HHsearch 1.5 NAME c9n5kA_ FAM FILE c9n5kA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9n5kA_.a3m DATE Sat Oct 18 10:59:12 2025 LENG 1075 match states, 1075 columns in multiple alignment FILT 37 out of 39 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.0 EVD 0.4049 -4.9958 SEQ >ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCHHHEEEEEECCCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCEECCHHHHHHHHHHHCCCEE ECCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCEEEEEEC CCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC CCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCE ECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEC CCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCHH CCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCEECCCCCCCCCCCCCHHCCC CCCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCEEEEEEECCCCCCHHHCCCEEEEEEECCCEEEEEEEEEECCEEEEEECHHHCCCCEEEEECCCCE EEEECCCCCCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCC CCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHCC CCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEEEEECHHCCCCHHHCCCC >ss_conf 9642123876862244683213458746999854161301789815568874010012223100354422797367785100000123664753123114 1443466754321168999834421155189998531025655445469999960777874440002677650354053447724888943880899877 8765437421200246520002456544540001366641010325676532123344431000344411111256432234456443222111122077 6566518999996068764101011244654221211000010001443200000001222001231024554310212234444334443222356420 0146507997003544223474344555531687507773069997488898643222223343343450358740320213457666635665301210 4654332012356641124431000157652344210024432211056302320232210011025677777621478746544777038998275100 3434455614899999703676797244034555555446666663266402124777764057884198299997589705641102000122000022 3310231002442113220004512204666653204899943776401111330388972785147888654111014760164345410000025741 5552122211222677653169995643382899823443455520131676542000104667542111247704541224522242499996122255 6127899558655444454432340799999932788747601015787631477874057871279996225731888874988016125568785324 431256788777420232356412677403677213345316999984667605899999211314421420359 >Consensus xxxxxxxxxxxxCxfxxxxxxtxxxxxxxxCxvxxxpxxxvxixcPxxxxxxxxxxxxxxxxkxxxxxxxxxxxxxxxxxxxxxxxxxxxxixxxlxGvx xxxxxxxxxnxxxxxxxxFxlppxxxxxxxxxvcxxxxxxxxxxxxgxxxixirxxxxgxxvkgCxFxxxxxxxxxxxxxixxxxCxixxxxxdvxGxxC