HHsearch 1.5 NAME c9q8iA_ FAM FILE c9q8iA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9q8iA_.a3m DATE Sat Nov 8 11:24:07 2025 LENG 106 match states, 106 columns in multiple alignment FILT 100 out of 258 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.9 EVD 0.4318 -1.1550 SEQ >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC CCCCCC >ss_conf 9678987899999999999999999999999526678888754148999999999999999999999999952138999999999999999999999845 416589 >Consensus xxxxxxxyxxixixxxxxxxixxxxlxxxxllxpxxxxarxxFsvxfyliAilFliFDvExvxLxPwaxxxxxxxxxxxxxxxxFlxiLxxGlvYewxkG aLxWxp >c9q8iA_ STEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIG ALDWTP >UniRef50_C7MTC7(20-138:139) NADH-quinone oxidoreductase subunit n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MTC7_SACVD E=2e-09 s/c=0.53 id=25% cov=92% --------LPLVLLFGLAVAFALFSVLLGPLFGPSRYnkakvsayecgiepspqplTGGGRMPIAYYVTAMLFILFDIEMVFLFPYAVSADLLGLWGVAA VSVFIATFFIADIYVWRRGGLDW-- >UniRef50_Q35100(1-117:118) NADH-ubiquinone oxidoreductase chain 3 n=44 Tax=Metazoa RepID=NU3M_METSE E=9e-15 s/c=0.69 id=26% cov=96% ---MYTEFYGILVLLIFSVVLSAIISGASYILGDKQPDREKvsayecgfdpfgtpgrPFSIRFFLIGILFLIFDLEISFLFPWCVVCNQVFPFGYWTMIV FLAVLTLGLVYEWLKGGLEW-- >UniRef50_Q648M7(2-130:132) NADH-ubiquinone oxidoreductase subunit A n=1 Tax=uncultured archaeon GZfos37B2 RepID=Q648M7_9ARCH E=1e-10 s/c=0.53 id=28% cov=98% -TDAILDYIPIVMMLILALIIPFVILFIVKQITPRNParfknttyeggkdpigEAQVRFNVSYYLLAIVFVLFDVEVLFLYPWAVCYKNWAILeaipgfq laAVGAMTIFLIIaLVVGDIYAWKKGAFTW-- >UniRef50_Q6VEH1(1-104:108) NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Siphonodentalium lobatum RepID=Q6VEH1_9MOLL E=4e-06 s/c=0.50 id=22% cov=84% -------------MFSIALIIPTIVMFLPFILAQSRTDTELYsafecgfdnlnhrefhSHPSFFYYQVIFLIFDMELVILIPLIWGSNTMSIITFSS--- FLLVVLLGWLYEWREGSLAW-- >UniRef50_D1ZZ50(3-112:206) NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Sordaria macrospora RepID=D1ZZ50_SORMA E=2e-09 s/c=0.57 id=22% cov=89% ---------SMTLFILFVSIIALLFLLINLVFAPHIPyqeknsefecgfhsfhQTRFPFDSPIAAQAICFVILDIELFTMYPYVGSLGINTLYSLVVILG FMFVISAGFVFELGKGAL---- >UniRef50_Q8M6U3(46-111:126) NADH-ubiquinone oxidoreductase chain 3 n=5 Tax=Tigriopus RepID=Q8M6U3_9MAXI E=0.0003 s/c=0.70 id=32% cov=57% ------------------------------------EGGRVSFSFHFFLVALIFIVFDVELLLLYPYIMLFKSGGGcltsevrFVCWVNCVFESSLFVGM VY----------- >UniRef50_B1W4W0(34-156:156) NADH-quinone oxidoreductase