HHsearch 1.5 NAME c9ogyR_ FAM FILE c9ogyR_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9ogyR_.a3m DATE Sat Jan 17 10:43:45 2026 LENG 120 match states, 120 columns in multiple alignment FILT 86 out of 88 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.7 EVD 0.4016 -0.4149 SEQ >ss_pred CCEEEEECCCHHHHHCCCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECHHHCCCEEEEEECCEEEEEEEEHHH CCCHHCCCCCCCCCCCCCCC >ss_conf 9537970558899732898999984254232013228982257899999999863105689860688720418603346989999718805899970514 00010241133134468898 >Consensus fkxftyRGxxlxeLxxmxxxexxxlxxarxRRxlxRGlxxxxxxLlxkixkxkxxxxxxxkxxxikTxxRxxxIlPxxvgxxixVyNGkxfxxvxIxxxM iGhklGEFaxTrkxxxhgxP >c9ogyR_ FRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLSRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEM IGHYLGEFSITYKPVKHGRP >UniRef50_Q3LWF2(17-137:151) Ribosomal protein L15 n=1 Tax=Bigelowiella natans RepID=Q3LWF2_BIGNA E=1e-23 s/c=0.92 id=38% cov=96% -KTKYYKGINVKK-YDLSDEKFIlSTMNNRSKRKLYRymktkkNLKSNQHLLLNFFDKLFNR----KTNDKLKTHVRNCIITPSMINKKIYVYNGNSYSY IELQTLMLGKFLGEFSLTYKPVKHGNP >UniRef50_P56808(1-85:92) 30S ribosomal protein S19, chloroplastic n=853 Tax=cellular organisms RepID=RR19_ARATH E=5e-09 s/c=0.73 id=34% cov=62% ------------------------------------------KHLLRKIEKLNTKAEK----EIIITWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLM VGHKLGEFSPTINFRGHAK- >UniRef50_Q2GUS0(33-123:152) Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2GUS0_CHAGB E=4e-22 s/c=1.15 id=39% cov=77% -----------------PTTSCSQYFSAPHRRPATRLPRRSNHLPLPRLPIVRPE--PGKRVAPIRTQARSATILPNFVGLKFQVHNGKVYHDVTITEEM VGHKLGEFSP---------- >UniRef50_B7XR79(47-167:181) SSU ribosomal protein S19P n=2 Tax=Enterocytozoon bieneusi H348 RepID=B7XR79_ENTBH E=8e-33 s/c=1.17 id=39% cov=101% FKTFTYKGKDLETLMNMKLSEFAQLIPSKNRRHLLRGINKYELSLLEEVDKWQATAQEtGKKPGPIKTHERTMVIVPSMIGCSIAVHCGNGFFPLDIKAE MIGKKLKDYVPTKVHPSHGRP >UniRef50_Q25808(13-78:90) Rps19 protein n=1 Tax=Plasmodium falciparum 3D7 RepID=Q25808_PLAF7 E=3e-06 s/c=0.80 id=25% cov=37% ---------------------------------------------------------------------KNLYIYKKLLNLYIKVYNGYKFIPIYINKTK LFNKLGNFIYTK-------- >UniRef50_Q9TAJ3(3-83:84) Ribosomal protein S19 n=1 Tax=Cafeteria roenbergensis RepID=Q9TAJ3_CAFRO E=1e-11 s/c=0.87 id=34% cov=52% ----------------------------------------------------------NDKNVIYKTQARGSTILPLIMNINVGVHDGYTFFKLTPNASM VGYKLGEFVRTRQAFRYGK- >UniRef50_P39697(113-210:212) 40S ribosomal protein S19, mitochondrial n=120 Tax=cellular