HHsearch 1.5 NAME c9nh5G_ FAM FILE c9nh5G_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9nh5G_.a3m DATE Sat Jan 24 13:03:08 2026 LENG 105 match states, 105 columns in multiple alignment FILT 130 out of 227 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.0 EVD 0.4667 1.1040 SEQ >ss_pred CCCCHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCEEEEEEEEEEEEEEEEEEEEEECEEEEEEECCCEEEEECCEEEECCCCEE EEEEC >ss_conf 9320357762026631542012202585789999985797099999269758899999999971032059734299996077404867466998558299 99859 >Consensus pxxxxxxxxxxxxxxxxxtxxxxxxxxPlxxlxxxxxxxxrVxVxlrxxxxirGxxxGxLxaFDxhmNLVLxDxxExxxxxxxxxxrxlgxixiRGdnVi xIxxa >c9nh5G_ PERIQRLRRLMKAPRNVLTRMPLHEGSPLGELHRCIREGVKVNVHIRTFKGLRGVCTGFLVAFDKFWNMALTDVDETYRKPQQVFTRHINQIFIRGENVL LVHLA >UniRef50_A0RYZ2(15-102:106) Small nuclear ribonucleoprotein n=1 Tax=Cenarchaeum symbiosum RepID=A0RYZ2_CENSY E=7e-05 s/c=0.55 id=24% cov=69% ------------------------AKRPLTALQK--STKKAVTVRLKNETEYKGKMENV----DSYMNLIMTDAEEFHDSKVVA---NYGRVIVRGNNVL FIRL- >UniRef50_D1IU23(58-165:170) Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) n=10 Tax=Eukaryota RepID=D1IU23_VITVI E=7e-17 s/c=0.82 id=28% cov=93% -ENDPKLRLQMEDDATAKNEGEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRV----RAFDRHCNMVLENVREMWTEVPKtgkgkkkanpvNKDRFI SKMFLRGDSVIIV--- >UniRef50_A8BLX8(28-120:124) Small nuclear ribonucleoprotein Sm D2, putative n=2 Tax=Giardia intestinalis RepID=A8BLX8_GIALA E=2e-15 s/c=0.90 id=25% cov=79% ----------------VTTMSNKISDSPYAFFDEVLALRKPVLVQLRSGRFI----TGVLKAYDRHLNLVFSEATETWEENGIEYTEERKNFMLRGDNVI MV--- >UniRef50_A8PYV0(81-210:220) Sm protein n=1 Tax=Brugia malayi RepID=A8PYV0_BRUMA E=2e-13 s/c=0.59 id=25% cov=95% ------LRRSLNKKWSAVNLFQTNQQGPMKRLEECMEQGHPVRISLRGRNSVNSSIQAKIIAFDKHWNLLIRDGDESFNPPMNMKrrttksihavgpyqy sesqcedregktktlwQRHLPCSLIRGDDIVLISVS >UniRef50_Q6CRN4(1-69:73) KLLA0D07678p n=3 Tax=Eukaryota RepID=Q6CRN4_KLULA E=0.0004 s/c=0.67 id=21% cov=41% ---------------------------------------------------------GILRGYDAFLNLVLDNPIQIFEEGEVQMG---PQTVVRGNSIV SI--- >UniRef50_Q4MZX3(7-88:91) Small nuclear ribonucleoprotein, putative n=11 Tax=Eukaryota RepID=Q4MZX3_THEPA E=4e-15 s/c=1.01 id=18% cov=79% -------------------KLQKIMTQPINQIFRFFTGGTRVQIWLFDQP--NTKIEGTIRGFDEYMNMVLDNATEV--HVKKNVKKDVGRILLKGDCMT LISAA >UniRef50_Q8SRU9(20-79:102) U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN (Sm-LIKE PROTEIN) n=1 Tax=Encephalitozoon cuniculi RepID=Q8SRU9_ENCCU E=6e-08 s/c=0.98 id=29% cov=47% ---------------------------------------------------------GVMKSFDQFNSVTLDGVIERIFHDTRYAERRHELFIIRGENIT MIGLS >UniRef50_C4Q3X2(555-650:664) Family S9 non-peptidase homologue (S09 family) n=7 Tax=Eukaryota RepID=C4Q3X2_SCHMA E=2e-07 s/c=0.59 id=28% cov=78% ---------------TFLARMPTGDKQPekhkkesIIDLNKYID--KRIRVKFSGGREAVGILKGC----DNLQNMVIDCTTEFLRDPDDphrltEDTRE