subunit n=5 Tax=Actinomycetales RepID=B1W4W0_STRGG E=5e-12 s/c=0.59 id=24% cov=100% ASEFFQSYSVIGLLALVGVLFVAVAFGAGRLLRPVVPTPeklltyecgvdpvgegWAHTQVRYYVYAFLYVIFAVDSIFLFPWATVFAAPGYgaTTLVEM FVFLGFLAVGLLYAWKKGVLAWA- >UniRef50_D2R4P5(2-196:225) NADH-ubiquinone/plastoquinone oxidoreductase chain 3 n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R4P5_9PLAN E=9e-07 s/c=0.28 id=30% cov=95% ----VATTLGIVAYLAVFAGVGVTFLFVNLLVGlfvrpsnphqekleiyecgePTIGSSFVQFDLRFYVVALLFIIFDVEVAFFFPWAAVFgktttlmkd dvqvvqvaengeleltpaaagiykelgvrnptvptttppalasavpttgdeaaiasarihagaRTLAWLTIIDIGAFFAVLLIGFAYVWKRGDLDW-- >UniRef50_P48909(2-110:131) NADH-ubiquinone oxidoreductase chain 3 n=13 Tax=Saccharomycetales RepID=NU3M_CANPA E=0.0001 s/c=0.44 id=27% cov=88% ----------FTAYLILCPIIAVVLVGLNWLLATSNSyiekdgpfecgftsfqQSRSAFSVAFILVAILFLPFDLEISSILPFVISPYSNGLYGLVILVI FLILLIVAFVVEIQLKAL---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 1928 * * * * * * * * * * * * * * 440 * * * * 1 0 * * * * * * 2392 0 0 T 2 * * 2649 * * * * * * * * * * * * 1546 1006 * * * 2 0 * * * * * * 2782 0 0 E 3 2862 * 2796 766 * * * * * * * * * * * 2939 * * * * 3 0 * * * * * * 2960 0 0 V 4 3788 * * * 3608 * * 3740 * 2349 1387 * * * * * * 2380 * * 4 0 * * * * * * 3536 0 0 I 5 * * * * 2855 * * 2317 * 1872 2723 * * * * * * 3063 * 3097 5 0 * * * * * * 3979 0 0 A 6 1640 * 4554 3367 * * 4787 * * 4628 * 4654 * 2619 * 3139 3212 4676 * * 6 0 * * * * * * 3979 0 0 H 7 4664 * 3911 1953 * * 3877 * * * * 4347 4534 2559 3781 4175 2836 * * 4735 7 0 * * * * * * 4022 0 0 H 8 * * * * 3669 4917 4073 * * * * 5004 * * * * 4040 * * 440 8 0 * * * * * * 4165 0 0 W 9 3391 * * * 2937 4174 * 2970 * 1649 * * * * * 4218 * 3203 4647 3837 9 0 * * * * * * 4306 0 0 A 10 2358 * * * * 3135 * 4231 * 5350 * * 1134 * * 2905 * 5359 * * 10 0 * * * * * * 4577 0 0 F 11 3816 * * * 2863 * * 1564 * 2150 3920 * * * * * 5842 3003 * 5647 11 0 * * * * * * 4767 0 0 A 12 3019 * * * 4052 3061 * 3457 * 1641 * * * * * 5730 3288 2774 * 5828 12 0 * * * * * * 4848 0 0 I 13 3366 * * * 4411 5299 * 1423 * 1991 6093 * * * * 4901 6094 2960 6089 * 13 0 * * * * * * 4848 0 0 F 14 4305 * * * 1800 * 4425 * * 2408 3463 5639 * 4005 * * * 4331 * 2289 14 0 * * * * * * 4933 0 0 L 15 3352 5531 * * 2512 * * 2967 * 1524 6151 * * * * 4922 5049 2715 * * 15 0 * * * * * * 4933 0 0 I 16 2666 * * * 4359 2836 * 2197 * 2491 5000 * * * * 4754 4935 2675 * * 16 0 * * * * * * 