organisms RepID=RT19_ARATH E=4e-22 s/c=1.07 id=31% cov=82% --------------LPLSLDESIEEAEKKENKMMSRSVWKDP--FVDAFLMKKKNAALNRK-----IWSRRSTILPEYVDSAVRIYNGKTHVRCKITEGK VGHKFGEFAFTRKVKKHAK- >UniRef50_C7DIC4(4-116:130) Ribosomal protein S19/S15 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIC4_9EURY E=4e-22 s/c=0.93 id=32% cov=95% --KVAFRGKVPSELEKLTNEEYAKLIKSRQRRWLKRN-SIQLRQLSEKISRYKQKGI----NKSIKVKSRSALIMPSWIGMQFEVYNGKEYQKLEITAAM LGHRLGEFVYSTKRVMHSAP >UniRef50_Q9G8Q5(19-70:88) Ribosomal protein S19 n=1 Tax=Naegleria gruberi RepID=Q9G8Q5_NAEGR E=2e-05 s/c=0.97 id=33% cov=36% ---------------------------------------------------------------------RSNLVLPIHFNKLFNIYNGKQFIPIRFnKEG VINHKVGEFAFS--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * F 1 * * * * 417 * * * * * * * * * * * * * 1994 * 1 0 * * * * * * 2959 0 0 R 2 * * * * * * 3589 * 754 * * * * * 1787 4879 * * * * 2 0 * * * * * * 3210 0 0 K 3 * * * 1871 * * 5449 * 1369 * * 3773 * * 4342 * 2365 * * * 3 0 * * * * * * 3502 0 0 F 4 * * * * 639 * 5159 * 4018 * * * * * * * * 4035 * 2271 4 0 * * * * * * 3502 0 0 T 5 3164 * * * * * * * 3113 * 5050 * * 4990 3282 3676 1094 * * 4018 5 0 * * * * * * 3502 0 0 Y 6 * * * * 1999 * * * * * * * * * * * * * * 415 6 0 * * * * * * 3539 0 0 R 7 * 3847 * * * * * * 2480 * * * * * 413 * * * * * 7 0 * * * * * * 3539 0 0 G 8 * * * * * 0 * * * * * * * * * * * * * * 8 0 * * * * * * 3539 0 0 V 9 * * * * 3917 * 3591 3547 1553 3657 3847 * * * * * * 1976 * 5550 9 0 * * * * * * 3539 0 0 D 10 * * 1685 4683 * 4890 * * * * * 4068 4438 4758 * 2768 1912 4036 * * 10 0 * * * * * * 3539 0 0 L 11 * * * * 4294 * * 4521 * 687 * * 4036 * * * * 2161 * * 11 0 * * * * * * 3539 0 0 D 12 4775 * 1557 1333 * 3237 * * 4068 * * * * * * 4036 * * * * 12 0 * * * * * * 3539 0 0 Q 13 4517 * 3222 1095 * * * * 2683 * * * * 2484 * * 4427 * * * 13 89 * 4068 * * * * 3539 0 0 L 14 * * * * * * * 5413 * 34 * * * * * * * * * * 14 0 * * * * 0 * 3402 0 1000 L 15 4764 * * 3337 * * * * 3628 1304 3801 * * 2778 4734 * 4972 4842 * 4143 15 0 * * * * * * 3687 0 0 D 16 3193 * 1705 2571 * * * * 2303 * * 3135 4006 * * * 4764 * * * 16 0 * * * * * * 3687 0 0 M 17 * * * * * * * 3928 * 1588 785 * * * * * * * * 5563 17 0 * * * * * * 3687 0 0 S 18 4995 * 5140 4114 3937 * * * 3680 * * * 1734 * * 1367 4295 * * * 18 46 4995 * 3170 170 * * 3767 1000 0 Y 19 * * 4204 * 3750 * * 3209 * 2335 2795 4295 3937 5213 5241 4183 2967 4248 * 5981 19 51 4837 * 3170 170 * * 3767 1000 0 E 20 * * 1688 1487 * * * * 3881 4837 * 5217 * 4648 * 