pxxxxxxPxxCFxxxxxxxxxxxlxxxxxxxxxxxxxxxxnixxxxxxxxixxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxnxkxxxxxxyxxiP xxxxxxxnxxCsxxxxxxxvxxxxxxxxxxxxxxnxxxxexxxxxxxxxxxxkxxxlxxxxxxxxxixxxxxxxxxxxxxxxxxxxxxxxxxxnxxxxxx xxxxneyiCDFtkxxxlxxxxpxxxxxxxxxxCxxxxkpfDxvtvkCPxxxnxxxxxxxxxxxxxxxxexxkixidxxxyxsxxxxxtxxxxxkxxxxxx fxxxxxxexxxxxkxxxxxxxixxxxxxxxxlxxvxxxxxxxklxxxlxxxxxxxxkxxxxxxxxxxxxxxxxtxxxtfxxPPxixxxxxfxxxcxnsxt kxxnkxxgxxGIvkIxVsknxxkIkGCDFxxxxxxxxxxxxxxxxxxfxxxxxxxxxxxxxxCxixxxxxxiiGixCxxxxxxPxxCfxxvxxxxxxxxx xxxxxxnxxxxxxxxxixxilxxaxxxxxxxxxxxxxxxlklpxxxxxxxxxxxkxfxcxCxxkxixkxxixxxxxxxxxxxxxxxxxxxxxxxxxxxxv xxxxxxxxixxxixkxxxtxxyxxxixxfxxxxixxpxxxxxxxenixixxxxxxxkxlxxxxxxxxlxxIlpGsixxxkxxxkxxxxxxxlxxpxyVxx xxxxxlxcxNsxxxxkxxxxxxxggixxixIxvxxtdxkiyGCdFxxxxxxxFxxsxxxxxxkxxxCxIdxxxNsxiGFxCPxxfxlePxnCFxsvxxxx xxxklxxlxxlxxxxxxxxixxxxxxxxxsyixxxxxxkxxxfxCxCvxxxxxxxixitxxxxxxxxxxxxxxxx >c9n5kA_ TAQGIKHNNVHLCNFFDNPELTFDNNKIVLCKIDAELFSEVIIQLPIFGTKNVEEGVQNEEYKKFSLKPSLVFDDNNNDIKVIGKEKNEVSISLALKGVY GNRIFTFDKNGKKGEGISFFIPPIKQDTDLKFIINETIDNSNIKQRGLIYIFVRKNVSENSFKLCDFTTGSTSLMELNSQVKEKKCTVKIKKGDIFGLKC PKGFAIFPQACFSNVLLEYYKSDYEDSEHINYYIHKDKKYNLKPKDVIELMDENFRELQNIQQYTGISNITDVLHFKNFNLGNLPLNFKNHYSTAYAKVP DTFNSIINFSCNCYNPEKHVYGTMQVESDNRNFDNIKKNENVIKNFLLPNIEKYALLLDDEERQKKIKQQQEEEQQEQILKDQDDRLSRHDDYNKNHTYI LYDSNEHICDYEKNESLISTLPNDTKKIQKSICKINAKALDVVTIKCPHTKNFTPKDYFPNSSLITNDKKIVITFDKKNFVTYIDPTKKTFSLKDIYIQS FYGVSLDHLNQIKKIHEEWDDVHLFYPPHNVLHNVVLNNHIVNLSSALEGVLFMKSKVTGDETATKKNTTLPTDGVSSILIPPYVKEDITFHLFCGKSTT KKPNKKNTSLALIHIHISSNRNIIHGCDFLYLENQTNDAISNNNNNSYSIFTHNKNTENNLICDISLIPKTVIGIKCPNKKLNPQTCFDEVYYVKQEDVP SKTITADKYNTFSKDKIGNILKNAISINNPDEKDNTYTYLILPEKFEEELIDTKKVLACTCDNKYIIHMKIEKSTMDKIKIDEKKTIGKDICKYDVTTKV ATCEIIDTIDSSVLKEHHTVHYSITLSRWDKLIIKYPTNEKTHFENFFVNPFNLKDKVLYNYNKPINIEHILPGAITTDIYDTRTKIKQYILRIPPYVHK DIHFSLEFNNSLSLTKQNQNIIYGNVAKIFIHINQGYKEIHGCDFTGKYSHLFTYSKKPLPNDDDICNVTIGNNTFSGFACLSHFELKPNNCFSSVYDYN EANKVKKLFDLSTKVELDHIKQNTSGYTLSYIIFNKESTKLKFSCTCSSNYSNYTIRITFDPNYIIPEPQSRAII >UniRef50_Q7RHX7(1050-1609:1609) Transmission-blocking target antigen s230 (Fragment) n=7 Tax=Plasmodium (Vinckeia) RepID=Q7RHX7_PLAYO E=9e-72 s/c=0.49 id=19% cov=45% ---------------------------------------------------------------------------------------------------- ------------------FFPYYIKENYEINVVCDNTNTKYENKQGGKYIYNIKIPKRGKKVKGCNFNSNKKSEMFENGEIikideNTNTCKIDVKPKDV