 2263 L 77 2693 * 4412 3358 4465 4478 * * * 1281 4008 * * * * 3406 * 4548 * * 77 47 * 4957 * * * 0 6178 0 2082 A 78 2662 4150 4624 * 4512 * * 4691 5060 * 4370 4631 * 3015 3763 4555 3928 2069 * * 78 0 * * * * * 0 6129 0 2484 F 79 3148 * * 4624 4031 * * 3665 * 1678 3196 * 5041 * * 4495 3828 3687 * 4008 79 0 * * * * 1917 444 6129 0 2484 R 80 * * 4528 * 5005 2292 * * 3953 * * * 5009 4815 1272 3941 3643 5014 * * 80 0 * * * * 479 1824 6169 0 2112 T 81 3936 * 4177 * * 4502 * 4073 4981 3941 5702 2331 3461 4102 3751 3758 2971 4787 * * 81 62 * 4568 * * * 0 6301 0 1000 F 82 3199 * * 4397 2894 4192 4612 * 3983 5010 5104 4657 * * * 2046 * 3640 4220 3746 82 52 * 4813 * * 750 1303 6211 0 1521 E 83 4492 * 3722 1326 * 4636 * * 3987 3563 5358 3525 4843 3919 * 4523 4740 * * * 83 0 * * * * 0 * 6242 0 1479 A 84 3892 * 3782 2790 * 3932 4560 * 3830 * 4910 4892 2162 4135 3721 5232 3516 * * * 84 123 4715 4510 0 * * * 6336 1000 0 L 85 4823 * * * * 3753 * 3377 3775 1749 3812 * 4641 4592 * * 4603 2122 * * 85 0 * * * * * 0 6141 0 1000 C 86 3273 4941 4777 4723 * 5004 4483 * * 4931 4502 3169 4949 3200 3388 3417 3174 4631 * 4497 86 0 * * * * 0 * 6080 0 1000 I 87 3220 4803 * 4809 * 5121 * 1934 * 2528 3743 4756 * * 4490 4052 4580 5153 * 3816 87 0 * * * * * * 6201 0 0 E 88 3919 4491 5303 3356 * 3885 * * 3070 4756 5004 * 2972 * * 2394 2367 * * * 88 45 * 5011 * * * * 6090 0 0 P 89 4697 * 3419 3641 4357 * * * 4738 * * 5274 1090 * 4364 4731 3540 4883 * * 89 50 4886 * 2585 263 0 * 6054 1000 1000 F 90 3461 3692 5113 * 3239 * * 3629 3158 4193 * * * 3467 4410 3538 * 2834 * 3544 90 0 * * * * * * 6090 0 0 S 91 4063 * 2999 2796 * 3575 5086 * * * * 3671 4583 4295 * 2113 3091 4717 * * 91 0 * * * * * * 6037 0 0 S 92 3341 4295 4521 * * * * 4379 3678 3355 * 4652 4945 * * 2169 2316 3517 * * 92 0 * * * * * * 6037 0 0 P 93 3584 * 4743 * * 4780 * 4658 4498 * * * 1568 4447 * 2048 3466 4521 * * 93 56 4706 * 1000 1000 * * 6016 1000 0 P 94 4204 * * 4586 * * * * 4617 4797 * 3656 884 4644 4276 * 3703 4731 * * 94 0 * * * * * * 5917 0 0 E 95 * * 4239 2679 * 4371 * 4140 * 3645 * * 1082 4520 * 4309 4655 * * * 95 0 * * * * * * 5810 0 0 L 96 2272 * * * 4132 4360 * 2685 * 1992 * * * * * * 3894 2230 * * 96 0 * * * * * * 5477 0 0 P 97 * * 2890 * * 4010 * * 3894 * * * 845 3044 * 4108 * * * * 97 0 * * * * * * 5164 0 0 D 98 3799 * 1681 2114 * 2535 * * * * * 2835 * * * 3785 * * * * 98 0 * * * * * * 4863 0 0 V 99 2177 * * * 3488 * * 3631 * 2793 * * * * * 3462 2134 2775 * * 99 0 * * * * * * 4863 0 0 M 100 * * * * * * * 3665 * 3790 1072 3277 * * * 3515 3429 3480 * * 100 0 * * * * * * 4509 0 0 K 101 * * * * * * * * 615 * * * * * 1527 * * * * * 101 0 * * 0 * * * 4113 0 0 //