3551 3681 * * * 20 0 * * * * * * 3767 0 0 Q 21 * * 2093 1270 * * * * 3046 * * * * 2715 * 3686 * * * * 21 0 * * * * * * 3767 0 0 L 22 * 4550 * * 1463 * * 4826 * 1747 * * * * * 4118 * 2709 * 4295 22 0 * * * * * * 3767 0 0 M 23 1767 * * 4837 * * * 1735 * 4826 3188 * * * 5400 4550 5241 2911 * * 23 80 4204 * 0 * * * 3767 1000 0 Q 24 3914 * 5400 1713 * * * * 1830 * * * 4150 2530 * 4204 * 4648 * * 24 0 * * * * * * 3767 0 0 L 25 * * * 4118 * * * 3213 4826 633 * * * 4882 * * 4204 5400 * 4550 25 0 * * * * * * 3767 0 0 Y 26 3038 * * * 2068 * * 3416 * 1648 3486 * * * * * * 4142 * 3624 26 0 * * * * * * 3767 0 0 S 27 * * 4995 4118 * * 5400 * 3337 * * 2950 1043 * 4882 2838 * * * * 27 0 * * * * * * 3767 0 0 A 28 606 5241 * * * * * * 4118 * * 4204 * * * 2560 4840 * * * 28 0 * * * * * * 3767 0 0 R 29 * * 4648 * * * * * 2333 * * * 4550 3937 613 * * * * * 29 0 * * * * * * 3767 0 0 Q 30 3937 4826 * 3484 4648 * 4550 4908 * 4556 4302 4547 * 1274 4840 4204 4995 5367 * * 30 0 * * * * * * 3767 0 0 R 31 * * * * * * * * 4204 * * 4118 * * 281 * * * 3937 * 31 0 * * * * * * 3767 0 0 R 32 * * * * * * * * 4180 * * * * * 182 * * * 3976 * 32 0 * * * * * * 3959 0 0 R 33 4770 * * * 4913 * 4612 3976 3591 * 4180 * 4444 * 1996 1731 4483 * 4478 * 33 0 * * * * * * 3959 0 0 L 34 4444 * * * 2887 * * 2340 * 1252 2918 * * * * * * 3850 * * 34 0 * * * * * * 3959 0 0 S 35 5536 * 5323 * * 4953 * * 1556 4612 * 3528 * 5150 3357 2270 4444 5204 * 4399 35 0 * * * * * * 3959 0 0 R 36 * * * * * * * * 2567 * * 4997 * * 441 * * * 3976 * 36 120 3650 * 2002 414 * * 3959 1566 0 G 37 * * * * * 430 * * * 4444 * 3438 * 4997 * 3500 * * * * 37 191 * 3013 * * * * 3959 0 0 L 38 * * * * 3024 4829 * 2600 * 977 5284 * 4474 * * * * 4019 * 4773 38 0 * * * * 0 * 3668 0 1872 R 39 * * 4913 4997 * 5204 * * 2943 * * 4042 3662 3976 3569 1609 3214 * 4180 * 39 47 4961 * 3170 170 * * 3959 1000 0 R 40 * * 4330 5103 5372 * * 3699 2727 4913 4953 * 2728 * 2281 3045 5204 5559 * 3692 40 0 * * * * * * 3959 0 0 K 41 5658 5410 4180 2531 * * * * 1601 * * 4075 * 4478 4635 3275 * 3180 * 4612 41 0 * * * * * * 3959 0 0 Q 42 4207 * 5372 2495 * * 2412 * 5476 4478 * 4444 2786 1894 * * * * * 5103 42 130 4997 4180 1000 1000 * * 3959 1000 0 H 43 4320 * * 4226 * * 3350 6561 2613 3431 4315 * 3169 4059 2319 4995 * 3671 * * 43 0 * * * * * 0 3756 0 1000 S 44 3497 * 5453 4513 * 3754 2619 * 2606 3690 * 5385 * 3381 4416 2638 4691 * * * 44 0 * * * * 0 * 3661 0 1000 L 45 * * * * 2559 * * 4926 * 445 * * 4912 * * * * 5084 * * 45 0 * * * * * * 3781 0 0 