LALVVCRGPSVELV--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 2421 0 0 E 2 * * * 517 * * 1731 * * * * * * * * * * * * * 2 0 * * * * * * 2782 0 0 R 3 * * * * * * * * * 3308 * 2638 * 846 2458 * * * * * 3 0 * * * * * * 2931 0 0 I 4 * * 2815 * * * * 1981 * 3148 1573 * * * * * * 2683 * * 4 0 * * * * * * 3247 0 0 Q 5 * * 3417 2388 * * * * * * * * 1065 3618 * 2683 * * * * 5 0 * * * * * * 3247 0 0 R 6 * * * * * * * * 1521 1932 3564 * * * 2646 * 2785 * * * 6 0 * * * * * * 3247 0 0 L 7 3480 * * * * * * * * 1036 * * 3650 * * * 2551 2537 * * 7 0 * * * * * * 3777 0 0 R 8 3480 * * 3889 * 3650 2894 * 4149 * * * * 3164 1752 2609 * * * * 8 0 * * * * * * 3777 0 0 R 9 * * * 3729 * * * * 2989 3603 * * * 4536 869 4708 3517 * * * 9 0 * * * * * * 4019 0 0 L 10 * * * * * * * * * 2306 3970 * * 2791 2275 2609 3529 2917 * * 10 0 * * * * * * 4019 0 0 M 11 3729 * * * 3531 * * 4290 2801 3148 2562 4444 3529 * 4007 * 2586 * * * 11 64 4536 * 3907 100 * * 4019 1000 0 K 12 * * * 2882 * * * * 1106 * * 3223 * * 1773 * * * * * 12 0 * * * * * * 4050 0 0 A 13 3607 * 3698 * 4322 * 2082 * 1915 * * * * 3876 2619 * 4092 * * * 13 65 4497 * 0 * * * 4050 1000 0 P 14 3876 * 3698 * * 4087 3705 * 3223 * * * 2181 3407 2014 * 4327 * * * 14 0 * * * * * * 4050 0 0 R 15 3698 * * * * * * * 2200 * * * 3135 * 1319 * 3581 * 3223 * 15 87 4092 * 2322 322 * * 4050 1000 0 N 16 * * 4347 3872 * * * * * * 4421 1188 * * * 3453 1987 4223 * * 16 0 * * * * * * 4231 0 0 V 17 2324 * * * 3166 * * 1522 * 4378 * * * * * * * 1773 * * 17 141 * 3429 * * * * 4354 0 0 L 18 * * 4271 * 2408 * * * 4009 1326 * * * * * * 3092 3402 4510 4546 18 0 * * * * * 0 4201 0 1130 T 19 2041 * * 4717 * * * 4751 * * * 2947 * * * 3492 1110 * * * 19 0 * * * * 0 * 4433 0 1130 R 20 * * 4871 3514 4960 * * 4883 2586 3964 3751 4860 * * 1651 4766 4518 * * 3753 20 0 * * * * * * 4725 0 0 M 21 3882 * * 4871 2843 4558 * 4932 * 2838 1274 * * * * 3741 5142 5216 * * 21 0 * * * * * * 4725 0 0 P 22 * * 3921 2392 * * 4518 * 3902 * * 4631 2465 2243 * 3131 3537 * * * 22 133 * 3509 * * * * 4725 0 0 L 23 4911 * * 3379 * * 4685 * 1564 4073 * 4461 * 4357 3307 * 2065 * * * 23 176 * 3121 * * 524 1714 4631 0 1839 H 24 3087 * * 4632 4372 3394 4036 1850 * 3460 * 3199 * * * * 3584 4786 * 4618 24 38 5275 * 1000 1000 422 1980 4518 1000 2106 E 25 3101 * 4276 3366 4063 5486 * * * * 2153 * * 3317 3322 2296 * 5397 * * 25 96 4875 5033 1585 585 * 0 4838 1000 1000 G 26 * * 4036 3510 * 2651 * 4816 2295 * * * * 3543 4337 3303 2519 4579 * * 26 29 * 5646 * * 789 1247 4714 0 1405 S 27 3885 * * 4193 * 1046 * 4788 * 4843 * * * 2736 4494 2967 * * * * 27 27 5768 * 1000 1000 0 * 4747 1000 1534 P 28 * * * * * * * * * * * * 0 * * * * * * * 28 45 5014 * 2807 222 * * 4958 1000 0 L 29 5654 * * * 3241 * * 2288 * 1258 3108 * * * * * 5485 3907 * 4426 29 0 * * * * * * 4958 0 0 G 30 2866 * 