4933 0 0 V 17 2622 * * * 2909 3850 * 2293 * 2772 5135 * * * * * 5270 2118 * * 17 0 * * * * * * 4943 0 0 A 18 1262 5004 * * 6254 2826 * 4317 * 6379 6088 * * * * 3404 3884 2656 * * 18 0 * * * * * * 4943 0 0 I 19 2932 6147 * * 4736 * * 2774 * 1754 6279 * 4388 * * 4369 3822 2358 * * 19 0 * * * * * * 4943 0 0 G 20 2637 6004 * * 4840 2341 * 2302 * 2762 * * * * * 5814 4897 2397 * * 20 0 * * * * * * 4943 0 0 L 21 * * * * 1979 * * 1587 * 1883 * * * * * * 5162 3126 * * 21 0 * * * * * * 4943 0 0 C 22 1812 5051 * * * 2995 * 4787 * 5837 6147 * 2986 * * 3284 3478 2530 * * 22 0 * * * * * * 4943 0 0 C 23 2095 5301 * * 3904 3178 * 3498 * 2263 * * * * * 4543 3645 2799 * * 23 0 * * * * * * 4943 0 0 L 24 2207 * * * 5910 2423 * 2425 * 3105 6346 * * * * 5430 3900 2510 * * 24 0 * * * * * * 4943 0 0 M 25 3044 * * * 3072 4493 * 2562 * 2624 2764 6379 3879 * * 4681 5268 3447 * * 25 0 * * * * * * 4943 0 0 L 26 6515 * * * 3741 * * 3047 * 1041 3320 * * * * 6386 5785 2616 * 6151 26 0 * * * * * * 4943 0 0 V 27 4452 * * * 2572 2514 * 3420 * 2204 5974 * * * * 4096 4524 2451 * * 27 0 * * * * * * 4943 0 0 G 28 2290 * * * * 5400 * 3227 * 1370 4989 * * * * 5339 5061 2380 * * 28 0 * * * * * * 4943 0 0 G 29 2647 * * * * 2792 * * * * * 2483 3640 * 5447 1591 4413 4835 * * 29 0 * * * * * * 4943 0 0 W 30 3458 * * * 3850 3823 3878 4587 3963 3182 5935 5475 5910 * 3656 4870 4411 5159 2821 3327 30 0 * * * * * * 4943 0 0 F 31 5118 * * * 2917 * * 2591 * 977 * * * 6173 * * 5823 3061 6228 * 31 18 6306 * 2000 415 * * 4943 1000 0 L 32 * * * * 2472 * * 3567 * 628 6346 * * * * 5837 * 4090 * * 32 0 * * * * * * 4943 0 0 G 33 1947 * * * * 1320 6024 5983 * * * 5701 5189 5985 2999 3417 5178 * * * 33 134 3498 * 3765 110 * * 4874 2865 0 G 34 * * 4546 6134 * 5363 * * 4573 * * * 695 2869 6176 5028 4453 6159 * 5817 34 0 * * * * * * 4882 0 0 R 35 6377 * * * * 6030 3768 * 2056 6451 6426 5286 5806 4235 1727 2715 4710 4424 * * 35 177 3230 6791 3947 97 * * 4882 3120 0 A 36 4090 * * * 5186 3605 * 4172 1953 * * 3866 * 4482 2035 3734 5987 4227 * 5945 36 116 3692 * 4116 86 0 * 4930 2753 1000 R 37 4392 * 5455 3635 * 3456 * * 3111 6025 * 4686 1682 5178 3956 3302 4151 6253 * 6212 37 539 1681 * 4038 91 * * 4873 4230 0 A 38 5063 * 2080 5917 * 4125 6588 * 5072 * * 3331 4399 3842 5181 1911 3190 * * * 38 122 3620 * 4023 92 * * 4975 3112 0 A 39 1435 * 6469 * * 4855 * * * * 6095 6002 3473 5394 5573 2501 2044 * * * 39 134 3492 * 4044 90 * * 4993 3032 0 R 40 5536 * 7260 4082 6993 5099 4172 * 4545 * * 4815 5290 4654 862 6161 * * 3151 * 40 38 5251 * 3993 94 * * 5083 1919 0 L 41 4157 * * 4437 4059 4040 4909 2965 4265 3169 4378 5333 5094 4005 6662 4538 3040 3141 * * 41 51 4846 * 4058 89 * * 5101 2311 0 R 42 4776 * * * * 4846 6185 * 3545 * * 5478 1708 2996 1954 4258 5682 5327 * 5592 42 40 5209 * 3943 97 * * 5140 1693 0 L 43 * * * * 474 * * 5761 * 4218 4530 * 7197 6686 * 4789 5642 5242 6398 4221 43 0 * * * * * * 5143 0 0 S 44 6308 * 3074 6924 * 5047 4248 * 5573 * * 3458 3214 3913 6940 1071 * * * 7093 44 0 * * * * * * 5143 0 0 A 45 4653 * * * 4262 * * 2112 * 2890 5696 6332 4987 6597 * 4249 5269 1359 * * 45 9 7318 * 4087 87 * * 5143 1000 0 K 46 4594 * * 7281 * 4952 3623 6631 2500 * * 4744 4131 3231 1464 3747 * 6159 * * 46 0 * * * * * * 5160 0 0 F 47 * * * * 640 * 6561 5404 * 6290 * * * * * * * * * 1684 47 0 * * * * * * 5160 0 0 Y 48 5404 * * * 1393 * 6679 5202 * 5992 * * * * * 6183 * * * 918 48 0 * * * * * * 5160 0 0 L 49 5404 * * * 6464 6332 5694 3519 * 841 3605 * 6699 6642 6631 5992 5158 3758 * 4103 49 0 * * * * * * 5160 0 0 V 50 * * * * 4043 * * 1732 * 3405 5149 * * 5404 * * 4514 1582 * 3129 50 0 * * * * * * 5160 0 0 A 51 418 * * * * 4066 * * * 6293 6332 * * 5626 * 3165 6011 5694 * * 51 0 * * * * * * 5160 0 0 M 52 6718 6031 * * 5089 * * 1249 * 2060 3009 * * * * 5273 7056 3139 * 6134 52 0 * * * * * * 5160 0 0 F 53 4983 5404 * * 4706 * * 2909 * 861 4693 * * * * 5486 4912 2958 * * 53 0 * * * * * * 5160 0 0 F 54 * * * * 162 * * * * 5043 * * 5273 * * * * * * 4330 54 0 * * * * * * 5160 0 0 V 55 * * * * * * 6134 2143 * 1162 5081 * * * * * * 1822 * * 55 0 * * * * * * 5160 0 0 I 56 3424 * * * * * * 1396 * 2173 4116 * 6214 * * * * 2096 * * 56 0 * * * * * * 5160 0 0 F 57 * * * * 134 * * * * 4521 * * 5273 * * * * * 5694 * 57 0 * * * * * * 5160 0 0 D 58 4527 * 181 3749 * * * * * * * * * * * * * * * * 58 0 * * * * * * 5160 0 0 V 59 5273 * * * 5312 * * 1915 * 2183 4080 * * * * 6031 * 1362 * * 59 0 * * * * * * 5160 0 0 E 60 * * 3919 117 * * * * * 6372 * * * * * * * * * * 60 0 * * * * * * 5160 0 0 A 61 2730 * * * * 6571 * 1976 * 2610 4460 * * * * 4270 2958 2361 * * 61 0 * * * * * * 5160 0 0 L 62 2405 * * * 5404 * * 2672 * 2878 4840 * * * * 5073 3854 1471 * * 62 0 * * * * * * 5160 0 0 Y 63 * * * * 1471 * * 3176 * 1608 6133 * * * * 4668 5404 6315 * 3173 63 