HHsearch 1.5 NAME c9mlsD_ FAM FILE c9mlsD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9mlsD_.a3m DATE Sat Nov 1 12:18:37 2025 LENG 92 match states, 92 columns in multiple alignment FILT 56 out of 58 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.2 EVD 0.3679 -2.5957 SEQ >ss_pred CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 97508889999999966787727999999999999999999999999998607667778999999999757999999999999999964239 >Consensus rxxsyxxYixkvLKqVhpdxxiSxkamximnSfvnDiferIAxEAsxLaxxxkrxTitxreIqtAvxllLPgeLakxAvxegtkAvxxxxss >c9mlsD_ RKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA >UniRef50_B0DVY0(43-112:114) Predicted protein (Fragment) n=3 Tax=Laccaria bicolor S238N-H82 RepID=B0DVY0_LACBS E=1e-08 s/c=0.87 id=46% cov=77% -EESYSSYIY---KGVHPDTGISKKAMAILKSFVNNIFKHIATEPSSTCHVGLRLSHSVFMLITSINFVLQDQI------------------ >UniRef50_Q2HW83(21-101:109) Histone H2B; Histone-fold n=1 Tax=Medicago truncatula RepID=Q2HW83_MEDTR E=6e-13 s/c=0.93 id=30% cov=89% ----WQLELTNIRKQVCPDLKLQLGGMKMMDSMVNYFMKKLIAEA---TKHVDSNCLDVREIMAAVYQVFPEQLAKNAHQRGLEAVNQ---- >UniRef50_UPI0000EBE7A7(79-166:168) PREDICTED: similar to H2B histone family, member W, testis-specific n=6 Tax=Bos taurus RepID=UPI0000EBE7A7 E=1e-24 s/c=1.30 id=48% cov=96% ----FATYFPRVLRQIHKGMSLSRDSVNILDSFVKDMFERIAEEAGRLARNNKRRTITHEDIEAAVRLLLPGDLCKYAINVATKSLIGYHT- >UniRef50_Q54BC2(17-103:226) Histone H2B.v1 n=1 Tax=Dictyostelium discoideum RepID=H2BV1_DICDI E=6e-19 s/c=1.09 id=40% cov=96% -----GIYIKKLIKQINPACRIQVKSVQILTSLIRDTTISIMNEAFHLVQLSNKRTLSARDVQTSVRLCTVGEISRHAVSEGVKRVTNFNSA >UniRef50_C4V8I2(39-124:137) Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V8I2_NOSCE E=5e-12 s/c=0.84 id=29% cov=85% ----FKSAIKKIAKDINPDQTvfLTSQAIAILCAIAYDIVSTCGEVASEFSKKVSKQTVGADEIVAAFEILLKGELKKLALRE----------- >UniRef50_B7XI58(40-128:133) tRNA and rRNA cytosine-C5-methylase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XI58_ENTBH E=2e-11 s/c=0.79 id=27% cov=96% ----FKSAIKKCLKESVPDgtVTITRNSLAVLCGIAQSILEDASVLSAELAQKVNKKTIGGEEVITAFELMLTGELKKLCVREIKNTLSKMNT- >UniRef50_Q28GH7(28-92:98) Novel protein n=3 Tax=Xenopus (Silurana) tropicalis RepID=Q28GH7_XENTR E=5e-10 s/c=1.01 id=47% cov=70% -KGRYSSFIYRVLKQ---NQRKSSFASLSKESTGKETCLCIADEAARLSLYNKRKTITCQEIQSAVK------------------------- >UniRef50_Q7KWR7(2-80:474) Histone H2B.v2 n=1 Tax=Dictyostelium discoideum RepID=H2BV2_DICDI E=2e-10 s/c=0.85 id=26% cov=87% --ESYSPSIQKLCVFLKPESDISNTGISYLNNFLADMSNAIIVESIHSSKSHKHKTILIEDIESALNVVFPSEIADSIINQ----------- >UniRef50_A4I7E8(177-268:278) Histone H2B n=9 Tax=Trypanosomatidae RepID=A4I7E8_LEIIN E=2e-24 s/c=1.23 id=46% cov=101% RSQHWDLYIHRALRRFFKRGTLSKAAVRVLSSFIEDMFNRIQTEAVFVAKINKVKTLTAREIQTSARLLLPPELAKHAMSEGTKAVAKYNAS # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 2431 * * * * * 296 * * * * * 1 0 * * * * * * 2502 0 0 K 2 * * * 3210 * 4393 2583 * 1023 * * * * * 4706 2767 * * * * 2 0 * * * * * * 3502 0 0 E 3 * * 2846 1197 * 