IAFECPPET-IKITNCFKDAIIDNKLTNLSTvlqlNNNISSWTYGHKTSYIEIPAVIDIdatlicICVGLKKIYDIKSvfspkflneiYKKLGIVNDIYT KPILSHKSIKYNSKLFEKYKENKIGNFFDFIKNTKISEPDSDPQiVIENLFIEHFDKYTSTIKQDEYYLDKYaLLNGFDVWENTYDNVLEETIIKDIESF EKNNFKIY----TLEVNLKSSKLIKPIKLTDNKYVCDFSKNNLIVPENE-IGNIPQDVNCYTILSPLDTLYVKCPTVKSKYPEAEREIEDEDDEYEKEII ElidrLDVPETESDVETDPNVLLDKETYTKYFNKLTLKPKSFFNSVTN------------------YLYNVEEKTETVLKGAIFTEMKVL--------KK SNPYISYASIIIPPYIESNEILKVECDNTGYKEGGNIAGYNGIAYIDLSKHKSKIKGCDFTQHE------------------------------------ ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ------ >UniRef50_A5KBP2(653-1744:2215) Sexual stage antigen s48/45 domain containing protein n=2 Tax=root RepID=A5KBP2_PLAVI E=1e-146 s/c=0.48 id=22% cov=85% --------RTHLCDFMGNnpaLKPTRKKPVNYICDVFPKPMEYIALNCPTnlideqnekilsdllyqYGTPGIKEQIRAFGKKRNNYSKSFHLPKAAPAF VINRYMQNVKTIDEMIPGVLVqdtvrikiarikktdagvedpslPPDESDEinqmyaahlglPNSIHRGLFIFQLPPfIKRNAVIEFACinDKTKKMGNT GNNGIMSVHLR--MEGSEVHGCHFykGKEENSILKKKIKVGSGQECSVQSNGEIeyIGIICPvqNGLYLTPPGCFQTA--------YDSSDALVQLSSYD GDFK---------------------------------------------NFSNDKGVSYLKIPQSFVGHLSIFCYCNEEAPPLVEGVAASLGAPKKENLM NVELNTSNRGITNLQKIDHLF------------------------EADFLIGNEFTNRRPTPILRK--KHICDFTREDS--SLAPRDELPGINSCFVDLE ENLSLVEVRCPRNANSPGASRFSTVRGMHSVGSVARTaVGGARYGNHGG-----------FLSDDHLLTEEELSKYK---------HIKYVPEE-LEDVV HLNSKKKLQDILPGTIILDGSKKFGE-----------KGRFTFITPLIVKNDIIIKLFCDNSETVMGKKRgKKGVVVVKIPKRVTKKRFYGCDF------ -----SGNANKTFYYSEVHSLTSDNKECHVKLKENIIVSLNCPNGKINPKNCFHNVYIRSTMDQENVESVENIFKNVKVINTNYLLKNSsafliiskmsh tkdlnfyCTCEDYDSKNVGTIFLSLPGNpaqnpSHNPASTSERKLILDVPPYYAKDTYVCDFTEQHYTVVKRSQVDvekllnrylqnilsyqhdeftHFS LNFKLRKEVMKKQYIEYVKRQIQHyrenppmvesyPDHTLVYKCNIdlSAFDKVAIKCPPRQAAGGGSGLPPSKGTQpsgaPRLMYTSSLGNDpsslvkg LNSLLFGTIIVNKTNEKnvsfFEKGEIELIISPYADSSKNLSFSCEN-MGEDGANRVIGYTS-----IFVKKNSNKILGCDFidpsdvgtsqvnpptggg tTPHRNNSFEFEIELVEGKNIYCNIEAIENDVVGFSCPHNFLTAPENCFESVQIEGVDKELEthKLEKLLKGVHILKNKIYDVNYTPSYVILPkKITKSM KIFCTCNS-------------------------- >UniRef50_O96175(590-1571:2508) Transmission-blocking target antigen s230 paralog n=1 Tax=Plasmodium falciparum 3D7 RepID=O96175_PLAF7 E=5e-91 s/c=0.35 id=22% cov=80% ---------------------------------------------------------------------------------------------------- ------------------FFLTSYINHGPFPLIIECVISNSNKDYQNVyILLHLRTSIKNRSVSFCDFEKVQG-YNYLNNYIDGKICNINITSNSVFGFR CPSNSIKEPKDCFSQVYIDKKVYKLNDKLSNKLILYSMKQENLAIAGFNNYISNSFSFecycIDKNQTYSSYERTSGedifnhivkriHVHYKNYDeLYD