HHsearch 1.5 NAME c9ogsF_ FAM FILE c9ogsF_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9ogsF_.a3m DATE Sat Nov 8 11:24:54 2025 LENG 81 match states, 81 columns in multiple alignment FILT 100 out of 292 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.0 EVD 0.3714 -2.4669 SEQ >ss_pred CCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC >ss_conf 904676232899999999706324219999999999999999999999999996699724899999999980887898889 >Consensus xrdxxxxIxKxxixriaxxxgxxrisxdaxxxlxxxxxxfixxixxxAxxxaxhxxRktixxxDVxxAlxrxgxxxyGfxg >c9ogsF_ LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG >UniRef50_A5K5C2(911-997:1058) CCAAT-box DNA binding protein subunit B, putative n=1 Tax=Plasmodium vivax RepID=A5K5C2_PLAVI E=3e-09 s/c=0.72 id=19% cov=84% ------------ISRIMKRIlpASAKVAKESKDIIRECVTEFIQFLTSEvraASDRCLRERRKTISGEDILFSMEKLGfndyvEPLYEY-- >UniRef50_B3RYW1(29-105:450) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RYW1_TRIAD E=1e-08 s/c=0.79 id=19% cov=93% -------LSLSTMKQWADQLGFGEVNDEVAALLSEDASYRIRHLIQVASEVMIHSKRTRMMTDDVNKAAKLcRLESIYGING >UniRef50_B0E6J7(9-85:194) Putative uncharacterized protein n=2 Tax=Entamoeba RepID=B0E6J7_ENTDI E=4e-08 s/c=0.77 id=20% cov=94% -----RKILKIAAAQIAMSAGYTDAKESALETIADVMEMYIQEIGKKTHQISEHNGRTESSFIDLLFAMEQLGIDIFSFG- >UniRef50_P49905(92-166:196) Transcription initiation factor TFIID subunit 12 n=16 Tax=Diptera RepID=TAF12_DROME E=3e-07 s/c=0.75 id=22% cov=91% -------LTKPRLTELVREVdTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDVQLHFERKYNMwIPGFG- >UniRef50_D2V9Z9(1-74:159) Predicted protein (Fragment) n=1 Tax=Naegleria gruberi RepID=D2V9Z9_NAEGR E=2e-06 s/c=0.72 id=22% cov=90% -----QNVPKDAIivEKILQSMGINEFEPRVIEQLLELVYRYITEVIEDSYVYMDHASRSDLDLEDIRLAIQTRVNHSY---- >UniRef50_B4JIU1(13-75:735) GH17238 n=1 Tax=Drosophila grimshawi RepID=B4JIU1_DROGR E=1e-05 s/c=0.80 id=21% cov=78% -------ISEKSLQAIAQQTITQTLSKDMVKKIGQCVREKFSNIIEDAVKGAKWSRSATVQKKHIIYAL------------ >UniRef50_Q750A4(74-148:204) DNA polymerase epsilon subunit D n=1 Tax=Eremothecium gossypii RepID=DPB4_ASHGO E=0.0002 s/c=0.62 id=22% cov=90% -RSIITSLAKDAVHqavQTAEQDPRVMLSKDASLALQRSSTVFVNHLLMHARQIAQSNDRKSCSGEDVLKALDQIG-------- >UniRef50_D2VWB2(101-182:186) Histone H3 n=1 Tax=Naegleria gruberi RepID=D2VWB2_NAEGR E=0.001 s/c=0.54 id=21% cov=69% -----------------------RFQANSLLALQEAAEAFIIDIFEDTNLCAIHSKRVTILLKDMQLALRVKGVNYIG--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 0 * * * * * * * * * * 1 0 * * * * * * 1575 0 0 R 2 * * * * * * * * 3032 * * * * * 188 * * * * * 2 0 * * * * * * 4058 0 0 D 3 2749 * 651 * * * * * * * * 3787 * * * 2815 * * * * 3 0 * * * * * * 4916 0 0 N 4 3823 * * 3986 3688 * * 3166 * * * 1410 * * * 3185 2389 * * * 4 0 * * * * * * 5138 0 0 I 5 * * * 2468 * * * 1314 * * 4147 3059 3809 * * * * 2563 * * 5 86 * 4107 * * * * 5258 0 0 Q 6 5306 * * 5258 * 