2720 * 4948 6009 * * 4349 * 4323 3351 * 5164 * * * 3 0 * * * * * * 3784 0 0 S 4 * * 4505 5221 * 4395 3782 * * * * 3608 * * 4231 923 2772 * * * 4 0 * * * * * * 3787 0 0 Y 5 * * * * 1535 * * * * 5563 * * * * * * * * 2967 984 5 25 * 5849 * * * * 4341 0 0 S 6 2599 * 4850 * 5127 3530 * * 2601 * * 3798 * 4394 3295 1813 6125 * * * 6 0 * * * * * 0 4395 0 1000 I 7 5856 * * * * * 5965 2590 * 2455 6653 4331 3973 * 4173 2178 3245 3145 * * 7 0 * * * * * 0 4395 0 1000 Y 8 3163 * * 4394 4217 * * * * 5965 * * * * * 4341 * * * 471 8 0 * * * * * 0 4395 0 1000 V 9 * * * * 3440 * * 882 * 3483 5292 * * * 5623 4868 5415 2535 * * 9 0 * * * * 0 * 4327 0 1000 Y 10 * * * * 4576 * 3817 5785 2600 6012 * 3888 3265 4417 5232 4546 4034 * 5249 1674 10 56 * 4713 * * * * 4325 0 0 K 11 5626 * * * * * * * 960 * * 4418 * 6020 1373 * * * * 5849 11 17 * 6421 * * * 0 4254 0 1000 V 12 4878 4798 * * * 5396 * 2234 * 3011 * * * * * 4005 5731 1033 * * 12 0 * * * * * 0 4379 0 1428 L 13 4679 4358 * * * * * 3357 * 503 6126 * * 6106 4455 4856 * * * * 13 0 * * * * 980 1021 4379 0 1428 K 14 * * * * * * * * 320 * * * * * 3223 5775 5224 4414 * * 14 27 5747 * 2585 263 * 0 4330 1000 1000 Q 15 5518 * 4263 2636 4414 4690 * * 6096 4252 * 6086 * 927 4975 4637 * * * * 15 75 * 4299 * * 0 * 4330 0 1000 V 16 5651 * * * 4959 * * 1874 * 4379 6254 * * * * 4799 * 791 * * 16 0 * * * * * 0 4262 0 1302 H 17 * 4442 5161 4961 4202 * 1059 5315 4379 * * 3084 * * 5174 4887 5883 4041 * 5097 17 0 * * * * * 0 4262 0 1302 P 18 * * * 4611 * * 5097 * 4119 5667 * 5696 519 5096 * 5425 4265 5011 * * 18 0 * * * * 862 1152 4262 0 1302 D 19 4784 * 1030 2913 5121 2895 4604 * * * * 3690 5899 * 4980 6507 * * * * 19 52 4831 * 1000 1000 * 0 4309 1000 1000 T 20 * 4784 * * 5984 4980 * 3770 5300 2144 3929 4929 * 3471 5376 4405 1855 4187 * * 20 24 5899 * 3585 126 * 0 4309 1000 1000 G 21 * * 4405 * * 1221 * 5121 4459 * * 4929 * * 3397 2505 2779 * * * 21 54 4765 * 1000 1000 * 0 4309 1000 1000 I 22 6194 * * * 5774 * * 778 5066 1789 4604 * * * * * * 5348 * * 22 48 4929 * 1000 1000 0 * 4309 1000 1000 S 23 * * * * * * * * * * * * * 3657 * 450 2406 * * * 23 0 * * * * * * 4325 0 0 S 24 5489 * * 5206 * 3473 6217 * 2937 3922 * 3937 6048 3944 3782 1473 6098 4854 * 5430 24 0 * * * * * * 4325 0 0 K 25 4988 * 4696 5157 5136 4484 6267 * 1207 * 5785 3903 5556 3120 3463 * 4417 * * 5386 25 0 * * * * * * 4325 0 0 A 26 1078 * * 5501 * 3185 * * * 5206 * * * * * 1959 3298 6905 * * 26 0 * * * * * * 4325 0 0 M 27 * * * * * * * 2582 * 3482 1102 * * 5501 * 4171 4803 2608 * * 27 0 * * * * * * 4325 0 0 G 28 3206 * 3805 3946 * 3540 5117 6726 3575 4129 5246 3731 * 3721 3983 2340 4868 5835 * * 28 0 * * * * * * 4437 0 0 I 29 * * * * 6043 * 5117 1059 * * 4533 5964 * * * 4104 * 1681 * 4421 29 0 * * * * * * 4437 0 0 M 30 * * * * * * 5746 6797 5031 1537 1182 * * * * * 5038 3623 * 4479 30 0 * * * * * * 4437 0 0 N 31 * 3250 2113 5031 * * * 4397 4781 * * 1071 * * * 4497 5104 * * * 31 0 * * * * * * 4437 0 0 S 32 4745 * * * * 3672 * 5420 * * 4649 3776 5122 * * 587 4217 * * * 32 27 * 5755 * * * * 4437 0 0 F 33 * * * * 858 * * 3245 * 2586 3034 * * * * * 4973 * * 5467 33 0 * * * * * 0 4428 0 1000 V 34 3818 * * * * 4970 * 2229 5019 3616 3201 * * * * 4913 * 1219 * * 34 0 * * * * 0 * 4499 0 1000 N 35 3776 * * 4983 * 6228 4544 * 2987 * * 1201 * 4258 3850 4510 * 5236 * 3541 35 0 * * * * * * 4509 0 0 D 36 * * 513 4069 * 4874 5236 * * * * 4144 * * * 4228 * * * 3858 36 0 * * * * * * 4509 0 0 I 37 * * * * 3737 * * 1126 * 3701 2340 5236 * 5728 * * 3341 4376 * * 37 0 * * * * * * 4509 0 0 F 38 * 5123 * * 682 * * * * 3169 3524 * * * * 4405 4859 3876 * * 38 0 * * * * * * 4379 0 0 E 39 * * 3358 1012 * 5173 5205 4859 3330 5123 * 3438 * 4487 * 4798 * * * 5915 39 0 * * * * * * 4379 0 0 R 40 4405 4421 4907 * * * 4761 5205 3395 * * 5234 * 5091 908 4140 3876 * * * 40 0 * * * * * * 4379 0 0 I 41 4907 4798 * * * * * 501 * 2510 * * 5915 * * * * 4957 * * 41 0 * * * * * * 4379 0 0 A 42 504 * * * * 4798 * 3246 * * 4859 * * 5038 * 4907 5915 4694 * * 42 29 * 5638 * * * * 4379 0 0 G 43 3358 5219 3044 2707 * 3850 * * 4521 * 4573 4805 * 4789 4914 3168 2861 3436 * * 43 0 * * * * * 0 4378 0 1000 E 44 * * 4790 288 * * * * 4548 3922 * * * * * * * 4791 * * 44 0 * * * * * 0 4378 0 1000 A 45 312 * * 6206 6039 * * * * * * * 4717 * * 3187 5785 * * * 45 67 * 4471 * * * 0 4378 0 1000 S 46 2003 5275 * * 4693 2945 * 4288 * 5992 * 5850 * * * 1182 * 4997 * * 46 0 * * * * * 0 4237 0 1578 R 47 * * * 3230 3988 5908 3147 5169 4649 4890 * 3983 * 4088 1537 3129 5755 * * * 47 0 * * * * * 0 4237 0 1578 L 48 * * * * 4733 * * 4265 * 512 4643 * * 5259 * 4268 4610 4315 * * 48 0 * * * * 816 1212 4227 0 1578 A 49 1202 3960 * * * 4720 * * * 4567 4244 * * * * 2537 3374 3330 * * 49 0 * * * * * 0 4378 0 1000 H 50 * 4692 6243 * 5306 6249 2631 * 1724 4280 * * 8280 2633 2387 5730 * * * 5672 50 21 * 6092 * * * 0 4378 0 1000 Y 51 3998 * 6215 * * * 3596 4297 2785 3400 * 4899 * 5031 * 3733 * 4131 * 1497 51 0 * * * * * 0 4373 0 1446 N 52 4119 * * * * 4709 3490 * 3948 * * 1814 * * 5293 2738 3055 2746 * 5565 52 0 * * * * * 0 4382 0 1446 K 53 * * 4443 * * 3350 6721 * 1109 4709 * 3011 * 5565 2945 3843 * * * * 53 0 * * * * * 0 4382 0 1446 R 54 * * * * * * 3132 * 1627 * * 6074 * 5659 1195 4055 * 5022 * * 54 0 * * * * 0 * 4340 0 1446 S 55 6303 5366 * * * 5298 * * 2330 3054 * 4044 6936 3560 2895 2161 3602 5356 * * 55 0 * * * * * * 4334 0 0 T 56 * 4491 * * * 5664 * 6066 * * * * * * * 4726 179 * * * 56 0 * * * * * * 4341 0 0 I 57 * * * * * * 4676 1233 * 1247 5204 * * * 5713 * * 3880 * * 57 0 * * * * * * 4300 0 0 T 58 5204 * 4120 * * 2454 5972 5977 * 4443 * 6134 * 5412 * 2391 1229 * * * 58 0 * * * * * * 4300 0 0 S 59 2351 5149 * * 5834 4907 4872 3848 4565 6019 * * 4474 * * 1423 4770 3197 * * 59 0 * * * * * * 4300 0 0 R 60 * * 3880 3266 4676 3982 5977 * 3812 * * 5204 * 4275 899 * * * 5412 * 60 0 * * * * * * 4300 0 0 E 61 5412 * 