HHsearch 1.5 NAME c9ogmM_ FAM FILE c9ogmM_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9ogmM_.a3m DATE Sat Aug 2 11:20:03 2025 LENG 97 match states, 97 columns in multiple alignment FILT 111 out of 2852 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 9.2 EVD 0.4533 -0.1924 SEQ >ss_pred CEEECCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCHHHCEEEEEEEEECCCCCEEEC >ss_conf 9364466399848980999999438887269995699862367631411566554028998508669999701683528899999993405824859 >Consensus vvxQxpxxxxvxxGxxvtlxCxxsxxxxxxwxxxxxxxxxxxxxxxxxxxxxxxxxrxxxxxxxxxxxLxIxxvxxxDsGxYxCxxxxxxGxgTxlx >c9ogmM_ VLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQ >UniRef50_C3ZLK8(489-580:728) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZLK8_BRAFL E=6e-06 s/c=0.57 id=20% cov=95% VVT-EASSVSAAGGDTVELTCTIASDPVPeEIVWTLAGEDGKKTTYRTGRTGDVFVKKTKIVEDKIQSVLLINSAESAHTGDYVCIASNMFGQ----- >UniRef50_Q9H106(32-137:197) Signal-regulatory protein delta n=6 Tax=Homo sapiens RepID=SIRPD_HUMAN E=3e-07 s/c=0.53 id=19% cov=87% -VQQTEMSQTVSTGESIILSCSVPNtlpNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYC------------- >UniRef50_C3XRK3(28-128:480) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XRK3_BRAFL E=2e-05 s/c=0.50 id=19% cov=91% -----PSTIHVVRGQTVTLPCTYtmshpSGDLTITWWREPTVSSDTRQIVHEARRPGDPVGRGYNQWEGrtslaGQASLRMETVGTEDAGTYECEIRNFQ HG----- >UniRef50_UPI00017B327C(76-151:1550) UPI00017B327C related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B327C E=0.0003 s/c=0.61 id=20% cov=67% -------SKAVSENCNVKFSCVVTGHP-----------APQLLWYKEDMQLDRYCglPKYEIFHNGHHHSLHIYNCTLEDAAIY--------------- >UniRef50_UPI000155BBD1(23-115:262) PREDICTED: similar to TRAV6-6 n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BBD1 E=7e-06 s/c=0.56 id=19% cov=92% -VIQTQGQVTLEKGAPLILKCTYDttFTTYPFWYVRFPKKNLRLLLKDTNeeeQKESSDGFHAKHDKDSKSFDLKKDAVTLEDSAVYYCAAGNT------ -- >UniRef50_Q9IAL5(32-125:226) T-cell surface glycoprotein CD8 alpha n=5 Tax=Salmoninae RepID=Q9IAL5_ONCMY E=0.0006 s/c=0.48 id=19% cov=87% -------------GERVEITCapvSKTKSNMVIWFRVQDNAGMEFIASFstkdGMKKTDFNNEVFSEEQINKNILILKAFKKARDSGVYSCASINgnalV FGEVTRL- >UniRef50_Q4RRD0(109-202:214) Chromosome 16 SCAF15002, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4RRD0_TETNG E=0.0009 s/c=0.47 id=16% cov=94% ------SNVTARLGSSVTLECGASVPSIFIWGFTKSGTDNNVALAYNYGGASKLQAQSgslgHVRVPVNTSALVVEKLRKDAEGMYTCQALYDSDQGARV - >UniRef50_P04212(25-133:136) T-cell receptor beta chain V region LB2 n=2 Tax=Mus musculus RepID=TVB4_MOUSE E=2e-05 s/c=0.46 