HHsearch 1.5 NAME c9npxN_ FAM FILE c9npxN_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9npxN_.a3m DATE Sat Jun 14 10:04:38 2025 LENG 82 match states, 82 columns in multiple alignment FILT 28 out of 30 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.3 EVD 0.4224 0.3789 SEQ >ss_pred CCCHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCCCEEEEECCCCEEECCCCEEEECC >ss_conf 9621101888899886444421010698037999808887701797267648994566743454248504841784588639 >Consensus xlxxDllxpxxxxexxxhKxkrLvxxPnSxFmxVkCxxCxnixivFShAxtxVxCxxCgxxLxxPTGGKaklxxxxxfxxxx >c9npxN_ PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQ >UniRef50_A0RY94(8-56:224) Ribosomal protein S27E n=1 Tax=Cenarchaeum symbiosum RepID=A0RY94_CENSY E=4e-07 s/c=1.14 id=40% cov=61% -----------------------VPEPTSRFVKIECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKAVL---------- >UniRef50_A2DB88(4-83:86) Ribosomal protein S27 n=4 Tax=Trichomonas vaginalis RepID=A2DB88_TRIVA E=2e-22 s/c=1.34 id=41% cov=99% -LDVDILHPTVEQEAHTNKKMTLVPNPRSEFLSLRCPSCTGLTTAFSHSNVPVFCKNCQTPLATPTGGRILLADQVEIRPR- >UniRef50_Q8SS34(1-79:85) 40S RIBOSOMAL PROTEIN S27 n=1 Tax=Encephalitozoon cuniculi RepID=Q8SS34_ENCCU E=2e-22 s/c=1.35 id=36% cov=98% -MASDLAFPTREKVGSTYKKDRLYREGNGFFMYVRCGGCRHTTCCYSHSQTNISCPGCGDIILTSSGGRAVVSPNCEFKK-- >UniRef50_Q3LW62(9-85:93) Ribosomal protein S27 n=1 Tax=Bigelowiella natans RepID=Q3LW62_BIGNA E=1e-21 s/c=1.34 id=44% cov=95% ----DLSNPSKKTEAKKHKLKRLIQSPNSHYIATKCLKCKKINIIFSHSVFWKTCVDCSTLLTRPSGGKFKSSKSMQIVKR- >UniRef50_A4WLR8(7-60:67) 30S ribosomal protein S27e n=20 Tax=Archaea RepID=RS27_PYRAR E=6e-15 s/c=1.51 id=46% cov=66% --------------------KVLIPQPRSKFVKIRCPDCGNEQVTFSHAAMVVRCLVCGRVLAQPTGGKAKFA--------- >UniRef50_A9A5Z8(2-61:65) Ribosomal protein S27E n=2 Tax=marine archaeal group 1 RepID=A9A5Z8_NITMS E=1e-11 s/c=1.18 id=35% cov=67% -----------------------IPKPSSKFQKVNCNECGELQIVYSHASTQVACNSCGNAIAEATGSKAKINGKVS----- >UniRef50_Q9HIX2(13-61:65) 30S ribosomal protein S27e n=4 Tax=Thermoplasmatales RepID=RS27_THEAC E=1e-07 s/c=1.17 id=33% cov=51% ---------------------------NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG-------------- >UniRef50_UPI0001C41C05(4-50:59) ribosomal protein S27e Rps27e n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41C05 E=4e-07 s/c=1.19 id=29% cov=59% -------------------------NGRGNFLRVKCLDCDNEQIIFDRAASDVKCIICGKTIVKSRGGKAKI---------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 1490 0 0 L 2 * * * * * * * 3378 * 859 1505 * * * * * * * * * 2 0 * * * * * * 2522 0 0 A 3 1319 * 3003 2310 * * * * * * * 3519 * * * 4250 * 2909 * * 3 0 * * * * * * 2522 0 0 K 4 * * * * * * * * 2490 * * * * 3947 2662 2646 * 1186 * * 4 0 * * * * * * 2522 0 0 D 5 * * 0 * * * * * * * * * * * * * * * * * 5 0 * * * * * * 2632 0 0 L 6 * * * * 4253 * * 3160 * 259 * * * * * * * * * * 6 0 * * * * * * 2632 0 0 L 7 2861 * * * * * * 4796 * 475 * * * * * 3222 * * * * 7 0 * * * * * * 2667 0 0 H 8 * * * * 2861 * 1555 * * * * 1393 * 3722 * * * * * 3930 8 0 * * * * * * 2667 0 0 P 9 * * * * * * * * * * * * 114 * * * 3722 * * * 9 0 * * * * * * 2667 0 0 S 10 3722 * 3930 4148 * * * 3653 * 4397 * * 4562 * * 1874 