YNIHDKITYEPIMKNPPITYlcdflnkkqilqplnNKTKNYICTIWYPKPLNYIALNCPTNRRDEQNDQTISEV-----------YNSLQKDLLKPTGIE QQIDQKKKElNLLFNKRNIYSNLYHLPKNAPKRTINKNGL-----NIVNIDEIIPGILIKD-----VINMKLEDVIKPDLLTPTSFLHKTyNTNKSYLFS TRNKSTSVFNTPSIYTPLTHTSFSISPKSVPLTK---------SRIEETHSSSNTYEQYIGKRNSIEN-------------------------------- --------GFFIFQLPPYLKKNQTIEFACINDSTIK-NKNVGNNGIMTIHLKSFGNPIEGCYFYK-----NSAKYNYLKKSIKIDDLKKE-----ECTIr SDGEIEFVGIMCPyenNLYLTPSSCFLKTYDNTDNLVELLDINENfeyysndkgiSYLKIPQEFLNHVHLFCYCNVDKDSVSDTNVLVKKENKISLELNY SNKGFNIIKTIDYQYEADILIGYSYYFKRVTPIYRKKHICDFTTEDNslepesedkmiyscyLSLENNLNFIEVKCPKNKKSSN---SEWLFKYGTFDKS SEIMEDDENIKkyehMKYMPEDKDEIIYLFKKQKLEDILPGVIIFDKNRYFFEKGNFSFVTPLIVKEDVTIKLLCDNS--ETKIDDKIGKKGIILIKIPQ HITDKKFYGCDFSGdsnKKSSFYYTSVYDLKTQNQYCEVKLKENIIISLNCPNGNINPNNCFNNVFLKTNMNeqihEKIQNIFDQVKVINTkSHVLLNSS STFL--IISKITKKELNFFCTCHHNETKNVGTIYIKNEDIINFSKA---- >UniRef50_Q8I1Y5(87-373:379) Pbs36 homologue n=6 Tax=Plasmodium (Laverania) RepID=Q8I1Y5_PLAF7 E=1e-41 s/c=0.61 id=17% cov=26% --------NYYICNLKDYANET--------CTVNYDYNKMIKLLCPI--NKSYEEYDDRYCFKFIGIRDRLVINNQEEPIM------------DTLPGII IENLNMFDR-YNVGIYMPFYV-----KEDITIVCTCESSKDSEAITPYLKIHVKAnnsfNKEGEFIKGCDYGNNKGKHQFLTNTLKQEEnflCEINANPG EVVGMNCIN---------FEEYTTTTTINNKKKKHQNKNNKNNFDVIQLRPPHCFSNVSISMSFLR-VVTMNVNNLLPEAKYYPEVYSFPKDKKFQKYST ISYLWIPENVPHDILFYCHCNFPQGKGIGLFNI------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------- >UniRef50_B3L0R4(105-660:2256) Pfs45-48 related protein, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L0R4_PLAKH E=3e-47 s/c=0.35 id=17% cov=33% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------NRVLGFKLADAELDPENCFKVVYSEEKELAL EIEYQFSR----------------CLILDRPQFKLRYFYIN--------DEYFEEEIQFSCSFTYKGKKKKVTFGEAEVSPNTDTYfIEPDKKEFQYFNG VpFKVCHFEYDEG---KKKSTQVCERTINEFSLFMYNC---ESETKKQIQLPEPVETVRYLNVTHPLKDFSDITFLSKDVHIENLRWRFPDYKYFMTSYI NHGPHpLIIEC----VIPNKTKDKFQKANILLYVKTNLKDKKVSFCDFRSSK----LYDYLNTYIKGDECEINVTSNSSFGFRCPEGTVKKPKYCFTEMY YLGYLYPLGDLF-----AQNIVIYSYKDPTLSLAAFTSSLSRSYSFECFCVKEDDQSKIEKRVIVNYIN--------- >UniRef50_Q7RHX7(265-1240:1609) Transmission-blocking target antigen s230 (Fragment) n=7 Tax=Plasmodium (Vinckeia) RepID=Q7RHX7_PLAYO E=1e-111 s/c=0.42 id=18% cov=88% -------NNDYVCDFRNHIKASESKETERVCELKiVKPIANINIICPTKDLENDEFENITYFPKR---APYVVLELTKQTEKENQTKLKEKKITDLLYGT IIPKIHNGKNNNLNRGSIRFILPPIvVKNTTFYIICDNSKSKKNSFKGKKGIVKIQVTPYGNIEKGCNYSKNKNHLFGININNYDKETKIDEIEKRKGNF PC------------------FFQLNAGEAGGIIFP------ENYKSTTCFEEVIEYN---INKKWDKKKKEINELINGAIVYKSDINY---KYFNAIYIG