HHsearch 1.5 NAME c9mlsH_ FAM FILE c9mlsH_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9mlsH_.a3m DATE Sat Nov 1 11:47:28 2025 LENG 91 match states, 91 columns in multiple alignment FILT 56 out of 58 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.2 EVD 0.3710 -2.5775 SEQ >ss_pred CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9617889999999867787737999999999999999999999999999707677678999999999757999999999999999864239 >Consensus kxsyxxYixkvLKqVxpdxxiSxkamximnSfvxDiferIAxEAsxLaxxxkrxTitxreIqtAvxllLPgeLakxAvxegtkAvxxxxss >c9mlsH_ KESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA >UniRef50_UPI0000EBE7A7(79-166:168) PREDICTED: similar to H2B histone family, member W, testis-specific n=6 Tax=Bos taurus RepID=UPI0000EBE7A7 E=5e-25 s/c=1.31 id=48% cov=97% ---FATYFPRVLRQIHKGMSLSRDSVNILDSFVKDMFERIAEEAGRLARNNKRRTITHEDIEAAVRLLLPGDLCKYAINVATKSLIGYHT- >UniRef50_A4I7E8(179-268:278) Histone H2B n=9 Tax=Trypanosomatidae RepID=A4I7E8_LEIIN E=6e-24 s/c=1.23 id=46% cov=100% -QHWDLYIHRALRRFFKRGTLSKAAVRVLSSFIEDMFNRIQTEAVFVAKINKVKTLTAREIQTSARLLLPPELAKHAMSEGTKAVAKYNAS >UniRef50_B7XI58(40-128:133) tRNA and rRNA cytosine-C5-methylase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XI58_ENTBH E=4e-06 s/c=0.59 id=27% cov=97% ---FKSAIKKCLKESVPDgtVTITRNSLAVLCGIAQSILEDASVLSAELAQKVNKKTIGGEEVITAFELMLTGELKKLCVREIKNTLSKMNT- >UniRef50_C4V8I2(38-124:137) Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V8I2_NOSCE E=5e-12 s/c=0.83 id=29% cov=86% ---FKSAIKKIAKDINPDQTvfLTSQAIAILCAIAYDIVSTCGEVASEFSKKVSKQTVGADEIVAAFEILLKGELKKLALRE----------- >UniRef50_Q54BC2(17-103:226) Histone H2B.v1 n=1 Tax=Dictyostelium discoideum RepID=H2BV1_DICDI E=2e-19 s/c=1.11 id=40% cov=97% ----GIYIKKLIKQINPACRIQVKSVQILTSLIRDTTISIMNEAFHLVQLSNKRTLSARDVQTSVRLCTVGEISRHAVSEGVKRVTNFNSA >UniRef50_Q2HW83(21-100:109) Histone H2B; Histone-fold n=1 Tax=Medicago truncatula RepID=Q2HW83_MEDTR E=9e-13 s/c=0.93 id=31% cov=89% ---WQLELTNIRKQVCPDLKLQLGGMKMMDSMVNYFMKKLIAEA---TKHVDSNCLDVREIMAAVYQVFPEQLAKNAHQRGLEAVN----- >UniRef50_B0DVY0(43-113:114) Predicted protein (Fragment) n=3 Tax=Laccaria bicolor S238N-H82 RepID=B0DVY0_LACBS E=5e-13 s/c=1.07 id=46% cov=78% EESYSSYIY---KGVHPDTGISKKAMAILKSFVNNIFKHIATEPSSTCHVGLRLSHSVFMLITSINFVLQDQI------------------ >UniRef50_Q7KWR7(2-80:474) Histone H2B.v2 n=1 Tax=Dictyostelium discoideum RepID=H2BV2_DICDI E=2e-10 s/c=0.85 id=26% cov=88% -ESYSPSIQKLCVFLKPESDISNTGISYLNNFLADMSNAIIVESIHSSKSHKHKTILIEDIESALNVVFPSEIADSIINQ----------- >UniRef50_Q28GH7(28-92:98) Novel protein n=3 Tax=Xenopus (Silurana) tropicalis RepID=Q28GH7_XENTR E=2e-10 s/c=1.04 id=47% cov=70% KGRYSSFIYRVLKQ---NQRKSSFASLSKESTGKETCLCIADEAARLSLYNKRKTITCQEIQSAVK------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * 2126 * * * * 483 * * * * * 4169 * * * * * 1 0 * * * * * * 2903 0 0 E 2 * * 2829 1235 * 2721 * 4929 4465 * * 4218 * 4287 3328 * * * * * 2 0 * * * * * * 3761 0 0 S 