4788 * * * * 4580 3040 * 1945 1866 3499 4543 * * 3581 6 0 * * * * * 0 5794 0 1000 G 7 3662 * * * 4604 1684 * * 2155 * * 4333 * * 2539 3632 * 4581 * * 7 0 * * * * * 0 5910 0 1000 I 8 * * * * * * * 849 * 1845 4008 * * * * * * 3259 * * 8 0 * * * * * 0 6839 0 1000 T 9 2958 * * * * * * 4858 3754 5217 3746 5444 2702 * * 1960 2648 3878 * * 9 28 * 5687 * * * 0 6904 0 1000 K 10 5619 * * 5391 * * * * 494 3849 * 4708 * 4910 4130 4391 * * * * 10 0 * * * * * 0 7062 0 1676 P 11 2729 * 2608 3182 * 4972 * 4466 3502 4050 * 4666 2950 * 4533 2865 * * * * 11 0 * * * * 0 * 7055 0 1676 A 12 2117 4987 5102 * 4112 * * 4076 4562 4344 5785 5961 4230 * 5113 2542 2619 5513 * 5192 12 0 * * * * * * 7279 0 0 I 13 4342 * * * 5068 * * 1234 * 2742 4275 * * * * * 5762 1857 * * 13 19 6255 * 1000 1000 * * 7248 1000 0 R 14 4118 * 5929 4407 * 4654 4192 6620 2246 5054 * 5965 3790 3044 2267 4920 4039 6509 * 6486 14 41 6019 6322 1585 585 * * 7248 1000 0 R 15 4171 * 4899 3732 6279 5893 * 6326 3252 6176 6531 5469 * 3155 1348 4206 4804 4435 * * 15 0 * * * * * 0 7216 0 1000 L 16 * 6111 * 6432 3465 * * 1537 6567 1744 3959 6752 * * * 5954 6004 3820 5153 5288 16 53 5304 6522 1237 796 * 0 7227 1708 1000 A 17 989 5835 * * 4714 * * 4980 6276 2833 4620 6527 * * * 4591 5898 2779 * * 17 0 * * * * * 0 7215 0 1576 R 18 4867 * 5170 2339 * * 6091 * 2105 4757 5634 5237 * 3638 1902 4388 6182 * * * 18 84 5345 4963 453 1893 * 0 7215 1595 1576 R 19 4992 * 6012 2776 * 4322 5368 4618 4097 * * 4329 * 3344 2510 1981 4561 6125 * * 19 40 5192 * 1000 1000 * 0 7194 1638 2124 G 20 2358 5921 4425 6267 4539 2521 5198 4046 6659 3964 4687 6170 * 6432 * 4009 4390 2709 * 5457 20 106 4087 6345 584 1587 1996 416 7217 2519 2124 G 21 4286 * * 6011 * 656 5923 5728 * 4060 * 6023 4626 5642 * 3938 4754 5323 * * 21 0 * * * * * 0 7265 0 2022 V 22 2906 5270 5658 6433 3975 5095 6459 2645 4109 4727 * 5372 4119 6648 4101 4179 4544 2466 * 5620 22 0 * * * * * 0 7309 0 2022 K 23 4414 * 3416 3197 * 4917 6110 6126 2547 * 5554 4744 6740 4515 4171 2996 2777 4345 * 5069 23 65 5033 6209 1572 591 1155 860 7385 2245 2022 R 24 * * 4260 4298 6175 5121 5526 5826 2615 * 4855 4238 4980 4111 1314 4473 5195 * * * 24 43 5085 * 1857 466 0 * 7513 2196 1969 I 25 5872 * * * 3652 * * 1427 * 2254 4153 * * * * 5583 * 2030 * * 25 35 5397 * 641 1479 * * 7422 2017 0 S 26 3981 * 3689 4342 5550 4757 * * 4619 * * 4776 4608 4880 6679 937 3891 * * * 26 0 * * * * * * 7428 0 0 G 27 3086 5215 2403 3711 * 3717 * * 1956 * * 4247 3965 4789 5221 4131 5687 * * * 27 31 * 5550 * * * * 7428 0 0 L 28 4400 * 1442 1761 * 5355 * * 6541 6549 * 4835 * 6586 3804 3842 4506 6269 * * 28 0 * * * * 0 * 7339 0 1000 I 29 1342 4212 * * 6387 6626 * 2984 * 5525 5526 * * * * 3391 4544 2174 * * 29 0 * * * * * * 7428 0 0 Y 30 3423 4872 * 3939 6447 * * 4426 2757 2896 5137 * 5294 6274 3725 5006 6887 3165 * 2526 30 0 * * * * * * 7428 0 0 E 31 3453 6233 2610 1780 * 4869 * 5667 3656 4696 6537 4583 5216 4241 4871 4491 4360 6791 * * 31 0 * * * * * * 7428 0 0 E 32 2387 6346 5412 2612 6791 * 6463 4309 4743 2402 5571 6887 * 4473 5731 4248 3501 4156 * 5530 32 0 * * * * * * 7428 0 0 T 33 5343 * * * 3566 5550 * 2123 * 1236 3920 * * * * 6330 4650 3363 * * 33 0 * * * * * * 7428 0 0 R 34 2665 6462 6025 5087 6742 5476 4651 6824 5435 2954 5188 4464 * 2985 2913 3036 5672 3639 * * 34 0 * * * * * * 7428 0 0 G 35 6336 * 2588 1924 * 6591 * 6074 3229 5555 6725 3628 6233 3285 3314 5035 4426 6288 * 6936 35 0 * * * * * * 7428 0 0 V 36 2865 2561 3570 4452 4269 * 4695 3636 5363 3886 5345 * * 4930 * 3705 * 3015 * 4551 36 0 * * * * * * 7435 0 0 L 37 2429 3481 * * 4718 5678 * 3733 * 2762 4317 * * * * 3445 3940 2231 6401 6306 37 0 * * * * * * 7435 0 0 K 38 * 6880 3130 1718 * 5871 5580 5543 3877 5957 * 4485 * 6697 4664 3215 3172 3568 * 4926 38 30 * 5582 * * * * 7435 0 0 V 39 4571 6498 3410 1878 4722 * * 4413 4364 4270 4803 5837 * 4435 3707 6960 6746 3886 5560 3144 39 0 * * * * 0 * 7351 0 1000 F 40 6312 * 6773 6466 937 * 5386 4837 5080 4441 6888 * * * 2745 5888 * * 6760 2982 40 0 * * * * * * 7432 0 0 L 41 4122 6225 * * 3270 6939 * 1853 * 2096 5307 * * * * 6116 6567 2024 * 6559 41 0 * * * * * * 7432 0 0 E 42 4276 5908 4043 3302 * 3987 4199 5722 2945 3456 6970 5687 * 4993 2759 3387 3671 4987 * * 42 0 * * * * * * 7432 0 0 N 43 5856 6146 3561 2097 3885 * 3733 4568 4056 5220 4883 4541 * 2870 5227 4494 6203 6116 * 3936 43 0 * * * * * * 7432 0 0 V 44 4657 * * * * * * 1501 * 2108 5533 * * * * * 5066 1628 * * 44 0 * * * * * * 7432 0 0 I 45 2542 5079 * * 4791 3921 * 3034 6139 2859 4405 * * * * 3097 2574 3470 * * 45 0 * * * * * * 7432 0 0 R 46 4057 5806 4016 2789 6774 3817 4648 6983 3644 4414 6433 4178 * 2986 3496 3149 4849 5702 * 6313 46 0 * * * * * * 7432 0 0 D 47 4479 4724 1734 2450 5362 6705 5500 6458 4030 4778 * 5892 * 3585 3566 5435 4696 5487 * * 47 0 * * * * * * 7432 0 0 A 48 651 5493 * * * 5773 * 6423 * 3395 4821 * * * * 3285 4470 4935 * * 48 0 * * * * * * 7432 0 0 V 49 3800 3487 * 4899 6602 6670 4985 4014 3734 4313 4552 3276 * 4561 5044 2767 3495 3694 6086 5619 49 0 * * * * * * 7432 0 0 T 50 3540 * 3823 2959 * 6203 * 3587 2137 4938 3798 * * 3695 4628 5409 3578 4029 * * 50 0 * * * * * * 7432 0 0 Y 51 5165 4514 * 6116 2272 5191 5189 3017 4808 3135 5143 5806 * * 5041 6570 * 3401 * 2342 51 0 * * * * * * 7432 0 0 T 52 1234 2685 * * * * * 6569 * 6779 2751 * 6301 6241 * 3318 3349 5210 * * 52 21 6084 * 0 * * * 7432 1000 0 E 53 5656 * 4421 2550 * * 5157 4499 2035 5351 5038 4711 6084 3094 3465 5429 3714 4989 * * 53 0 * * * * * * 7432 0 0 H 54 3993 6139 5755 4650 * 5613 1072 * 4481 5947 6091 3912 * 5790 5481 3413 * 6845 6307 3821 54 0 * * * * * * 7432 0 0 A 55 1974 5437 4141 3129 6466 3286 * * * * * 3774 * 5961 3044 