IPTSYRKSLHIFCNITTTDnivHMVYLSINQEINISVFD----------------------LFESLIRLNKITEVAQKVDKKK----------------- ----------EYMCDFTKR--LDAPHDNNENNKKVIICRKKLKEFDIFRLKCDFNKTKNKNISMIPSSLMENQHVLKLDLDVQFLL--LKLYMKLNSKLH KYVHEYPPFLIFPLNIISRLELKKNIIFKNHKYGKYFNESPNKDGlLVNLLTYLNSLDVLPMNTGIESINLDVNDSDQNIVDISFQVPAYIYNTNPYYFV FGCNNTRD----NGRIGIVELIISKNEETIKGCNFH---------------SDVIEFFSNNMKPDANECKIDAYPNDIIGFNCqKNQHMISYKQSLDIDA DLDADLENVAVIPNDCFDsisigSNKKYIVNELPGAQTYRSKLRSM--PRYFKVP----YHNNELDVTFHCECTVGSKTNKIIITVKALNGQISkKYEKS EIKSSPSIVDGPVYVCPHKQAIEPKLIKwnikdTETIDSCKIDVNRFySYAQLTCPNNNFSMHSNIQLTYNILKPNKIDEYKtfNESELNKLIPHSEILv dvveSNNDINVDTYNLYLFFPYYIKENYEINVVCDNTNTKYEN----KQGGKYIYNIKIPKRGKKVKGCNFnSNKKSEMFENgEIIKIDENTNTCKIDVK PKDVIAFECPPET-IKITNCFK---DAIIDNKLTNLSTVLQL--NNNISSWTYGHKTSYIEIPAVIDiDATLICICVGLKKIYDIKSVFSPKFLNEIYKK LGIV >UniRef50_A7AT16(267-930:1666) Putative uncharacterized protein n=1 Tax=Babesia bovis RepID=A7AT16_BABBO E=3e-92 s/c=0.52 id=14% cov=52% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- -----EYVCDINNM-----LMKNRVQPIHSFWCSVTLHPGSTLTIRFPPDPNIILSDTTNTSTLQAVYPYETQF--KPSTLEHLHSYTGTTWNKRLESVP YHDRIVGDALELDLSMSDRGLIRIIYMSGKPLGTIKDYDSILFHWHSVPFNKLIDSMISA-SISVQLVPTHIYDTTGCDIGQPSVFNPR------NMAKY IRPKEYIGNTGLMHDCVVKN---FFGV-FHTGIYCGSGNTLMPNGCKQTAYSLYSNTEEPIPSSVvrldllHVEGMQMFKILTNTETIFSMSCncvDPRG FVISRLILENPFSETIGLFIRPYNECLNYRDQHLPY--IDGSMVSYTRGSVPSKTIPLLAQHEK-FYLYPGTKYIFKCQYC--TQDMFHRDNYEYTNRSL KQLATA--------------WIPRDASTTYFKTEP---------FGPSIRFIsanYEDIIMGEKGgltFEIKEKYGAYQEHLVVTYSRGTILISKDESQP TRVTFYFicgilpFMKPLIKERNRLLLSLGSTPPSAKS---FPYGTYKLLELSVETTDPYVHGCGLGFKGETLFrddTITYTEPTSGIKSCVIDLNVNDE GGFYCPPPYIMEPPECFHDVFVGDVVTKLNRI------------------------------------------------------------------- >UniRef50_Q7RHX6(1170-1911:1978) PfS230 paralog-related (Fragment) n=5 Tax=Plasmodium (Vinckeia) RepID=Q7RHX6_PLAYO E=3e-52 s/c=0.28 id=16% cov=58% ------------------------------CNIDLNPFDKFVIKCPPKKNSNTYLKGQEYSDSINTSIEDVQFENfTYRSNLGLNENKMLEKLNNVLFGS LLINKNTNSSFFEQGTLELIISPYSESSKNIVFSCEYLEKDESKGIIGTASIFIKKN--DNKILGCHFIDKSfdvnsleetdehltslayknNSFVFETN LIEGKTvyCDIEAIENDVVGLSCPYNFITTPENCFEYVQIEGTDKELETHkldnllygvkiFKNEMYKQNYTPTYIILPKRINKSLKIFCSCNSITSIQV GIIQINVIGNDLNNWFKKEVIHNIYAYQRQHYYYDFSSGTLSI---------------------TSENDTPISILSDKTYDSNNELDVDVNEIPQLNMLK LNSQEDSTSTEQYKNDNPIDQETHNDDNILNPLRTKKVYEVTITASEFTTIKIVCPLRNYEQFKQSKITPENFFEYVLVKNKEIdaekgislLNLEHIDK