id=19% cov=100% IITQTPKFLIGQEGQKLTLKCQQNFNHDTMYWYRQDSGKGLRLIYYSITENDLQKGDLSegydaSREKKSSFSLTVTSAQKNEMTVFLCASSIrlasaet lYFGSGTRL- >UniRef50_Q90Z84(142-244:337) Novel immune-type receptor 4a n=14 Tax=Danio rerio RepID=Q90Z84_DANRE E=0.0003 s/c=0.45 id=20% cov=99% -VIQLPVHAVINPGSNVTLRCsverKTCDKDVQSVYWFRQSSNTTHQGIVYTHGKSKNECADSSDTQSCLQNLAKMSVDVSEAGLYYCSVVTcdevLFGN GTTL- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * V 1 * * * * * * * 2089 * 2476 * * * * * * * 773 * * 1 0 * * * * * * 7374 0 0 L 2 * * * * 5940 * * 2419 * 1996 * * * * * * 5143 950 * * 2 0 * * * * * * 8573 0 0 T 3 * * 4500 5064 * * 6240 4087 5128 4398 * 5882 * 2472 6199 2365 1539 6051 * 6202 3 79 5599 4925 0 * * * 8679 1000 0 Q 4 5938 * * * * * 6185 * 5082 * 5681 * * 317 * 5876 4592 4062 * * 4 21 * 6079 * * 0 * 8791 0 1717 S 5 3912 * 6036 3528 * 4346 5344 5154 5884 4372 * 4790 2859 3730 * 2653 2575 4026 5214 * 5 16 * 6542 * * 0 * 8921 0 1000 P 6 4167 * 5373 3662 * * * 6460 4708 4983 * 6593 743 4542 6470 4982 4207 6380 * * 6 38 6785 5895 1000 1000 0 * 9219 1000 1000 G 7 2930 * * 3416 5456 3511 6290 4752 3413 5606 * 5631 3871 4045 3784 2704 3861 4150 * * 7 41 * 5148 * * 0 * 9216 0 1000 T 8 4304 6293 3737 6599 3736 6385 4827 4920 * 4369 * 3391 * 4303 6337 1844 3146 4395 6308 4738 8 23 6002 * 2807 222 0 * 9235 1000 1927 L 9 4978 * * 5081 6456 6387 * 2680 3878 2187 4106 * * 4336 * * 3683 1920 * 5501 9 0 * * * * * * 9248 0 0 S 10 3506 * 6822 3929 5400 6535 6561 3509 5900 3914 5620 4871 6929 4169 5018 3536 1858 3581 * 5228 10 27 5748 * 1442 662 * * 9253 1727 0 L 11 2118 6826 * 5589 * 3745 6538 5542 4423 4184 * 5370 * * 5067 6632 4737 1257 6425 * 11 11 * 7008 * * * * 9358 0 0 S 12 3883 * 6736 3710 4960 6513 4486 6940 3554 3408 * 3545 4654 2910 3306 3479 3595 4673 * * 12 0 * * * * 0 * 9359 0 1000 P 13 3514 * * 1970 * 6720 * 4859 4464 2964 6782 * 3422 3827 5112 4873 3861 2890 * * 13 0 * * * * * * 9358 0 0 G 14 5984 * 5214 6826 * 429 * 6337 6552 * * 3560 * 5570 4635 4771 * * * * 14 0 * * * * * * 9359 0 0 E 15 6533 7048 2477 1941 * 4540 5473 * 3341 5321 * 4880 * 2792 5674 3307 4227 * * * 15 0 * * * * * * 9362 0 0 T 16 5674 6002 3779 5247 * 6726 * 6786 5113 5178 5947 2740 4823 5563 3909 2234 1974 4854 * * 16 14 6735 * 2585 263 * * 9362 1000 0 A 17 2535 * * * 4869 5527 6566 3918 * 3352 6662 * * * * 6726 6340 823 * * 17 0 * * * * * * 9362 0 0 I 18 6726 * 5899 3542 * 6590 4509 3528 3989 4302 5947 4311 * 4449 5335 4428 1333 4246 * * 18 10 7133 * 1000 1000 * * 9362 1000 0 I 19 * * * * 2407 * * 3142 * 798 4599 * * * * * 6053 4148 * 6613 19 