3 * * 4480 5217 * 4416 3768 * * * * 3574 * 5053 4298 986 2857 * * * 3 0 * * * * * * 3766 0 0 Y 4 * * * * 1572 * * * * 5542 * * * * * * * * 2921 971 4 0 * * * * * * 4329 0 0 S 5 2594 * 4838 * 5120 3519 * * 2532 * * 3794 * 4393 3506 1794 6119 * * * 5 0 * * * * * * 4385 0 0 I 6 5849 * * * * * 5958 2638 * 2448 6647 4324 3962 * 4171 2166 3240 3128 * * 6 0 * * * * * * 4385 0 0 Y 7 3160 * * 4393 4216 * * * * 5958 * * * * * 4329 * * * 472 7 0 * * * * * * 4385 0 0 V 8 * * * * 3433 * * 888 * 3480 5262 * * * 5616 4867 5407 2529 * * 8 0 * * * * * * 4320 0 0 Y 9 * * * * 4762 * 3787 5761 2578 * * 3859 3205 4387 5215 4527 3979 * 5232 1646 9 57 * 4690 * * * * 4320 0 0 K 10 5618 * * * * * * * 969 * * 4416 * 6012 1363 * * * * 5829 10 17 * 6414 * * * 0 4243 0 1000 V 11 4866 4789 * * * 5345 * 2230 * 3001 * * * * * 3994 5719 1044 * * 11 0 * * * * * 0 4367 0 1428 L 12 4676 4343 * * * * * 3346 * 508 6113 * * 6027 4453 4855 * * * * 12 0 * * * * 980 1021 4367 0 1428 K 13 * * * * * * * * 322 * * * * * 3216 5764 5214 4401 * * 13 27 5745 * 2585 263 * 0 4320 1000 1000 Q 14 5512 * 4292 2629 4401 4671 * * 6087 4248 * 6076 * 931 4964 4631 * * * * 14 77 * 4271 * * 0 * 4320 0 1000 V 15 5648 * * * 4947 * * 1871 * 4365 6197 * * * * 4793 * 796 * * 15 0 * * * * * 0 4250 0 1302 H 16 * 4438 5157 4958 4191 * 1068 5300 4365 * * 3076 * * 5164 4886 5877 4028 * 5084 16 0 * * * * * 0 4250 0 1302 P 17 * * * 4605 * * 5084 * 4107 5629 * 5684 521 5088 * 5416 4262 5056 * * 17 0 * * * * 862 1152 4250 0 1302 D 18 4772 * 1039 2897 5118 2899 4594 * * * * 3677 5892 * 4968 6489 * * * * 18 52 4825 * 1000 1000 * 0 4297 1000 1000 T 19 * 4772 * * 6085 4968 * 3895 5291 2137 3917 4927 * 3465 5353 4391 1839 4177 * * 19 24 5892 * 3585 126 * 0 4297 1000 1000 G 20 * * 4402 * * 1202 * 5143 4491 * * 4940 * * 3417 2522 2788 * * * 20 54 4777 * 1000 1000 * 0 4298 1000 1000 I 21 6214 * * * 5743 * * 766 5089 1808 4602 * * * * * * 5391 * * 21 48 4940 * 1000 1000 0 * 4298 1000 1000 S 22 * * 5963 * * * * * * * * * * 3690 * 473 2425 * * * 22 0 * * * * * * 4316 0 0 S 23 5512 * * 5228 * 3567 6218 * 2794 3956 * 3945 6059 3957 3798 1483 6121 4888 * 5450 23 0 * * * * * * 4316 0 0 K 24 4981 * 4706 5171 5161 4517 6299 * 1192 * 5754 3914 5589 3143 3467 * 4413 * * 5386 24 0 * * * * * * 4316 0 0 A 25 1111 * * 5465 * 3004 * * * 5228 * * * * * 1978 3310 6907 * * 25 23 * 5963 * * * * 4316 0 0 M 26 * * * * * * * 2586 * 3476 1110 * * 5440 * 4169 4777 2597 * * 26 0 * * * * 0 * 4315 0 1000 G 27 3209 * 3813 3651 * 3630 5115 6730 3624 4127 5268 3812 * 3727 3993 2343 4899 5826 * * 27 0 * * * * * * 4463 0 0 I 28 * * * * 6055 * 5115 1075 * * 4580 6690 * * * 3779 * 1691 * 4399 28 0 * * * * * * 4463 0 0 M 29 * * * * * * 5667 6801 5040 1545 1202 * * * * * 5044 3653 * 4216 29 0 * * * * * * 4463 0 0 N 30 * 3247 2179 5040 * * * 4365 4286 * * 1086 * * * 4523 5110 * * * 30 0 * * * * * * 4463 0 0 S 31 4737 * * * * 3665 * 5392 * * 