1474 * * * 10 0 * * * * * * 2667 0 0 P 11 2086 * * * 4796 * * * 3222 * * * 1741 * 2861 * * 3251 * 3653 11 0 * * * * * * 2667 0 0 E 12 2409 * 4915 1020 * * * * 2564 * * * * 4219 * * * 3995 * * 12 0 * * * * * * 2824 0 0 E 13 * * * 1844 * * * * 2432 2776 * * * 3445 4219 2733 3410 * * * 13 0 * * * * * * 2824 0 0 E 14 * * * 296 * * * * 4299 * * * * * * * * 2894 * * 14 0 * * * * * * 2824 0 0 K 15 1572 * * * * 2894 * 4219 1978 * * * * 2861 3574 * * * * * 15 0 * * * * * * 2824 0 0 R 16 * * * * * * 3452 * 2321 * 3661 * * 3889 1214 2934 * * * * 16 0 * * * * * * 2840 0 0 K 17 3920 4305 * * * * 4438 * 843 * * * * 5398 4893 * 2170 * * * 17 68 * 4438 * * * * 2840 0 0 H 18 * * * * * * 516 * * * * 2615 * * * * * * * 2861 18 0 * * * * 0 * 2847 0 1000 K 19 * * * * * * * * 0 * * * * * * * * * * * 19 0 * * * * * * 2840 0 0 K 20 * * * * 3889 * * * 923 1560 3920 * * * * * * * * * 20 0 * * * * * * 2840 0 0 K 21 * * 3053 * * * * * 433 * 3656 * * * 4072 * * * * * 21 0 * * * * * * 3024 0 0 R 22 * * * * * * 3206 * * * * 3985 * * 703 * 2778 3874 * * 22 0 * * * * * * 3024 0 0 L 23 * * * * * * * 3749 * 111 * * * * * * * * * * 23 0 * * * * * * 3024 0 0 V 24 * * * * * * * 1486 * * * * * * * * * 910 * 3176 24 0 * * * * * * 3234 0 0 Q 25 * * * * * * * * * * * * 1125 1215 3176 * * * * * 25 0 * * * * * * 3234 0 0 S 26 3793 * * 2629 * 3888 4261 * 4029 * 4512 2430 * 4467 * 1905 4519 * * * 26 0 * * * * * * 3482 0 0 P 27 * * * * * 2598 * * * * * * 260 * * * * * * * 27 0 * * * * * * 3482 0 0 N 28 * * * * * * * * * * * 898 * * 1865 3027 3918 * * * 28 0 * * * * * * 3610 0 0 S 29 * * * * * 2626 * * * * * * * * * 255 * * * * 29 0 * * * * * * 3643 0 0 Y 30 * * * 3995 3186 * 2907 * 2972 * * 4449 * * 3346 4989 * * * 1355 30 0 * * * * * * 3643 0 0 F 31 * * * * 125 * * * * * * * * * * * * * * 3591 31 0 * * * * * * 3900 0 0 M 32 * * * * * * * 2246 * 1964 1603 * * 4459 * 4657 * 3077 * * 32 0 * * * * * * 3900 0 0 D 33 3591 * 1795 3668 * * * * 1990 * * 4354 * * 2922 4115 * * * 4061 33 0 * * * * * * 3900 0 0 V 34 * * * * * * * 2023 * 4115 5529 * * * * * 3591 757 * * 34 0 * * * * * * 3900 0 0 K 35 * * * 4188 * * 4330 4354 876 * * 4459 * 4588 2431 * * 5096 * * 35 0 * * * * * * 3900 0 0 C 36 * 100 * * * * * * * * * * * * * * * * * 3894 36 0 * * * * * * 3900 0 0 P 37 3656 * 4330 4188 * 4061 * 5348 4354 2266 * 3555 1704 5735 4820 5123 * * * * 37 0 * * * * * * 3900 0 0 G 38 * * 2032 4457 * 1531 * * 2625 * * 4353 * 4636 * 3149 * * * * 38 0 * * * * * * 3900 0 0 C 39 * 62 * * * * * * * * * * * * 4580 * * * * * 39 0 * * * * * * 3900 0 0 Y 40 * * 4459 3659 3890 1945 * * 2542 5709 * * * 3651 4058 * 4113 * * 2644 40 0 * * * * * * 3900 0 0 K 41 4665 * 4665 3517 * 4113 4058 * 2120 * * 1281 * * * 4186 5677 * * * 41 0 * * * * * * 3900 0 0 I 42 * * * 2412 * * * 1549 4353 3275 * * 4186 4991 * * 3330 2918 * * 42 0 * * * * * * 3900 0 0 T 43 * * * * * * * * * * * 2922 3890 1435 * 5113 1465 4665 * * 43 0 * * * * * * 3900 0 0 T 44 * 4058 * * * * * 1818 * * 4636 3890 * * * * 1760 1980 * * 44 0 * * * * * * 3900 0 0 V 45 4113 4058 * * * * * 1577 * 4328 * * * * * * 3884 1219 * * 45 0 * * * * * * 3900 0 0 F 46 * * * * 322 * * * * * * * * * * * * * * 2322 46 0 * * * * * * 