IFIDKFKGNDKKNKLETEKyknrdinkdeeeDDEEDDDEEDDDEEDKKNEQEKKKTDKFIKEEIKKVEYDNLGNKIIISVKSKKPKATIEDTDKIyKKKI INESEKYIVKNINDVISYVNYKSEINDNTYESTIYFSPLLLNKAQFFINCDNSLTLNQSKR-GKTAIVKINVHPNSLKIMGCDFV-----------GAYS SYFIFSKKWDQITPNYVCEINVEDDSIIGLACPyNTKIYPSDCFESV----------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ------------------------------- >UniRef50_Q4N4L1(90-554:565) Putative uncharacterized protein n=1 Tax=Theileria parva RepID=Q4N4L1_THEPA E=1e-29 s/c=0.29 id=19% cov=28% ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------- --------------------------------------------------------------CEIEPKPGMVIGIYCaAGETFNDEFCFRDSSGKTYYDP DFKYDGAGQ----------RLHLFRVPENGFGGDVYFLCECRGKNKDTKAQVKIIKASVLSCDLTKIFEKH-EPGKKISLQACRRDLRPGESLKVTVPKN YTEFYYFKHKYSSLF-EPINVQHYAYRQKLDDNEV-----------------RKVKLSDLIVGDGLTIEKTPVRGAVE---YLFKYNRDSILILTSETVS FEYFWTLFHRNPREREVISYlSLNEKVLAVVSIGLFPTDPYTYGCGVRNDffRRELLDFRSEEINNKpTSICKVD-GRNSPIGFYCPRPFLLEPRDCFRS V------------------------------------------------------------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * * 0 * * * 1 0 * * * * * * 1000 0 0 A 2 0 * * * * * * * * * * * * * * * * * * * 2 0 * * * * * * 1000 0 0 Q 3 * * * * * * * * * * * * * 0 * * * * * * 3 0 * * * * * * 1000 0 0 G 4 1065 * * * * 938 * * * * * * * * * * * * * * 4 0 * * * * * * 1440 0 0 I 5 * * * * * * * 588 * * * * * * * * * 1578 * * 5 0 * * * * * * 1934 0 0 K 6 * * * 1631 * * * * 562 * * * * * * * * * * * 6 0 * * * * * * 1934 0 0 H 7 * * * * * * 562 * * 1631 * * * * * * * * * * 7 0 * * * * * * 1934 0 0 N 8 * * 2593 * * 2575 * * * * * 585 * * * * * * * * 8 0 * * * * * * 3109 0 0 N 9 * * * * * * * * 1088 * * 1165 * * 3580 * * * * * 9 0 * * * * * * 3680 0 0 V 10 * * 3138 1882 * * * * * * * * * * * * 2620 2057 * 2237 10 0 * * * * * * 3680 0 0 H 11 * * * * * * 1823 * * * * 3055 * * * * * * * 744 11 0 * * * * * * 3680 0 0 L 12 * * * * 3055 * * 2237 * 1823 * * * * * * * 1378 * * 12 0 * * * * * * 3680 0 0 C 13 * 0 * * * * * * * * * * * * * * * * * * 13 0 * * * * * * 3680 0 0 N 14 * * 869 * * * * * * * * 1144 * * * * * * * * 14 0 * * * * * * 3680 0 0 F 15 * * * * 344 * * * * 2237 * * * * * * * * * * 15 0 * * * * * * 3680 0 0 F 16 * * * 3230 2057 * * * 3141 * 2620 3339 * * 3138 * 2603 * * * 16 0 * * * * * * 3680 0 0 D 17 * * 696 * * 3580 * * 3230 * * 3138 * 3662 * * * * * * 17 0 * * * * * * 3680 0 0 N 18 * * 3055 * * 3230 3138 * * * * 1823 * 2603 * * * * * 2237 18 256 2620 * 1585 585 * * 3680 1130 0 P 19 