0 * * * * * * 9362 0 0 S 20 4700 * 5073 3786 5928 5728 4800 5776 3918 6792 * 3579 3337 4170 3630 3072 2420 5304 6292 4971 20 0 * * * * * * 9362 0 0 C 21 * 21 * * * * * * * * * * * * * 6131 * * * * 21 172 3347 6131 1673 543 * * 9362 4913 0 R 22 4397 * 4691 3186 7027 5612 6542 6624 3376 6682 * 3629 6073 4048 3678 2865 2167 5765 5689 5886 22 58 4658 * 1515 621 * 0 9346 2847 1000 T 23 2898 6517 6434 6549 3018 6731 5127 3907 6535 4319 6182 6841 5021 5093 * 4197 3950 2340 * 2792 23 217 2942 6718 1595 580 * 0 9346 5659 1000 S 24 5611 6251 3341 4237 5819 * 5210 5217 3615 6614 6440 4066 5093 5997 4810 1393 3455 5194 * * 24 187 3039 * 2097 384 803 1229 9334 5448 1562 Q 25 3744 * 3183 6691 4966 2168 7001 5878 4101 4264 * 4698 3999 3887 4943 2737 4484 6505 * 6785 25 151 3327 * 1832 476 * 0 9345 4957 1000 Y 26 4681 * 3465 4803 4884 5227 3756 4789 4231 3791 5774 2947 4427 6795 5365 2613 4449 5079 6310 4077 26 48 4932 * 1472 645 * 0 9345 2921 1000 G 27 4902 5305 3002 6763 5727 4158 3848 6443 5385 4567 4768 3197 2098 5241 * 3603 4635 * * 4133 27 102 4046 7042 2188 358 * 0 9345 4089 1000 S 28 3007 6810 4684 4512 5801 5874 3707 5395 4591 6308 5538 5323 4280 4229 4197 3075 5645 3427 6542 2773 28 133 4024 5220 1179 841 * 0 9344 3899 1603 L 29 5076 * 6570 6466 5102 5157 * 2475 5066 3316 3424 7113 3617 6217 6323 4022 4128 2086 6943 6520 29 30 5607 * 0 * * 0 9302 1682 3267 A 30 6175 * 5066 4790 3642 6661 3776 3866 4654 4133 4520 3949 6570 3516 5161 3364 5701 4709 4607 2625 30 77 5366 5188 1213 815 * 0 9302 2309 3267 W 31 5575 * * * 4111 * * 3824 * 4164 * * 6630 * 6340 * 6311 3595 638 4857 31 27 7066 6459 0 * 1730 518 9259 1000 4350 Y 32 6553 5598 * 4543 2580 5430 5445 3787 6436 3942 5054 * * 5931 6614 5069 4916 3934 4991 1527 32 39 6991 5724 1585 585 * 0 9252 1000 3853 Q 33 * 6315 6263 * 5716 5368 5894 6719 2359 6624 * 6739 * 3469 1577 5670 * 6614 2162 6420 33 31 * 5557 * * 1450 657 9244 0 4591 Q 34 4691 * 5035 5626 4388 4613 3980 5524 3989 5721 5217 * 5403 1988 3987 4259 4996 4219 3848 3598 34 56 5579 5885 2511 278 2794 225 9245 1723 4206 R 35 4380 5540 4489 6791 5089 5667 5521 6052 2621 4652 4948 3272 5000 3332 3515 4754 2988 6510 4255 6907 35 41 5744 6689 2000 415 2811 222 9255 1669 4387 P 36 4710 5416 3434 4769 6631 5142 * 5626 3598 4794 5858 3782 2228 4484 4154 2655 5083 5020 * 6878 36 76 4509 7089 2872 212 3029 189 9252 3321 4324 G 37 5316 * 4258 5130 * 1346 4854 * 5063 * * 3263 5141 4772 4456 3223 4700 5677 4921 5412 37 91 4027 * 1597 579 1026 974 9257 3766 4377 Q 38 3891 * 6497 