0 * * * * * * 5160 0 0 L 64 * * * * 3860 * * 2677 * 685 3569 * * * * * 4863 4867 * * 64 0 * * * * * * 5160 0 0 F 65 * * * * 1417 * 5273 3109 * 2841 4999 * * * * * 5234 5542 6731 1969 65 0 * * * * * * 5160 0 0 A 66 3982 * * * 6171 * * 6699 * 6405 * * 236 * * 4783 6784 7144 * * 66 17 6403 * 0 * * * 5160 1000 0 W 67 5190 4853 * * 3509 * * 3663 * 3422 6188 * * * * 6293 * 4384 1051 3048 67 15 * 6627 * * * * 5160 0 0 S 68 916 5595 * * 4960 5287 * 3455 * 6132 5436 * 3136 * * 4649 5974 3421 * * 68 21 6125 * 0 * * 0 5148 1000 1000 T 69 3793 * * * 4456 5402 * 3332 * 3057 4168 * 6684 4894 * 5193 3424 1491 4772 5192 69 11 6979 * 0 * * 0 5148 1000 1000 S 70 2958 5007 5044 * * 5210 6399 3870 6979 5727 4343 4869 * 4876 7204 2179 3458 2223 5297 * 70 14 6716 * 2000 415 0 * 5148 1000 1000 I 71 3527 7147 * 6471 2018 6561 6783 3497 5289 2366 4607 6280 6214 * * 4145 * 5803 4628 2859 71 61 4596 * 4397 70 * * 5160 2290 0 R 72 5458 6207 5044 5525 5340 3081 4488 * 2593 3922 * 3056 5719 5945 2619 3983 5160 5311 5604 4745 72 45 5850 6190 2000 415 * * 5160 1611 0 E 73 3536 * 3195 2577 * 4125 * 4343 4577 4514 5298 3923 6873 4272 5239 2857 4001 5018 * 4822 73 128 3554 * 2848 216 0 * 5139 3070 1000 S 74 5175 * * 6011 4112 3862 * 3514 * 1823 3461 3406 6193 * * 3243 5353 3767 4502 6207 74 98 3925 * 1740 513 * * 5160 2741 0 G 75 3499 * 5608 6183 5783 1369 * 6876 4853 6055 5854 3743 4257 * 6679 2366 4242 6280 * * 75 24 5941 * 2759 231 * * 5160 1584 0 W 76 5037 * * * 4406 4678 * 3292 5679 2169 4957 4895 4243 7151 6315 3680 4018 3940 2553 5272 76 70 4710 6783 1595 580 * * 5160 2098 0 V 77 4935 * * 4154 2639 5554 * 3731 6006 3205 4684 * 4445 6164 4860 3116 3722 4487 5532 2842 77 26 5787 * 2637 253 * 0 5158 1907 1000 G 78 2363 * 6157 6454 6127 1521 * 5185 6866 5429 5625 6181 6415 6295 * 2968 4045 3779 5282 6293 78 41 6871 5692 2585 263 0 * 5158 1000 1000 F 79 6270 5584 * * 1846 5474 * 4157 6711 1740 5564 * * * * 5585 6350 3239 5400 3098 79 35 5400 * 0 * 0 * 5132 1481 1000 V 80 4361 6723 * * 3663 3723 * 2168 * 3977 4609 6171 * * * 4960 3797 2252 3037 6561 80 0 * * * * * * 5160 0 0 E 81 2905 6293 5958 1861 6356 4871 6784 3223 5547 6290 4761 6939 5918 * 7204 3144 3742 3599 6302 6133 81 15 * 6624 * * * * 5160 0 0 A 82 3245 5362 * * 3633 4528 * 3395 * 2742 1966 6414 * * * 3815 5488 2830 * * 82 0 * * * * * 0 5150 0 1000 A 83 3712 4533 * * 3399 3984 * 3067 * 2049 4263 6778 * 6640 * 4038 3326 3774 5479 4868 83 0 * * * * * 0 5150 0 1000 I 84 4513 6628 6205 6492 3113 3477 * 2489 * 2391 3849 * * * * 4597 3513 2746 * * 84 0 * * * * 0 * 5150 0 1000 F 85 * * * * 213 * * 4887 * 6055 6190 * * * * 4749 5107 * * 6918 85 0 * * * * * * 5160 0 0 I 86 7060 * * 6422 4295 * * 2037 * 1306 4093 * * * * 4836 4447 2812 * * 86 0 * * * * * * 5160 0 0 F 87 2816 * * * 3614 3099 * 2844 * 1808 4325 * 6055 * * 5349 4743 3211 * * 87 30 5586 * 0 * * * 5160 1450 0 V 88 5416 * * 5343 4262 * * 1358 * 2806 5371 * * * * 5115 4036 1985 * * 88 25 5837 * 0 * * * 5160 1685 0 L 89 * * * * 5526 * * 3569 * 316 * * 5273 * * * * 3942 * * 89 0 * * * * * * 5160 0 0 L 90 3974 6849 * 7001 2618 4923 * 3306 * 2233 7172 * * * * 3281 2936 2807 6302 6134 90 0 * * * * * * 5160 0 0 A 91 3482 * * 6853 5019 6302 * 2521 * 1816 4186 * * * * 6834 5468 1996 5008 4966 91 18 * 6356 * * * * 5160 0 0 G 92 2498 * * * * 450 * 6178 * * * * 6841 * * 4634 6168 6152 * * 92 0 * * * * * 0 5150 0 1000 L 93 * * 6088 * 2077 6178 * 4512 * 1151 6396 * * * * 5269 6272 3924 4474 3670 93 0 * * * * * 0 5150 0 1000 V 94 2707 * * * 3807 * * 2127 * 2639 7117 * * * * * * 1795 5593 3837 94 0 * * * * * 0 5150 0 1000 Y 95 * * * * 4476 * 3887 6382 * 6395 6396 * * * * * * 4754 4303 388 95 20 6161 * 0 * 0 * 5150 1000 1000 L 96 2069 * * 946 6384 6004 * 5794 * 3881 6574 * * * * * * 3074 * * 96 0 * * * * * * 5149 0 0 V 97 5082 * * * 6018 * * 3052 6048 3500 6308 * * * 4717 * * 4461 692 5978 97 0 * * * * * * 5149 0 0 R 98 4377 6486 * 6635 5229 3848 * 5581 1776 4398 6311 3619 * 5456 2244 4128 6714 5067 5577 5119 98 0 * * * * * * 5149 0 0 I 99 6782 * 5540 2348 6339 * 6510 7136 1286 6210 4566 4215 * 4821 3578 4308 5078 * 6643 6192 99 0 * * * * * * 5149 0 0 G 100 * * 6486 6613 * 294 * * 3689 * * 5951 * 6180 5944 5279 * * * 6192 100 0 * * * * * * 5149 0 0 A 101 1099 * 5765 * * 3667 7306 3920 * 3856 6866 6180 * * 6284 3469 6755 2792 * 6005 101 0 * * * * * * 5149 0 0 L 102 * * * * 2838 * * 4412 * 373 5543 * * * * * * 5691 * * 102 0 * * * * * * 5149 0 0 D 103 3981 * 2043 1733 6257 6568 * * 4048 * * 3190 * 4637 4147 4659 3979 * * * 103 0 * * * * * * 4908 0 0 W 104 * * * * * * * * * * * * * * * * 5630 * 65 5398 104 0 * * * * * * 4842 0 0 T 105 1215 * * * * 3027 * * * * * * * * * 2588 2046 4718 * * 105 0 * * * * * * 4357 0 0 P 106 * * * * * * * * * * * * 0 * * * * * * * 106 0 * * 0 * * * 2521 0 0 //