2216 6397 * * * 55 18 6301 * 1000 1000 * * 7432 1000 0 K 56 5812 6093 5561 6084 * 2178 4095 * 1452 6091 * 3471 * 5274 3469 4292 6086 * * * 56 0 * * * * * * 7432 0 0 R 57 4543 * * * * * 6091 * 2899 * * * * * 435 3867 * * * * 57 0 * * * * * * 7432 0 0 K 58 4349 * 5219 6086 5584 6852 6301 * 1190 * 6832 5758 6241 3666 3189 3999 3283 4848 * * 58 0 * * * * * * 7432 0 0 T 59 6416 * 6626 4985 * * * 5639 3474 4846 5089 5599 * 4728 3894 5682 755 4848 * * 59 0 * * * * * * 7432 0 0 V 60 * 5253 * * 5599 * * 1390 * 2249 4359 * * * * 5885 * 1758 * * 60 0 * * * * * * 7432 0 0 T 61 4223 * 3067 3325 * 6731 * * 3765 4091 5613 3448 * 5447 4513 3202 1846 * * 5630 61 0 * * * * * * 7432 0 0 A 62 2527 5051 5870 4015 4001 3888 6348 3810 4928 4456 5554 * 3050 * 4703 5207 3067 3686 * 5584 62 0 * * * * * * 7432 0 0 M 63 4598 6086 2861 2105 6093 * * 4735 2942 * 6606 4992 * 3278 3784 3140 4644 5584 * * 63 0 * * * * * * 7432 0 0 D 64 * * 197 * * * 3277 * * * * * * * * * 5351 * * * 64 0 * * * * * * 7432 0 0 V 65 * * * * 5961 * * 1384 * 3970 4996 * * * * * * 1021 * 6299 65 0 * * * * * * 7432 0 0 V 66 4361 6362 4482 3939 4454 6731 * 3111 3534 2128 6736 3401 * 3090 5053 6852 4980 4282 * * 66 0 * * * * * * 7432 0 0 Y 67 4264 5961 6301 4076 3573 4851 5633 * 3869 2134 5036 4183 * 3577 3519 4479 5707 5494 5851 3951 67 0 * * * * * * 7432 0 0 A 68 673 5351 * * * 4644 4546 6139 * 3617 * * * * * 3525 4983 4725 * 6203 68 0 * * * * * * 7432 0 0 L 69 4380 5585 * * 4504 * * 3068 * 850 3157 * * * * 5348 6306 4316 6222 * 69 13 6855 * 0 * * * 7439 1000 0 K 70 4273 * 3942 2137 * 5269 * * 1930 * * 6200 * 2806 2779 4142 6851 * * * 70 154 3301 * 0 * * * 7390 2797 0 R 71 4596 * 3763 4071 * 6219 5295 * 3574 4294 * 5020 * 4229 1271 3372 5422 4910 * * 71 16 6532 * 0 * * * 7416 1000 0 Q 72 5254 * 6420 * 4179 5839 * 4120 3749 1697 3850 2944 * 3700 3511 5015 * 5788 * 4795 72 94 4889 5092 0 * * * 7352 1762 0 G 73 * 6432 5902 * * 739 * 5245 * 3598 * 3606 * 5713 * * * 3261 4605 5868 73 85 4126 * 517 1732 930 1074 7193 2012 1680 R 74 5470 * 4948 2351 2700 * 5732 3711 4501 3408 5774 3071 5544 4635 4042 5254 4162 5659 * * 74 101 5042 4743 0 * * 0 7196 1306 1000 T 75 4583 5912 4226 3970 * 5544 4601 5207 4517 * 4154 3904 1821 * 3507 3607 3121 * * * 75 91 4791 5322 0 * 1594 580 6986 1267 1976 L 76 4613 * 3608 4853 * * 4570 2310 * 1864 4795 5086 * 4832 5172 4490 * 4606 * 3182 76 37 5292 * 2000 415 0 * 6839 1000 2185 Y 77 * * * * 3474 * 4581 3797 * * * * 3358 5170 * * * * * 576 77 0 * * * * * * 6882 0 0 G 78 * * 3892 * 4986 272 * * * * * * 4986 * * 4602 * * * * 78 0 * * * * * * 6052 0 0 F 79 * * * * 625 * * 5097 * * * * * * * * * * * 1633 79 0 * * * * * * 5879 0 0 G 80 * 3767 * 2911 * 1003 * * 4260 * * 3920 * * * 2502 * * * * 80 0 * * * * * * 4781 0 0 G 81 3426 * * * * 141 * * * * * * * * * * * * * * 81 0 * * 0 * * * 3977 0 0 //