HHsearch 1.5 NAME c9n2gA_ FAM FILE c9n2gA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9n2gA_.a3m DATE Sat Oct 25 11:42:33 2025 LENG 71 match states, 71 columns in multiple alignment FILT 34 out of 36 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.4472 1.5889 SEQ >ss_pred CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCC >ss_conf 98789999999998646788608999999848877899999999967999999676899999998530159 >Consensus gLtxxdxxiLxfExxxwxxxGaKexAIRxxxglSpxRYYQxLNxLiDxpxAlxxxPxlVxRLrrxrxxrxr >c9n2gA_ GLTRREHDILAFERQWWKFAGVKEEAIKELFSMSATRYYQVLNALVDRPEALAADPMLVKRLRRLRASRQK >UniRef50_C5C8Z7(32-101:120) Putative uncharacterized protein n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Z7_MICLC E=2e-15 s/c=1.19 id=45% cov=100% -LTDLERAVLDLEAATWRYGGAKGHAVRERLGLSPTAYYQVLNGLLDREAALAYRPLLVTRLLRKRGTRSR >UniRef50_C7R0X3(20-89:97) Putative uncharacterized protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R0X3_JONDD E=2e-12 s/c=1.05 id=34% cov=100% -LTEQERAVLDLESRTWTRTASKERAIAEELGLSVTSYYQLLAYVVTKPCAAHHAPAVVRRIRTMTEKNGR >UniRef50_C0VXF3(2-62:64) Putative uncharacterized protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VXF3_9CORY E=5e-07 s/c=0.91 id=32% cov=87% ----DDEALLAFEKEHPTPSGKKNDLIRDH-GITPIAYYQRLNKLIDTAWAREKYPVMLAQLERLR----- >UniRef50_D1YAV8(15-74:94) Putative uncharacterized protein n=2 Tax=Propionibacterium acnes RepID=D1YAV8_PROAC E=2e-06 s/c=0.89 id=34% cov=83% -LCASDRAILDLEESWQAGSLGvdKETAIRDSLGLSSPRYHLRLNELIDDEKAAQYAPSLV------------ >UniRef50_C8NYP3(1-68:75) Putative uncharacterized protein n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NYP3_9CORY E=3e-16 s/c=1.27 id=42% cov=97% -MDPTDLTILDFADRAPRSLGAREEAIRVELGMSPFRYYQKLNTLIDDPTALSHNPQLIRRLQRLRDAR-- >UniRef50_C4LKP3(65-134:136) Putative uncharacterized protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LKP3_CORK4 E=3e-16 s/c=1.23 id=42% cov=100% GLTDDERRMLEFERRVWRRDSAKDELIRRRFNLSPIRYYQRLFRLIQRREALEEFPTTVSRLLRIANSDR- >UniRef50_UPI000185C0A8(43-116:118) conserved hypothetical protein n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C0A8 E=7e-12 s/c=0.97 id=45% cov=90% ------QKMLDFEKEWlkvarrgPRMAGARQEAIRrrfaEDFGNNTIRYHQVLSRLLDSPAAEAAEPVLVHRLRAVRDNQ-- >UniRef50_D2NQZ9(40-106:107) DNA-directed RNA polymerase, beta subunit n=2 Tax=Rothia mucilaginosa RepID=D2NQZ9_9MICC E=8e-12 s/c=1.07 id=38% cov=96% GLTPVERRILEVERRRFKHQGSKEKAIIAA-GFTPIAYYQRLNVMLDDERVRAAAPQMIDVLRARRDA--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 2214 0 0 L 2 * * * * * * * * * 95 3977 * * * * * * * * * 2 0 * * * * * * 3081 0 0 T 3 5446 4382 2760 * * 5015 * * * * * * 5341 * * 1629 1313 * * * 3 0 * * * * * * 3081 0 0 R 4 2890 * 1585 2084 * 5385 * * * * * * 2545 5175 4223 * * 5678 * * 4 0 * * * * * * 3081 0 0 R 5 4770 * 2771 * * * * * * 2951 * * * 3109 1434 4452 4000 3420 * * 5 0 * * * * * * 3156 0 0 E 6 4783 * 1012 1172 * * * * * * * * * 5393 * * * * * * 6 0 * * * * * * 3156 0 0 H 7 3562 4830 * 4549 * * 4343 4825 * 2852 * 4542 * 3927 1068 * * * 5127 * 7 0 * * * * * * 3200 0 0 D 8 1274 * 3302 4679 * * * * 4567 * * * * 3798 2531 4358 3181 * * * 8 0 * * * * * * 3209 0 0 I 9 * * * * * * * 1151 * 2831 3089 * * * * * * 1778 * * 9 0 * * * * * * 3209 0 0 L 10 * * * * * * * * * 0 * * * * * * * * * * 10 0 * * * * * * 3209 0 0 A 11 1382 * 1437 2344 * * * * * * * * * 5148 5511 * * * * * 11 0 * * * * * * 3209 0 0 F 12 * * * * 732 * * * * 1589 * * * * * * * 3936 * * 12 0 * * * * * * 3209 0 0 E 13 4148 * * 84 * * * * * * * * * * * * * * * * 13 0 * * * * * * 3209 0 0 R 14 3286 * 4148 3144 * 4995 * * 3289 * * * * 5547 1120 3147 * * * * 14 0 * * * * * * 3209 0 0 Q 15 5123 * 3392 2776 * * 4308 * * * * * * 2163 1667 3797 3849 * * * 15 0 * * * * * * 3209 0 0 W 16 2612 * * * * 4622 3854 * * * * * * * 4630 3932 2997 4628 1136 * 16 62 4567 * 2807 222 * * 3209 1000 0 W 17 * * * * 3436 * * * * * * * 2020 4515 * * 4112 4748 937 * 17 0 * * * * * * 3209 0 0 K 18 2907 * * * * * 5285 * 2200 * * * 4380 5647 1287 * 2781 * * * 18 0 * * * * * * 3209 0 0 F 19 4215 * 5331 * 5175 2944 2673 * * 5473 4567 5685 4619 * 2596 3145 4841 * * 2567 19 0 * * * * * * 3209 0 0 A 20 2453 * 4628 5473 * 3845 * 3662 * 4148 * * 2219 3731 5136 3566 4531 3276 * * 20 0 * * * * * * 3209 0 0 G 21 3940 * * * * 368 * * * 4515 * * * * 4612 4628 * 4841 * * 21 0 * * * * * * 3209 0 0 V 22 647 * * * * 3668 * * 4619 * * * * * 5152 3278 3584 5175 * * 22 65 4515 * 1000 1000 * * 3209 1000 0 K 23 * * * * * * * * 150 * * * * * 3343 * * * * * 23 0 * * * * * * 3209 0 0 E 24 * * 2969 474 * 5123 * * * * * 4619 * 4567 * 4612 * * * * 24 0 * * * * * * 3209 0 0 E 25 4222 * 3853 1450 * * 5123 * 4630 * * * * 2906 2468 3981 3953 * * * 25 0 * * * * * * 3209 0 0 A 26 182 * * * * * * * * 3624 * * * * * * * 4748 * * 26 0 * * * * * * 3209 0 0 I 27 * * * * * * * 127 * 4748 * * * * * * * 4414 * * 27 60 * 4612 * * * * 3209 0 0 K 28 4445 * * * * 4801 * 4557 5133 * * * * * 302 * * 4782 * * 28 66 4473 * 2000 415 0 * 3157 1000 1000 E 29 2503 * 2266 1387 * * * * * * * * * 5431 4628 3986 4309 4148 * * 29 0 * * * * * * 3209 0 0 L 30 4630 * 4567 1983 * * 4619 * * 3756 * * * 2924 1964 4515 3084 * * * 30 122 * 3624 * * * * 3209 0 0 F 31 * * * * 1038 * * 3792 * 1182 * * * * * * * * * * 31 0 * * * * 0 * 3098 0 1558 S 32 * * 3206 * * 378 * * * * * 4628 * 4208 * 5175 * * * * 32 0 * * * * * * 3209 0 0 M 33 * 5547 * * 3991 * * 2479 * 1242 2490 4567 * * * * * 3421 * * 33 0 * * * * * * 3209 0 0 S 34 4592 * * * * * * * * * * 4567 * * * 492 2283 * * * 34 0 * * * * * * 3209 0 0 A 35 3447 * * * * * * * 4995 * * * 672 * * 3024 3589 4531 * * 35 0 * * * * * * 3209 0 0 T 36 4143 * * * 4148 * * 2611 * * * * 4515 * * 5152 1460 1796 * * 36 0 * * * * * * 3209 0 0 R 37 2825 * * * * * 5136 * * * * * * * 345 4531 * * * * 37 0 * * * * * * 3209 0 0 Y 38 * * * * * * * * * * * * * * * * * * * 0 38 0 * * * * * * 3209 0 0 Y 39 * * * * 5324 * 2756 * * * * * * * * * * * * 274 39 0 * * * * * * 3209 0 0 Q 40 * * * * * * * * * 3562 * * * 178 * * * 4995 * * 40 0 * * * * * * 3209 0 0 V 41 * * * * * * * 4638 4148 1551 4172 * * * 1445 * * 2842 * * 41 0 * * * * * * 3209 0 0 L 42 * * * * * * * * * 0 * * * * * * * * * * 42 0 * * * * * * 3209 0 0 N 43 4531 * * * 4628 4535 * * * * * 267 * * * 4567 * * * * 43 0 * * * * * * 3209 0 0 A 44 1481 * * 4515 * 5123 * 5132 3955 5148 * * * 5473 2354 5431 4148 3221 * 4531 44 0 * * * * * * 3209 0 0 L 45 5132 * * * * * * 3711 * 442 4630 * * * * * * 3073 * * 45 0 * * * * * * 3209 0 0 V 46 * * * * * * * 1046 * 1362 * * * * * * * 2981 * * 46 0 * * * * * * 3209 0 0 D 47 4612 * 383 3644 * * * * * * * * * 4628 * 5136 4531 * * * 47 0 * * * * * * 3209 0 0 R 48 * * 1910 4995 * * * * 3899 3927 * 3117 * * 2835 2628 2712 * * * 48 0 * * * * * * 3209 0 0 P 49 4619 * * 2231 * * * * * * * * 711 5394 3163 * * * * * 49 0 * * * * * * 3209 0 0 E 50 1294 4531 * 2054 * * 4612 * 4515 * * * * * 2982 * 4148 * 4619 * 50 0 * * * * * * 3209 0 0 A 51 103 * * * * * * * * * * * * * * * * 3859 * * 51 0 * * * * * * 3209 0 0 L 52 3115 * * 3655 5152 * 5331 * * 1031 3236 * * * 3035 * * 4850 * * 52 0 * * * * * * 3209 0 0 A 53 1355 * * 2737 * * 3899 * 3498 * 4612 * * 4515 2996 4148 * 4748 * * 53 0 * * * * * * 3209 0 0 A 54 1763 * * 2768 5473 * 2514 5148 4619 5685 * * * 4134 * 5331 * 5285 * 2598 54 0 * * * * * * 3209 0 0 D 55 2351 * 1459 3216 4571 * 5136 * * * * 3600 * * 3799 * * * * 3212 55 0 * * * * * * 3210 0 0 P 56 * * * * * * * * * * * * 0 * * * * * * * 56 0 * * * * * * 3210 0 0 M 57 4407 * * 3896 * * * * * 4044 2135 * * 2856 * 3608 3292 1862 * * 57 0 * * * * * * 3221 0 0 L 58 * * * * * * * * * 802 3419 * * * * * 2141 3238 * * 58 0 * * * * * * 3221 0 0 V 59 * * * * * * * 2603 * 4361 * * * * * * 4831 412 * * 59 0 * * * * * * 3221 0 0 K 60 3302 * 4231 * * * 3363 * 2476 * * 2495 * * 3134 2309 3733 * * * 60 0 * * * * * * 3191 0 0 R 61 * * * * * * * * * * * * * 3810 216 * * 3883 * * 61 0 * * * * * * 3145 0 0 L 62 * * * * * * * 3572 * 127 * * * * * * * * * * 62 0 * * * * * * 3145 0 0 R 63 * * * 3776 * * * * * 3033 * * * 4005 429 * * * * * 63 0 * * * * * * 3175 0 0 R 64 2901 * * * * 4199 * * 4286 * * * * * 574 * 3492 * * * 64 0 * * * * * * 3175 0 0 L 65 4515 * * * * * * 3090 4176 1834 3492 * * * 2278 * 4214 2697 * * 65 0 * * * * * * 3175 0 0 R 66 2732 * * * * * * * * * * * * * 395 * 3492 * * * 66 0 * * * * * * 3175 0 0 A 67 4296 * 1270 3426 * 2753 * * * * * 3706 * * * * 2208 * * * 67 0 * * * * * * 3068 0 0 S 68 1788 * * * * * * * 3165 * * 2698 * 3747 * 1768 3703 * * * 68 0 * * * * * * 3003 0 0 R 69 * * 3170 * * * * * 3734 * * 2912 * 3364 777 * * * * * 69 0 * * * * * * 2872 0 0 Q 70 * * * 2782 * 2474 * * * * * * * 1979 1811 2877 * * * * 70 0 * * * * * * 2500 0 0 K 71 * * * * * * * * 2175 * * * * * 361 * * * * * 71 0 * * 0 * * * 2007 0 0 //