1837 731 * * * * * * 4676 * 4791 * * * * 5713 * * 61 0 * * * * * * 4300 0 0 I 62 * * * * * * * 545 * 3140 * * * * * * * 2314 * * 62 0 * * * * * * 4300 0 0 Q 63 * * * 2729 * * * 3236 5181 * 4573 6219 * 680 * * * 4802 * * 63 0 * * * * * * 4252 0 0 T 64 2625 * 6699 5417 * 5234 7389 * * * 4715 * * 4484 * 2171 1202 4927 * * 64 0 * * * * * * 4252 0 0 A 65 308 * * 5641 * 5759 * * * * * * 7389 * * 2954 5722 * * * 65 0 * * * * * * 4252 0 0 V 66 4275 * * * 3270 * * 3696 * 4323 4697 * * * * * 5474 607 * * 66 0 * * * * * * 4199 0 0 R 67 * 5719 5297 3270 * * 3140 * 2770 * * 3528 * * 1192 * * * * 3887 67 0 * * * * * * 4199 0 0 L 68 * * * * 4210 * 5671 3548 5197 528 * * * 4493 5318 * * 4302 * * 68 0 * * * * * * 4164 0 0 L 69 * 4823 * * 5458 * 5671 4159 * 1172 4284 * * * * * 6642 1469 * * 69 0 * * * * * * 4164 0 0 L 70 * * * * 3238 * * 5392 * 295 * * * * * * 4823 5671 * * 70 0 * * * * * * 4164 0 0 P 71 5458 * * * * * * * 3442 * * * 397 4750 * * 4234 4823 * * 71 0 * * * * * * 4164 0 0 G 72 4909 * 4007 4493 * 647 4914 * 5171 * * * 4330 * 5118 3608 * * * * 72 0 * * * * * * 4164 0 0 E 73 * * 3087 586 * 5556 * * 3685 * * * * 3093 * * * * * * 73 0 * * * * * * 4143 0 0 L 74 * * * * * * * 2435 * 360 4807 * * * * * * * * * 74 0 * * * * * * 4094 0 0 A 75 928 4140 * * * 2821 * * 3624 4864 * 5214 * 4615 4758 4156 * * * * 75 0 * * * * * * 4028 0 0 K 76 * * 4313 4864 * * * * 506 * * 5969 * 5545 2993 * 5082 * 5748 * 76 0 * * * * * * 4028 0 0 H 77 * * * * * * 985 * * 2252 * 3556 * * 4658 4313 * * * 3187 77 0 * * * * * * 4028 0 0 A 78 228 4449 * * * * * 3713 * * * * * * * * * 5360 * * 78 0 * * * * * * 4028 0 0 V 79 5748 * 4864 4783 * * 4362 2376 * 4823 3401 * * * 5268 * 5116 1045 * * 79 0 * * * * * * 4028 0 0 S 80 2224 * 5268 * * * * * * 4348 * 3553 * 4362 2714 1340 5082 * * * 80 0 * * * * * * 4028 0 0 E 81 * * 4864 674 4105 * 5116 * 4121 * * * * 3229 3818 * * 5869 * * 81 0 * * * * * * 4028 0 0 G 82 3222 * * * * 338 * 4218 * * * * * * * * * 4387 * * 82 0 * * * * * * 3808 0 0 T 83 * * 3873 * * * 4387 * 4218 3750 5479 4977 * 5083 * 3010 990 4483 * * 83 0 * * * * * * 3808 0 0 K 84 * * * 3654 * * * * 755 * 4512 2839 * 5393 3865 5083 5479 * * * 84 0 * * * * * * 3808 0 0 A 85 225 * * * * * * * * * * * * * 4483 4452 4218 * * * 85 0 * * * * * * 3808 0 0 V 86 4709 * * * 4421 * * 3936 * 2275 4512 * * * * * * 739 * * 86 30 * 5603 * * * * 3808 0 0 T 87 3972 * * 4916 * * 3828 3559 5064 4683 6230 3695 * * * 1830 1928 4485 * * 87 0 * * * * 0 * 3796 0 1000 K 88 * * * * * 5756 5545 * 1209 * 5393 2595 5379 4223 2436 * 4321 * 5272 * 88 0 * * * * * * 3808 0 0 Y 89 5371 * * * 1474 * 6193 * * * 3556 * * * * * * * * 951 89 0 * * * * * * 3375 0 0 T 90 * * * 4294 * * 5243 3362 3146 5514 4106 2039 * * 5181 4715 1628 * * * 90 0 * * * * * * 3381 0 0 S 91 3598 * 4020 * 5511 * 4608 * 4793 * * * * * 5128 896 2390 * * * 91 0 * * * * * * 3460 0 0 A 92 2161 * * * * * * * * * * * * * * 365 * * * * 92 0 * * 0 * * * 2906 0 0 //