3631 6817 2925 6773 * 3486 5630 * 3910 5936 2943 5662 2081 3997 6498 * 4682 38 14 6669 * 3322 152 2322 322 9299 1000 2937 A 39 3350 5427 3968 4528 * 3143 6892 5502 4186 5292 5431 4625 3339 3730 4131 3593 3599 4081 7003 5638 39 24 6750 7057 0 * 2127 375 9302 1000 2578 P 40 6117 5631 4165 4797 5728 4137 5087 4000 3845 2696 5496 4646 1802 5357 5659 7022 4310 6537 6501 6780 40 25 5846 * 2350 315 401 2042 9313 1613 2556 R 41 4190 * 5337 3050 4482 6347 5395 5358 3217 3619 5118 4371 5505 2857 4304 4530 4399 3291 * 5330 41 35 5953 6982 1585 585 0 * 9346 1725 1000 L 42 5279 * 6766 5339 3372 6538 4098 3918 4497 2128 5741 5027 5789 6863 3525 3760 4288 3502 6839 4310 42 11 7105 * 0 * * 0 9362 1000 1000 V 43 4692 6565 5220 4236 4915 5657 5066 2622 4891 2420 6451 4588 6585 4583 6426 5218 4114 2863 6887 4116 43 55 6564 5205 1585 585 * 0 9362 1000 1000 I 44 3897 6390 5748 5342 3861 3597 6213 3039 6769 2372 6737 3774 5821 6497 6985 4383 4253 3608 5244 4037 44 43 5088 * 1950 432 1983 421 9325 2733 2651 Y 45 4646 7159 5332 * 3827 4006 4233 4479 4729 4331 * 4047 6160 5219 3141 3214 5617 4435 5403 2341 45 0 * * * * 1585 585 9324 0 2232 S 46 4634 * 4751 4926 3482 3821 4420 4317 4712 4542 6960 4228 5428 3985 3854 2969 3896 3884 5922 4175 46 41 5172 * 2726 236 0 * 9333 2359 1721 G 47 4234 * 4775 3389 4544 2674 4406 5771 4609 5226 5673 3489 5336 4682 4293 3131 3844 4731 * 4744 47 39 5222 * 2510 278 * * 9361 2191 0 S 48 4610 * 3294 4124 3921 3068 6620 5031 4402 4765 5042 3849 4139 5846 3600 3622 3518 5785 * 4424 48 33 5488 * 2232 345 * * 9361 2341 0 T 49 4755 6088 4047 4184 4245 3248 4614 5205 4481 4263 4627 3641 6573 4504 3938 3431 3484 4233 5836 5901 49 60 5983 5310 2000 415 * * 9361 1000 0 R 50 5543 6764 5058 3662 5537 3525 6309 4787 3955 4233 6772 3447 4906 3616 3581 2989 4180 3982 * 4583 50 85 4711 5739 2549 270 0 * 9347 2862 1801 A 51 4132 * 3607 3423 4892 3607 4397 4814 3589 4598 4593 3449 3345 4883 5628 3854 4898 4151 * * 51 20 6192 * 1961 428 * 0 9330 1763 1692 A 52 4259 * 3490 3419 4955 3485 * 6560 5044 4121 5636 4500 3022 5133 4136 2852 3747 4592 * 5785 52 12 * 6923 * * * 0 9330 0 1692 G 53 6771 5494 4093 3957 3610 2513 6087 5220 3516 4673 * 4889 5898 4734 3575 4045 4218 3244 * 5130 53 12 6971 * 1000 1000 * 0 9321 1000 2316 I 54 5336 5260 4660 4736 3734 3584 4608 5353 3487 3801 6510 3248 4355 3704 6407 4236 4433 3842 7031 4140 54 59 4652 * 1773 499 * 0 9321 2855 2316 P 55 5296 5946 3256 3835 5459 4272 5855 6327 3526 6554 5977 3532 4251 3821 3302 2411 5576 5107 7119 6683 55 56 5283 