3141 * * 3055 * * * 3138 3230 1611 * * 2192 * * * * * * * 19 0 * * * * * * 3680 0 0 E 20 3055 * * 3058 * * * 3230 1182 * * 3141 * * * 3339 * * * * 20 0 * * * * * * 3680 0 0 L 21 3138 * * 2237 * * * * * 1527 * * 1611 * * * * * * * 21 332 3230 3339 1000 1000 * * 3680 1000 0 T 22 * * * * * * * * * * * * * * * 3034 188 * * * 22 235 * 2733 * * * 0 3521 0 1000 F 23 * * * 1612 1650 * * * * * * * * * 2162 * 2933 * * * 23 0 * * * * * 0 3121 0 1272 D 24 * * 2587 * * * * * 981 * * * * * * 1612 * * * * 24 0 * * * * * 0 3121 0 1272 N 25 * * * * * 2412 * * 1019 * * 2587 * 2717 * * * * * * 25 238 2717 * 1000 1000 * 0 3121 1000 1272 N 26 * * * 2846 * * * * * * * 1650 1281 * * * 2933 * * * 26 0 * * * * * 0 3121 0 1272 K 27 * * * * * * * 3182 650 * * * * * * * 2846 3142 * * 27 0 * * * * * 0 3121 0 1272 I 28 * * * 2846 * * * 1154 * * * 2162 * * * * * 2412 * * 28 0 * * * * * 0 3121 0 1272 V 29 * 2933 * * * * * * 2412 * * * * * 2846 * * 1650 * 2162 29 0 * * * * 1078 926 3121 0 1272 L 30 * * * 3128 * * 2822 2534 2467 2913 * * * 2894 * * * 3018 * * 30 0 * * * * 0 * 3457 0 1000 C 31 * 144 * * * * * * * * 3393 * * * * * * * * * 31 0 * * * * * * 4038 0 0 K 32 * * 3741 1662 * * * * 1725 * * 3007 * * * * 3354 3562 * * 32 0 * * * * * * 4038 0 0 I 33 * * * * * * * 1228 * 3305 * * * * * * * 1083 * * 33 0 * * * * * * 4038 0 0 D 34 * * 1264 * 2788 * * * 2023 * * 3354 * 3393 * * * * * * 34 154 3305 * 0 * * * 4038 1000 0 A 35 2271 * * 3393 * * * * * 3007 * * 2788 * * * * 2023 * 2454 35 226 2788 * 0 * * * 4038 1083 0 E 36 * * 2454 1506 * * * * 2023 * * 3007 3393 * * * * * * * 36 0 * * * * * * 4038 0 0 L 37 * * * * * * * * * 1725 * * 737 * * * * * * 3354 37 0 * * * * * * 4038 0 0 F 38 * * * * 1592 * * 3305 * 2788 2788 2454 * * * * * 3393 * * 38 144 * 3393 * * * * 4038 0 0 S 39 3086 * 2905 2641 * * * 2643 2342 * * * * * * 2113 * * * * 39 0 * * * * 0 * 3844 0 1000 E 40 * * * 2271 * * * * 1457 * 3354 3305 * * 3562 * * * * 2788 40 0 * * * * * * 4038 0 0 V 41 * * * * 3007 * * 1223 * * * * * * * * * 1161 * * 41 0 * * * * * * 4038 0 0 I 42 2788 * * * * * * 3286 1243 * * 3305 * * * * * 2126 * * 42 0 * * * * * * 4038 0 0 I 43 * * * * 3562 * * 816 * 2043 * * * * * * * 3255 * * 43 0 * * * * * * 4038 0 0 Q 44 * * * * * * * 2023 3007 2454 3255 3741 * 3286 * * * 2598 * * 44 0 * * * * * * 4038 0 0 L 45 * 335 * * * * * * * 2271 * * * * * * * * * * 45 0 * * * * * * 4038 0 0 P 46 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