5242 4154 * 2660 * 5024 4256 5623 5550 2799 * * 4389 1857 5067 * * * 30 20 * 6158 * * * * 4982 0 0 E 31 5050 * 3814 4469 3662 * 5479 4834 * 1800 4336 * 5422 3936 4137 5473 * 2235 * * 31 0 * * * * * 0 4984 0 1000 L 32 * * * * 5436 * * 1897 * 897 4930 * * * * * 4483 3416 * * 32 0 * * * * * 0 5021 0 1000 H 33 4190 * 3438 4501 2986 * 3832 * 3367 * 6252 4649 5589 4412 2965 4871 3807 3385 5543 4515 33 0 * * * * * 0 5021 0 1000 R 34 4993 * 5975 3589 * * 4978 5494 1693 3930 6252 3727 * 5753 1897 4473 5640 * * * 34 43 * 5082 * * * 0 5021 0 1000 C 35 2035 2274 * * 3266 * 5910 4917 * 4338 * * * * * 4301 3644 5419 4703 2703 35 67 5222 5773 0 * * 0 4964 1000 1515 I 36 5772 5473 * * 3208 * * 3307 4736 2163 2080 * * * 4849 * 5591 2686 * 4586 36 125 4417 4777 2949 200 1496 632 4954 1817 1924 R 37 3978 * 3733 2256 * * * 4878 3813 4936 4712 3520 * 3121 4036 4469 3825 5037 * 3902 37 97 6137 4292 3000 193 842 1177 4984 1000 2027 E 38 4610 * 3369 1686 * 4990 4187 * 4111 4420 * 2467 * 4166 5913 3976 4510 * * * 38 72 5740 5075 1585 585 1071 932 4894 1000 2152 G 39 * * 4726 * * 2318 5764 * 2100 5288 5919 3239 * 3814 1852 * 6177 * * * 39 0 * * * * 872 1140 5189 0 2052 V 40 4038 5868 * 4890 5219 * 4561 4005 1847 * 5224 5903 * 3292 4370 3118 2813 5180 * * 40 0 * * * * 0 * 5100 0 1189 K 41 5267 * * * * * * * 3979 * 5891 4384 3346 3515 677 6098 * 5630 * * 41 0 * * * * * * 4848 0 0 V 42 5620 5784 * * 5441 * * 1856 * 3977 * * * * * * * 740 * * 42 0 * * * * * * 4848 0 0 N 43 * 5974 5994 4975 3667 5861 4218 * 2881 2950 4663 6528 * 3384 2076 4214 5267 6012 6028 5168 43 23 * 5963 * * * * 4848 0 0 V 44 * 5960 * * * * * 1959 * 3936 * * * * * * * 596 * * 44 0 * * * * * 0 5011 0 1000 H 45 4888 * * 5160 5736 * 4271 5987 2733 6394 3834 4795 * 3829 3573 3759 5641 3199 2573 4101 45 0 * * * * * 0 5011 0 1000 I 46 * 4840 * * 5193 * * 2278 * 1230 4312 * * * * 5909 2568 3841 * * 46 0 * * * * * 0 5004 0 1000 R 47 * * * * 4324 5543 4602 * 3174 6311 6111 5008 * * 851 3951 6264 5909 * 3839 47 0 * * * * * 0 5004 0 1000 T 48 * * 2970 3648 5909 2163 3714 * 3954 * * 3089 * * 5227 2449 3895 * * 5849 48 0 * * * * 0 * 5004 0 1000 F 49 3678 * 3836 3976 4188 2512 4924 * 4211 4739 * 2505 5991 4040 3751 6638 4740 4520 * 5988 49 17 * 6453 * * * * 5024 0 0 K 50 * 5740 4457 * * 6367 4631 4673 2405 5650 5436 3242 4544 * 1837 4596 3390 4412 * * 50 55 * 4746 * * * 0 5023 0 1000 G 51 6071 4868 3934 2532 6025 2255 * * 2567 4705 * 6480 * * 4070 2653 5471 6309 * 5991 51 79 * 4233 * * 1990 418 5069 0 2041 L 52 5171 * * * 6505 5771 5676 1945 * 1934 4483 * 5748 * * * 5846 2004 * 3797 52 101 * 3881 * * 1430 669 5011 0 2888 R 53 * * 4819 6165 * 4723 5666 3824 4601 3788 * 4007 * 6134 955 * 5906 3986 * 4759 53 217 * 2841 * * 2709 239 4993 0 2935 G 54 5595 * * 5541 * 351 * * * * * * * * 3982 4003 4385 * * * 54 35 * 5377 * * 2950 200 4843 