L 46 * * * * * * * 2226 * 886 3569 * * * * 4558 * 3081 * * 46 0 * * * * * * 3781 0 0 K 47 5173 * 4148 1697 * * * * 1440 * 5131 3176 4958 5107 4698 * * * * * 47 0 * * * * * * 3769 0 0 R 48 4744 * * 3726 4757 4644 3684 * 735 * * 4934 * 5116 3837 * * * * * 48 0 * * * * * * 3767 0 0 L 49 3867 4704 * * 3319 * * 1763 * 1764 4940 * * * * * * 2546 * * 49 22 * 6077 * * * * 3749 0 0 R 50 * * 3020 4371 * * * 4690 4181 3361 5565 * 5051 4808 1312 3390 4264 * * * 50 60 * 4608 * * * 0 3752 0 1000 K 51 4095 * 4314 3886 * * * 5025 760 4532 4733 4966 * * 3956 5321 * * * * 51 43 * 5087 * * 1291 758 3755 0 1716 A 52 1484 * * * * 5090 * 5161 2822 3155 4752 * * 5266 5336 3791 * 4012 3852 4636 52 0 * * * * * 0 3720 0 1595 K 53 * * 5335 * 4683 4617 * 5021 1084 * * 3864 * 3450 2650 4889 * 4653 * * 53 94 * 3986 * * 1652 553 3720 0 1595 K 54 3229 * * 3046 * * * 4948 1727 4906 * 3838 5034 3226 2922 4690 5245 * * * 54 105 5105 4600 1000 1000 1761 505 3695 1000 2010 E 55 2335 * 4488 1663 5349 * * * 2547 4300 * 3414 * * 4545 * 4093 * * * 55 111 * 3756 * * * 0 3678 0 2178 A 56 1309 3385 * 4368 * 3019 * * * 4711 3109 4115 * 5258 * 4991 4067 * * * 56 67 4469 * 0 * * 0 3546 1000 2635 P 57 3138 * 5800 3350 * 5360 * 3897 3538 4177 * 3526 2644 2551 * 4495 3723 * * * 57 67 * 4458 * * 2497 281 3564 0 2635 P 58 1886 * * 2874 * * * * 2710 3385 * 5397 2484 5611 4947 4083 * 5428 * 7197 58 213 4507 3421 0 * 1920 443 3542 1000 2545 M 59 * * 3802 * * 1278 * * * 4291 3355 2440 * * * 2949 4226 * * * 59 42 * 5137 * * 1410 681 3399 0 2734 E 60 4918 * 3932 2130 * 3237 * * 2028 * * 3299 * 5370 4829 4001 5401 4398 * 5198 60 82 * 4186 * * * 0 3515 0 2364 K 61 * * 4006 3680 * * * 5118 652 * * 5249 4934 * 3974 5578 4716 * * 6273 61 122 * 3630 * * 2763 230 3477 0 2600 P 62 6074 * * * * 4215 * 4307 2807 * * 2248 1433 * 3806 4927 5605 4965 * * 62 39 * 5231 * * 784 1254 3529 0 2819 E 63 4251 * 4517 2362 * 4903 * * 1456 6195 * 5884 3548 4640 3982 * 6112 3690 * * 63 21 * 6105 * * 340 2253 3508 0 2188 V 64 8728 * * * * * * 2572 5357 4920 5125 5229 1750 * * 4438 3492 1814 * * 64 0 * * * * 919 1086 3541 0 1572 V 65 * * * * 6310 * * 720 * 3828 * * * * * * * 1858 * 4883 65 0 * * * * * 0 3476 0 1000 K 66 * * * * * * * 5950 782 * * * 6379 4274 1802 * * 4273 * * 66 0 * * * * 0 * 3502 0 1000 T 67 * * * * * * * 3162 * * * * * * * * 274 4029 * * 67 0 * * * * * * 3507 0 0 H 68 6387 * 6105 * 4999 * 1131 * 5566 * * 6804 * 3241 * * 4283 * 2150 3773 68 26 5783 * 1585 585 * * 3507 1000 0 L 69 3148 4040 5846 4255 6065 * * * 4033 2461 4856 4999 * 4557 * 1660 * 4056 * 6134 69 0 * * * * * * 3507 0 0 R 70 * * * * * * * * 4135 * * * * * 170 * * * 4203 * 70 0 * * * * * * 3736 0 0 D 71 3896 * 2212 6045 * 4883 5865 * * * * 2281 * * 2590 1983 5271 * * * 71 0 * * * * * * 3736 0 0 M 72 3091 4641 * * 5820 * * * * 3560 1861 4770 * * * 1511 3696 * * * 72 0 * * * * * * 3736 0 0 I 73 * * * * 6045 * * 2247 * 3808 4869 * 4971 6134 * 6703 1512 2249 * 4268 73 0 * * * * * * 3736 0 0 I 74 * * * * * * * 230 * * 4208 * * * * * * 3420 * * 74 0 * * * * * * 3731 0 0 L 75 7222 * * * 3483 * * 3642 * 999 4609 * * * * 5348 3868 3291 5467 3953 75 0 * * * * * * 3731 0 0 P 76 * * * * * * * * 4762 * * * 93 6406 * 6152 * * * * 76 0 * * * * * * 3729 0 0 E 77 4115 * 4563 1584 * 6016 * 4544 3233 5334 * 3681 * 3441 5817 2765 6396 6596 * 5657 77 0 * * * * * * 3729 0 0 M 78 5843 5440 5738 * 1892 * 4222 5357 * 3334 1256 * * * * * * * 6098 4034 78 0 * * * * * * 3768 0 0 V 79 * * * * 4804 4232 * 1900 * 3020 5357 * * * * * * 1014 * * 79 0 * * * * * * 3768 0 0 G 80 4232 * 3985 * * 603 * * 5324 * * 2463 * * * * 5731 * * * 80 0 * * * * * * 3768 0 0 S 81 5015 4561 * * * 5495 3149 4544 2355 1994 4829 4705 * 5562 4823 3034 6463 5491 * 5891 81 0 * * * * * * 3768 0 0 M 82 6844 * * 6045 6942 * * 3679 2889 4101 4089 4497 5864 4163 5305 4726 1608 4271 * 3688 82 0 * * * * * * 3768 0 0 V 83 6611 * * * 1725 * * 1456 * 4873 * * * * * * * 1891 * 5710 83 0 * * * * * * 3771 0 0 G 84 2234 * * 3837 5737 2101 4719 * 3481 4529 5405 4202 * 4321 4873 4792 4596 * * 4177 84 0 * * * * * * 3771 0 0 V 85 * * * * * * * 1821 * 5395 * * * * * * * 529 * * 85 0 * * * * * * 3771 0 0 Y 86 * * * * 5710 * 1452 * 5406 * * * * * * * * * * 757 86 0 * * * * * * 3771 0 0 N 87 * 5399 3328 * * * * * * * * 364 * * * 6783 6051 5483 * 4233 87 0 * * * * * * 3771 0 0 G 88 * * * * * 79 * * * * * * * * * 4233 * * * * 88 34 5406 * 0 * * * 3771 1000 0 K 89 * * * * * * 4090 5645 871 5753 5773 3276 * 4368 3158 * 6206 * * 4044 89 0 * * * * * * 3771 0 0 T 90 5496 * 4584 2626 * 4151 * 4058 2788 7058 * 4833 * 3517 4675 3155 2499 4188 * * 90 0 * * * * * * 3771 0 0 F 91 * * * * 748 * 3170 * * 5406 5845 * * * * * 6475 * 6050 2146 91 0 * * * * * * 3771 0 0 N 92 6893 * * 5029 3965 * 6481 1644 3976 4696 * 3065 * 5028 5406 5184 6241 2004 * * 92 0 * * * * * * 3771 0 0 Q 93 * * 4897 3962 * 5111 * * 2736 * 6220 4810 1408 3298 3043 4602 6050 * * 5792 93 0 * * * * * * 3771 0 0 V 94 * 4877 * * 4959 * * 1894 * 2761 * * * * 5845 6535 6495 1065 * * 94 0 * * * * * * 3771 