3900 0 0 S 47 4817 * 3519 * * 4328 * * * * * * * * * 344 4654 * * * 47 0 * * * * * * 3900 0 0 H 48 * * * * * * 752 * 3204 * 4186 4636 * 3890 2887 * * * * * 48 0 * * * * * * 3900 0 0 A 49 800 * * 3890 * * * * * * * * 3483 * * 1895 * * * * 49 0 * * * * * * 3900 0 0 Q 50 2638 * * * * * 3226 * 4186 * * 3363 * 1740 * 2564 5113 3590 * * 50 0 * * * * * * 3900 0 0 T 51 * * * * 3590 * * * * * 5142 4328 * * 4665 2298 893 4113 * * 51 0 * * * * * * 3900 0 0 V 52 3755 * 5241 4654 * * * * 3764 * * 4058 3363 3557 * * 2791 1811 3590 4991 52 0 * * * * * * 3900 0 0 V 53 * * * * * * * 2407 3590 * * * * * * * * 457 * * 53 0 * * * * * * 3900 0 0 L 54 4457 * * * 3363 * * 4065 3126 2438 * 3255 * 4991 4239 4058 2861 3163 * * 54 0 * * * * * * 3900 0 0 C 55 * 110 * * * * * * * * * * * * * * * * * 3763 55 0 * * * * * * 3505 0 0 V 56 4289 * 3763 5344 * 5282 * 3781 3217 3057 * 3303 3119 3851 4138 * 5516 2643 * * 56 0 * * * * * * 3505 0 0 G 57 * * 3740 * 4138 1753 * 3211 4502 * * 2908 * * * 3463 * 2353 * * 57 0 * * * * * * 3505 0 0 C 58 * 0 * * * * * * * * * * * * * * * * * * 58 0 * * * * * * 3505 0 0 S 59 4218 * * * * 1005 * * * * * 3646 * 3653 * 2221 3754 * * * 59 0 * * * * * * 3505 0 0 T 60 4026 * 3919 4696 * * * * 3781 4218 * 3025 * 4502 3648 3320 1472 * * * 60 0 * * * * * * 3505 0 0 V 61 3920 * 5357 * * * * 3137 * 2925 * 4218 3352 4352 * * 2227 2000 * * 61 0 * * * * * * 3505 0 0 L 62 * * * * 3763 * * 1960 * 579 * * * * * * * * * * 62 0 * * * * * * 3505 0 0 C 63 1391 1808 * * * 4502 * * * 3919 * * * * * 4352 3740 3337 * * 63 0 * * * * * * 3505 0 0 Q 64 * * * 2256 * * * 4352 3126 * * * * 1845 3740 * 2184 * * 4218 64 0 * * * * * * 3505 0 0 P 65 3920 * * * * * * * * * * * 274 * * 3227 * * * * 65 0 * * * * * * 3505 0 0 T 66 4138 * * * * * * * * * * * * * 4618 2827 393 * * * 66 0 * * * * * * 3505 0 0 G 67 * * * * * 63 * * * * * * * * 4549 * * * * * 67 0 * * * * * * 3443 0 0 G 68 * * * * * 98 * * * * * * * * * 3933 * * * * 68 0 * * * * * * 3443 0 0 K 69 * * * 4146 * * * * 302 * * * * * 2915 * * * * * 69 0 * * * * * * 3424 0 0 A 70 596 4050 * * 3590 4599 * 4039 * 4308 * * * * * 4552 * * * * 70 0 * * * * * * 3424 0 0 R 71 4050 * 4063 * * * * * 1076 4039 * 4955 * * 2873 * * 2507 * * 71 0 * * * * * * 3424 0 0 L 72 * * * * 3405 * * 2018 * 994 * * * * * 3590 * 3767 * * 72 0 * * * * * * 3424 0 0 T 73 2813 * * * * * * 3783 3639 * * 3299 * * * 1916 1565 * * * 73 0 * * * * * * 3189 0 0 E 74 3549 * 3550 1925 * 3201 * * 2435 * * * 2999 3851 * 3685 * * * * 74 0 * * * * * * 3141 0 0 G 75 * * * * * 1555 * * 3201 * * 2999 * 1654 * 3212 * * * * 75 0 * * * * * * 3141 0 0 C 76 * 858 * * * * * * * * 3196 * * * * * 4239 1805 * * 76 0 * * * * * * 2896 0 0 S 77 * * * 1608 * * * * 2572 * * * * 3196 * 1341 * * * * 77 0 * * * * * * 2896 0 0 F 78 * * * * 585 * * 2095 * * * * * * 3332 * * * * * 78 0 * * * * * * 2671 0 0 R 79 * * * * * * * * 2737 * * * * * 882 3496 * 3066 * 3332 79 0 * * * * * * 2671 0 0 R 80 * * * * * * * 3525 1334 * * * 3124 * 1316 * * * * * 80 0 * * * * * * 2671 0 0 K 81 * * * * * * * * 864 * * * * 2905 1658 * * * * * 81 0 * * * * * * 2322 0 0 Q 82 * * * * * * * * 843 * * * * 1177 * * * * * * 82 0 * * 0 * * * 1764 0 0 //