0 3490 V 55 * * * * 5863 * 2845 3231 3948 * * 5803 * * 2574 3093 3038 2181 * 5207 55 171 * 3164 * * 706 1370 4888 0 3503 C 56 4353 3237 * * 3970 * * 2260 * 1654 3788 * * * * * * 2456 * * 56 81 * 4202 * * 1722 521 4868 0 3521 T 57 * 6443 6439 1752 6152 * * 6940 4399 6067 * * * 2980 3915 3141 2207 3788 * * 57 23 * 6012 * * 2355 314 5551 0 3113 G 58 3651 * * * * 154 * * * * * 5532 * * * * * * * * 58 94 * 3985 * * 3303 154 6054 0 2983 F 59 * 5703 * 5702 3574 * 6369 3341 2877 5113 * 5065 * 4342 5445 * 2800 2390 * 2597 59 72 * 4358 * * 1346 721 6022 0 3320 L 60 * * * * 5358 * * 2643 * 625 3960 * 6559 * * * * 3440 * * 60 0 * * * * 2547 271 5963 0 3760 V 61 4354 * * 4638 * * 4522 2876 2522 3185 6188 * * 4891 2522 5954 4465 2700 * 6608 61 0 * * * * 3088 181 5995 0 3543 A 62 1252 5958 * 5932 5489 2160 * 6032 * 6731 * 5499 * * * 2457 4210 5745 * * 62 0 * * * * 864 1150 6008 0 3407 F 63 * * * * 708 * * 4109 * 4977 * * * * * * 6212 5523 5901 2023 63 0 * * * * 0 * 6060 0 2435 D 64 * * 0 * * * * * * * * * * * * * * * * * 64 0 * * * * * * 6108 0 0 K 65 5564 * 5107 2447 * 4070 * 6502 2096 7130 * 3946 5096 2270 3764 4647 5851 5472 * * 65 0 * * * * * * 6108 0 0 F 66 * 6137 * * 2105 * 1258 * 6389 4616 6735 * * 5366 * 6833 6242 5767 * 2262 66 0 * * * * * * 6108 0 0 W 67 5589 4413 * * 4002 5210 * 6145 * 2768 1284 5191 6794 5593 * 4531 6740 5103 3270 5123 67 0 * * * * * * 6108 0 0 N 68 * * * * * * * * * * * 40 * * * 5196 * * * * 68 0 * * * * * * 6105 0 0 M 69 * * * * 6117 * * 2995 * 1025 2216 * * * * * * 2704 * * 69 0 * * * * * * 6105 0 0 A 70 3616 * * * * * 6648 2170 * 3516 5971 * * 5903 6462 * 4452 974 * * 70 0 * * * * * * 6105 0 0 L 71 * * * * 6168 * * 4111 * 227 4014 * * * * * * 6413 * * 71 0 * * * * * * 6105 0 0 T 72 5962 * 1860 2445 * 4314 5337 6534 4623 5199 * 7077 * 4232 3656 2712 4406 4994 * * 72 0 * * * * * * 6105 0 0 D 73 * 6345 870 3154 * 4655 6528 * 5203 * * 2380 * 4894 7164 5816 * * * * 73 0 * * * * * * 6105 0 0 V 74 1749 3345 * * * 5048 * * * 7382 * * 6110 * * 4306 2742 1500 * * 74 0 * * * * * * 6105 0 0 D 75 5219 6802 3742 1971 5641 * 6755 3068 3513 6615 * 6232 * * 4430 6044 2626 3124 * 4780 75 8 7429 * 3322 152 * * 6105 1000 0 E 76 * * 5480 111 * * * * * * * * * 4269 * * * * * * 76 119 4430 4926 3128 175 * * 6105 2158 0 T 77 4976 * 6588 5755 4268 * 5820 3029 5736 4085 4947 7082 * 7210 3610 4305 2431 2419 4474 3774 77 185 4550 3692 2278 333 * 0 5600 2742 2331 Y 78 5223 * 3658 6454 3366 7103 4397 2808 6806 4733 5507 * 5775 * 4551 3508 4735 4789 3239 2388 78 164 4117 4324 3667 118 * 0 5408 2740 3405 R 79 5215 7670 5637 3131 4341 5036 5087 5672 4002 6940 5477 3871 4374 5271 3172 3277 2863 4349 * 3857 79 68 6004 5023 4720 56 881 1129 5392 1434 3717 K 80 5074 * 3673 2607 * 5051 4564 6036 2445 5991 6263 6318 3899 4913 3655 3750 3571 3696 * * 80 52 5543 6174 2743 233 1217 