0 0 E 95 5829 * 5399 1962 4967 * * * 2560 4339 * 5266 6517 3939 3341 5353 4019 * * 2606 95 0 * * * * * * 3771 0 0 I 96 * * * * 4805 * * 432 * 4828 * * 5368 * * * * 2611 * * 96 53 4805 * 0 * * * 3771 1000 0 K 97 * * 4915 5029 * 6850 * 6426 1759 5011 6614 3898 * 4809 6838 3709 1574 4175 * * 97 0 * * * * * * 3771 0 0 P 98 4002 * 4310 1569 5608 * * * 3607 * * 5765 1670 5153 4984 6206 5792 5406 * * 98 0 * * * * * * 3771 0 0 E 99 5305 * 2541 1248 * 3707 6051 * 5146 5075 * 4500 5331 5251 * 3633 4780 * 5645 * 99 14 6736 * 0 * * * 3771 1000 0 M 100 5865 * * * * * 5645 * 3384 * 361 * * * * 5740 4871 4805 * * 100 0 * * * * * * 3771 0 0 I 101 * * * * * * * 1227 6499 3008 * * * * * * * 1193 * * 101 0 * * * * * * 3771 0 0 G 102 * * * * 4290 159 * * * * * 4805 * * * * * * * 5829 102 0 * * * * * * 3771 0 0 H 103 6713 * * * 4902 * 725 * 4244 4400 * 4780 * * 3356 * 5158 * * 3474 103 0 * * * * * * 3771 0 0 Y 104 5096 * * * 4393 * * * 629 * * * * * 4430 * * 4700 * 2385 104 0 * * * * * * 3771 0 0 L 105 * * * * 2331 * * 4400 * 589 * * * 4233 * * * 4805 * * 105 0 * * * * * * 3771 0 0 G 106 4599 * * * * 157 * * 5399 * * * * * 5981 5483 * * * * 106 0 * * * * * * 3771 0 0 E 107 * * 4007 180 * * * * * * * 4780 * 5753 * * * * * * 107 0 * * * * * * 3771 0 0 F 108 * * * * 194 * * * * * * * * * * * * * * 2988 108 0 * * * * * * 3771 0 0 S 109 1369 * * * 6615 * 6333 4186 * * * * * 5779 * 1838 * 2076 * * 109 0 * * * * * * 3771 0 0 I 110 7265 6535 * * 2937 * 6030 3038 5829 2702 5218 3801 1955 6463 5368 4048 5845 6206 * 4050 110 0 * * * * * * 3771 0 0 T 111 * * * * * * * * * * * * 5307 * * 2846 259 * * * 111 0 * * * * * * 3781 0 0 Y 112 * 4180 * * * * * 5234 2822 * * * * * 738 * 4000 * * 3123 112 0 * * * * * * 3707 0 0 K 113 6561 * * * * * 6359 * 845 * * 3458 * 4061 4167 5288 2886 4237 * * 113 0 * * * * * * 3688 0 0 P 114 4345 * * 6153 2488 * 4771 3609 5528 * 5383 * 2510 5547 2808 4667 3860 3084 * 5142 114 0 * * * * * * 3665 0 0 V 115 * 4687 * 5211 3102 6427 * * 4821 * * * 3597 * 2764 5619 3381 1297 * 5827 115 0 * * * * * * 3555 0 0 K 116 * * * 3986 * 2457 * 4677 1691 * 5160 * 6091 4237 3308 2988 3588 * * * 116 0 * * * * * * 3557 0 0 H 117 * * * * * * 394 * * 5585 * * * * * * * * 5949 2308 117 0 * * * * * * 3547 0 0 G 118 3938 * * * * 383 * * 4827 * * * * * * 3787 4047 * * * 118 0 * * * * * * 3569 0 0 R 119 4550 * * 2907 * 4815 * * 1575 * * 4593 * 3469 2190 3296 * * * * 119 0 * * * * * * 3541 0 0 P 120 * * * * * * * * * * * * 0 * * * * * * * 120 0 * * 0 * * * 3339 0 0 //