6311 2358 313 * 0 9321 2240 2316 D 56 4271 5455 2785 3660 5683 2475 5855 5824 3709 4310 * 4454 4078 5047 6071 3275 4723 5698 6525 5722 56 99 4713 5134 2259 338 1790 493 9295 2812 2676 R 57 5574 6535 4009 4485 * 5273 3652 5400 2932 5160 5752 6051 6607 5071 1300 5770 5188 5486 * 5284 57 12 6970 * 1000 1000 951 1051 9266 1000 3545 F 58 5228 6133 6179 4898 1744 4889 5240 3407 5686 3395 6824 5867 6852 6432 4832 4066 5079 3849 * 3263 58 59 4630 * 2050 399 * 0 9327 2824 2224 S 59 3767 5964 5793 4099 5793 4476 5716 5263 4461 6718 6887 3612 5089 4193 4417 2064 2831 4592 * 5114 59 147 3369 * 1455 655 555 1646 9327 4685 2224 G 60 4078 * 4795 3822 4256 2651 * 3142 4512 4879 4570 4704 5025 4654 6725 3601 4300 3045 * 5901 60 51 5187 7072 1439 664 0 * 9344 2371 1000 S 61 4656 6740 3343 4467 4420 5037 4868 4833 4236 5686 7063 3196 6727 5046 2905 2967 3730 5196 5245 4589 61 30 5586 * 0 * 0 * 9361 1757 1000 R 62 4879 * 4004 5646 5428 4038 6760 4152 2865 4663 6096 4816 4637 4017 3599 2865 3523 3836 5817 6539 62 36 5337 * 2113 379 * * 9361 2295 0 W 63 4879 * 2835 3895 4481 3875 4928 5653 4453 4393 4882 3501 6518 4154 4767 2973 3663 6748 7177 4286 63 123 3779 6871 2139 372 * * 9361 4686 0 G 64 5226 * 3964 3472 5686 2923 6967 6783 3893 6662 5766 3128 4968 3174 3828 3344 3899 4008 * * 64 52 5206 6964 2193 356 * 0 9348 2330 1000 P 65 5125 4970 4365 4810 6560 2494 6719 5488 2691 * 6595 2971 5957 4244 4203 3358 3282 5716 * * 65 38 5816 6874 595 1565 1032 968 9349 1828 1587 D 66 4879 5966 3638 3550 4722 5529 6514 4897 5242 4526 * 2618 6546 3691 4029 3078 3167 4331 * 5731 66 40 5189 * 2664 248 * 0 9339 2285 1617 Y 67 2663 4024 * 6074 2212 4681 4512 5659 5188 3668 * * * 6228 5665 2879 6754 4160 6686 3359 67 48 4933 * 1159 857 0 * 9339 2329 1617 N 68 4811 * * 5424 6789 5775 4084 4139 5735 5092 * 3099 6129 5487 5413 1875 2367 4285 5450 4938 68 47 4976 * 2225 347 * * 9361 2263 0 L 69 * * * * 4780 * * 3361 * 285 5927 * 6739 * * * * 5672 * * 69 15 6615 * 1000 1000 * * 9361 1000 0 T 70 6271 * 6567 3324 * * 4336 4298 3782 4367 * 4599 6542 3741 3075 3930 1890 3751 * * 70 0 * * * * * * 9361 0 0 I 71 * * * * 5808 * * 882 4548 2282 4297 * * * * * * 2835 * * 71 0 * * * * * * 9361 0 0 S 72 4570 * 5198 4350 4363 6022 5555 5766 3235 4076 6271 4160 5901 4100 3883 2511 2578 6915 * 4332 72 0 * * * * * * 9361 0 0 N 73 4420 * 3360 4145 6554 4354 3451 * 3871 * 6615 1762 5235 4907 4278 2706 6594 * * * 73 0 * * * * * * 9361 0 0 L 74 2622 7058 * * 5764 * * 3142 6554 2039 4847 * 6351 * * 5185 4299 1648 * * 74 0 * * * * * * 