811 5388 1826 3268 P 81 4487 * 3567 3940 * 3508 * 5440 2833 4851 6123 3361 2505 * 3642 5137 3861 4192 * * 81 73 4793 6246 4923 48 899 1108 5463 2415 2994 Q 82 5880 * 2943 3279 * 3012 5748 6160 3061 4391 4522 3019 5679 3977 5411 3973 4313 4699 * * 82 87 4462 6268 3520 132 958 1043 5489 1995 2380 Q 83 4769 5011 4767 2984 * 2826 6695 5008 2896 5505 5354 3180 5455 3449 4933 4580 5831 4140 * 4915 83 134 3788 5916 3867 102 1406 684 5491 2890 2292 V 84 5055 * 5490 2808 5089 5596 5999 4015 4079 6908 5043 3179 3877 5066 4192 4033 4422 2871 * 3794 84 136 3840 5655 4588 61 1236 797 5493 2890 2192 F 85 4034 4188 5151 3182 4289 6342 6666 3558 2204 4306 5675 * * 7160 4060 5228 3461 3275 * 6318 85 111 4355 5319 4700 57 1444 661 5490 2355 2159 T 86 5541 * 3870 2703 * 5449 5578 5236 2350 5260 6249 6681 5851 4465 2734 4592 2638 5263 * * 86 100 * 3894 * * 2234 345 5474 0 2471 R 87 4967 * * 4206 * 5703 * 4680 2951 5326 * 4314 * 4994 849 * 5608 4512 * * 87 7 * 7705 * * 1649 554 5423 0 3396 H 88 5686 7127 4532 2966 4138 6829 3199 * 3404 5314 * 3765 3691 4747 3222 4236 3934 5396 * 3827 88 43 * 5082 * * 869 1144 5487 0 3028 I 89 7677 7037 * * 5805 7129 4426 2126 * 1495 4429 6881 * 6183 5254 6829 5644 3003 * 3577 89 14 6676 * 0 * 0 * 5444 1000 2591 N 90 5248 * 4511 4027 * 887 * * 3558 * * 4814 2812 6822 5265 5066 * * * * 90 0 * * * * * * 5481 0 0 Q 91 6545 5305 4263 5373 5795 * * 6260 3141 2488 3346 5125 * 2741 3037 4823 3669 4485 * 6947 91 13 6808 * 0 * * * 5481 1000 0 I 92 5825 6287 * * 3989 * * 1966 * 2363 3204 6709 6522 * * 5775 6167 1979 * 4593 92 0 * * * * * * 5485 0 0 F 93 * * * * 1707 * 5699 3325 * 1760 3737 * * * * * * 2424 * 5795 93 0 * * * * * * 5504 0 0 I 94 5092 5870 * * 6534 * * 1572 * 1587 5864 * * * * * * 1963 * * 94 0 * * * * * * 5504 0 0 R 95 * * * * * * * * 3257 * * 5072 * * 263 6267 * 5699 * * 95 0 * * * * * * 5504 0 0 G 96 * 3945 * * * 119 * * * * * * * * * 6125 * * * * 96 0 * * * * * * 5504 0 0 E 97 * 5874 1224 2254 * 5803 * * * 5946 * 2445 5310 * * 4675 3988 * * * 97 0 * * * * * * 5375 0 0 N 98 5373 5465 5554 7346 * 5199 6797 * * 5946 5579 1064 * 3385 6483 2427 3889 * * 6178 98 0 * * * * * * 5375 0 0 V 99 * * * * * * * 1313 * 5362 5455 * * * * * * 862 * * 99 0 * * * * * * 5375 0 0 L 100 4591 * * 5758 6493 5450 6060 2201 5906 2290 5700 * * * * 4754 2996 1885 * * 100 0 * * * * * * 5371 0 0 L 101 5741 6396 * * 3363 * 6224 3672 * 1382 3438 * * * 7281 3277 3778 4697 * 3582 101 0 * * * * * * 5373 0 0 V 102 * * * * * * * 988 * 3189 5897 * * * * * * 1437 * * 102 0 * * * * * * 5352 0 0 H 103 4555 * 4941 5427 * 4263 3638 * 5217 5382 * * * 2837 5155 1338 3804 * * 3588 103 0 * * * * * * 4767 0 0 L 104 3893 * * 3653 * * * 2736 * 1588 4772 * 3123 * 3955 5198 * 2973 * * 104 0 * * * * * * 4655 0 0 A 105 371 * * * * * * * * * * * * * * 2142 * * * * 105 0 * * 0 * * * 4105 0 0 //