4649 3751 5115 * * 593 4216 * * * 31 29 * 5667 * * * * 4463 0 0 F 32 * * * * 880 * * 3236 * 2513 3043 * * * * * 4971 * * 5500 32 0 * * * * * 0 4451 0 1000 V 33 3806 * * * * 4994 * 2310 4965 3611 3094 * * * * 4908 * 1214 * * 33 0 * * * * 0 * 4439 0 1000 N 34 3800 * * 4991 * 6259 4630 * 2965 * * 1211 * 4223 3810 4472 * 5195 * 3536 34 0 * * * * * * 4457 0 0 D 35 * * 499 4055 * 5204 5195 * * * * 4112 * * * 4192 * * * 3940 35 0 * * * * * * 4457 0 0 I 36 * * * * 3803 * * 1115 * 3705 2340 5195 * 5654 * * 3340 4424 * * 36 0 * * * * * * 4457 0 0 F 37 * 5155 * * 675 * * * * 3181 3544 * * * * 4437 4834 3868 * * 37 0 * * * * * * 4330 0 0 E 38 * * 3366 1010 * 5125 5220 4834 3351 5155 * 3458 * 4435 * 4788 * * * 5926 38 0 * * * * * * 4330 0 0 R 39 4437 4411 4896 * * * 4729 5220 3529 * * 5195 * 5047 897 4084 3868 * * * 39 0 * * * * * * 4330 0 0 I 40 4896 4788 * * * * * 480 * 2603 * * 5926 * * * * 4954 * * 40 0 * * * * * * 4330 0 0 A 41 489 * * * * 4788 * 3357 * * 4834 * * 5049 * 4896 5926 4701 * * 41 30 * 5599 * * * * 4330 0 0 G 42 3401 5274 2857 2817 * 3837 * * 4502 * 4548 4779 * 5064 4874 3137 2868 3447 * * 42 0 * * * * * 0 4329 0 1000 E 43 * * 5030 280 * * * * 4541 3914 * * * * * * * 4780 * * 43 0 * * * * * 0 4329 0 1000 A 44 290 * * 6124 * * * * * * * * 4682 * * 3185 5707 * * * 44 62 * 4560 * * * 0 4326 0 1000 S 45 1940 5220 * * 4688 2962 * 4323 * * * 5860 * * * 1161 * 5013 * * 45 0 * * * * * 0 4199 0 1578 R 46 * * * 3226 3991 5870 3153 5130 4337 4870 * 3970 * 4084 1603 3087 5736 * * * 46 0 * * * * * 0 4199 0 1578 L 47 * * * * 4730 * * 4266 * 514 4578 * * 5220 * 4323 4594 4330 * * 47 0 * * * * 816 1212 4199 0 1578 A 48 1196 3933 * * * 5353 * * * 4511 4219 * * * * 2474 3383 3319 * * 48 0 * * * * * 0 4326 0 1000 H 49 * 4650 6245 * 5247 6220 2645 * 1736 4246 * * 8182 2543 2483 5650 * * * 5601 49 16 * 6497 * * * 0 4326 0 1000 Y 50 4008 * 6199 * * * 3651 4308 2792 3372 * 4880 * 5045 * 3766 * 4119 * 1483 50 0 * * * * * 0 4333 0 1446 N 51 4143 * * * * 4675 3486 * 3940 * * 1863 * * 5236 2729 2963 2775 * 5431 51 0 * * * * * 0 4333 0 1446 K 52 * * 4547 * * 3364 5799 * 1094 4675 * 3003 * 5431 3113 3819 * * * * 52 0 * * * * * 0 4333 0 1446 R 53 * * * * * * 3139 * 1633 * * 6076 * 5659 1182 4106 * 5023 * * 53 0 * * * * 0 * 4337 0 1446 S 54 * 5366 * * * 5303 * * 2336 3070 6302 4072 6934 3565 2904 2129 3612 5358 * * 54 0 * * * * * * 4330 0 0 T 55 * 4595 * * * 5632 * 6074 * * * * * * * 4713 175 * * * 55 0 * * * * * * 4298 0 0 I 56 * * * * * * 4714 1246 * 1227 5233 * * * 5713 * * 3887 * * 56 0 * * * * * * 4298 0 0 T 57 5233 * 4172 * * 2462 5973 5976 * 4448 * 6136 * 5417 * 2348 1235 * * * 57 0 * * * * * * 4298 0 0 S 58 2361 5170 * * 5940 4914 4883 3853 4577 6023 * * 4477 * * 1399 4778 3221 * * 58 0 * * * * * * 4298 0 0 R 59 * * 3887 3272 4714 3983 5976 * 3821 * * 5233 * 4293 889 * * * 5417 * 59 0 * * * * * * 4298 0 0 E 60 5417 * 1848 723 * * * * * * 4714 * 4795 * * * * 5713 * * 60 0 * * * * * * 4298 0 0 I 61 * * * * * * * 541 * 3155 * * * * * * * 2318 * * 61 0 * * * * * * 4298 0 0 Q 62 * * * 2738 * * * 3255 5178 * 4600 6222 * 673 * * * 4807 * * 62 0 * * * * * * 4251 0 0 T 63 2636 * 5850 5422 * 5234 7388 * * * 4724 * * 4488 * 2180 1218 4928 * * 63 0 * * * * * * 4251 0 0 A 64 305 * * 5647 * 5762 * * * * * * 7388 * * 2973 5722 * * * 64 0 * * * * * * 4251 0 0 V 65 4282 * * * 3277 * * 3715 * 4327 4699 * * * * * 5485 603 * * 65 0 * * * * * * 4197 0 0 R 66 * 5720 5302 3277 * * 3156 * 2710 * * 3545 * * 1201 * * * * 3906 66 0 * * * * * * 4197 0 0 L 67 * * * * 4238 * 5677 3553 5257 521 * * * 4515 5331 * * 4305 * * 67 0 * * * * * * 4163 0 0 L 68 * 4844 * * 5459 * 5677 4164 * 1182 4290 * * * * * 5823 1483 * * 68 0 * * * * * * 4163 0 0 L 69 * * * * 3249 * * 5407 * 292 * * * * * * 4844 5677 * * 69 0 * * * * * * 4163 0 0 P 70 5459 * * * * * * * 3450 * * * 392 4791 * * 4238 4844 * * 70 0 * * * * * * 4163 0 0 G 71 4915 * 4036 4515 * 642 4912 * 5171 * * * 4331 * 5117 3612 * * * * 71 0 * * * * * * 4163 0 0 E 72 * * 2844 631 * 5547 * * 3678 * * * * 3113 * * * * * * 72 0 * * * * * * 4106 0 0 L 73 * * * * * * * 2428 * 362 4798 * * * * * * * * * 73 0 * * * * * * 4046 0 0 A 74 953 4144 * * * 2730 * * 3606 4874 * 5220 * 4658 4748 4156 * * * * 74 0 * * * * * * 3982 0 0 K 75 * * 4315 4874 * * * * 495 * * 6007 * 5572 3046 * 5067 * 5761 * 75 0 * * * * * * 3982 0 0 H 76 * * * * * * 978 * * 2240 * 3621 * * 4668 4315 * * * 3187 76 0 * * * * * * 3982 0 0 A 77 230 4429 * * * * * 3710 * * * * * * * * * 5342 * * 77 0 * * * * * * 3982 0 0 V 78 5761 * 4874 4780 * * 4433 2327 * 4807 3412 * * * 5256 * 5106 1057 * * 78 0 * * * * * * 3982 0 0 S 79 2089 * 5256 * * * * * * 4354 * 3573 * 4433 2704 1410 5067 * * * 79 0 * * * * * * 3982 0 0 E 80 * * 4874 667 4131 * 5106 * 4132 * * * * 3228 3856 * * 5859 * * 80 0 * * * * * * 3982 0 0 G 81 3215 * * * * 341 * 4200 * * * * * * * * * 4375 * * 81 0 * * * * * * 3761 0 0 T 82 * * 3876 * * * 4375 * 4200 3802 5475 4967 * 5090 * 2891 1017 4483 * * 82 0 * * * * * * 3761 0 0 K 83 * * * 3694 * * * * 749 * 4521 2827 * 5364 3899 5090 5475 * * * 83 0 * * * * * * 3761 0 0 A 84 227 * * * * * * * * * * * * * 4483 4437 4200 * * * 84 0 * * * * * * 3761 0 0 V 85 4705 * * * 4415 * * 3799 * 2263 4521 * * * * * * 759 * * 85 31 * 5565 * * * * 3761 0 0 T 86 4009 * * 4920 * * 3827 3557 5074 4686 6236 3736 * * * 1792 1943 4518 * * 86 0 * * * * 0 * 3790 0 1000 K 87 * * * * * 5703 5496 * 1152 * 5241 2437 5283 * 2379 * 4282 * 5146 * 87 0 * * * * * * 3620 0 0 Y 88 5194 * * * 1515 * 6257 * * * 3641 * * * * * * * * 917 88 0 * * * * * * 3458 0 0 T 89 * * * 4455 * * 5286 3421 3194 5372 3820 2058 * * 5184 4647 1627 * * * 89 0 * * * * * * 3457 0 0 S 90 3591 * 4060 * 5533 * 4593 * 4770 * * * * * 5180 893 2385 * * * 90 0 * * * * * * 3434 0 0 A 91 2142 * * * * * * * * * * * * * * 371 * * * * 91 0 * * 0 * * * 2874 0 0 //