9361 0 0 E 75 * * 3949 3535 6988 5037 * * 3392 5315 * 4375 6324 2366 3123 2614 2840 * 6803 6826 75 0 * * * * * * 9361 0 0 S 76 4797 * 6843 4803 * 6425 * 4089 2978 2350 4767 6748 2949 5717 5589 3306 4372 2714 * 6827 76 13 6779 * 0 * * * 9361 1000 0 G 77 4655 * 3847 2025 * 4379 6870 * 4875 * * 3107 6568 4078 4847 1716 5083 * * * 77 0 * * * * * * 9361 0 0 D 78 6518 * 216 4926 * * 5751 * 6876 * * 5387 * 4985 * * * * * 6324 78 0 * * * * * * 9361 0 0 F 79 2898 * 4803 2482 7177 * * 6787 5350 5753 5082 6827 6779 4856 5962 1690 2734 4895 * * 79 0 * * * * * * 9361 0 0 G 80 2555 * 4851 * * 447 * * * * * * * * * 4923 5647 6842 * * 80 0 * * * * * * 9361 0 0 V 81 6979 * 3323 3938 * * 6539 3014 4879 3193 4376 5470 6707 6577 5601 4666 2108 2997 4979 6760 81 0 * * * * * * 9361 0 0 Y 82 * * * * 3958 * * * * * * * * * * * * * * 96 82 0 * * * * * * 9361 0 0 Y 83 * 6429 * 4009 2431 * 5128 4821 * 3833 6576 * * 5319 4398 5132 2704 4056 5137 1982 83 0 * * * * * * 9359 0 0 C 84 * 45 * * * * * * * * * * * * 6061 * * * * 5967 84 73 4344 * 2214 350 * * 9364 3330 0 Q 85 1992 * * 3543 5821 3541 4876 5166 4483 5552 5686 5484 * 3273 4906 3395 6583 2890 * 6338 85 71 4375 * 2983 195 * * 9243 2818 0 Q 86 1492 6339 * * 5242 * 5509 3787 4788 5417 6117 * * 4939 * 3371 3691 2285 * 5291 86 100 4252 6112 1902 449 * * 9189 2508 0 Y 87 6198 * * 3460 3285 4834 5279 4738 6046 4461 6040 5084 * 4438 4349 2099 3787 4879 3514 3904 87 41 5165 * 3000 193 0 * 9224 1387 1000 E 88 * * 2732 3363 6265 5208 4874 4615 * 4754 * 1576 * 6014 5171 3140 4234 6409 * 4532 88 180 3090 * 2282 332 * * 9172 4104 0 F 89 3839 * 5185 5236 3822 6458 5215 4601 4840 4954 4649 5030 * 5108 4641 3420 2408 2814 * 3393 89 82 4599 6173 2559 268 * * 9115 2250 0 F 90 4481 5134 * 4464 1302 5899 6165 5138 6314 3780 * * * 3578 5370 4024 * 4541 4486 3746 90 19 6246 * 2000 415 0 * 8916 1000 1000 G 91 * * 4518 * * 298 4363 * * * * * * * * 4748 5009 5250 * * 91 0 * * * * * * 8849 0 0 Q 92 3877 * 4671 4126 * 4050 * * 4260 * * 2740 3747 2614 3375 2475 4083 * * * 92 43 5099 * 1000 1000 * * 8426 1000 0 G 93 3625 * 5444 * * 488 * * * * * * * * * 3834 3484 5409 * * 93 33 5455 * 1585 585 * * 8221 1000 0 T 94 3454 * * * * * * * * * * * * * * 4249 224 * * * 94 40 5183 * 1585 585 * * 7958 1000 0 K 95 * * 5227 4106 * * * 5243 2213 * 5157 * * 3282 1534 3625 4117 5082 * 5113 95 0 * * * * * * 7572 0 0 V 96 * * * * * * * * * 445 * * * * * * * 2124 * 4804 96 0 * * * * * * 7145 0 0 Q 97 * * 3826 2358 * * * * 2791 * * * * 969 3662 * * * * * 97 0 * * 0 * * * 5485 0 0 //