HHsearch 1.5 NAME c9mlrC_ FAM FILE c9mlrC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9mlrC_.a3m DATE Sat Nov 1 11:52:00 2025 LENG 107 match states, 107 columns in multiple alignment FILT 111 out of 261 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.6 EVD 0.4362 0.2883 SEQ >ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECHHHHHHHHHCCHHHHHHHCCEECCCCCCCCC CCHHHCC >ss_conf 9876223340263405999999996286422002238999999999999999984210032069616149999998628976888745833158984886 6532276 >Consensus xxxxxsxsxraxLxfPvsRVkrilkxxxxxxxisxxaxvxlaxalExfxxxlxexaxxxaxxxxxkxIxxxhixxAIxxdxxlxfLxxxvxixxggvxpx xxxxlxx >c9mlrC_ RAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPN IQAVLLP >UniRef50_UPI00015B431F(3-95:226) PREDICTED: similar to NC2alpha n=1 Tax=Nasonia vitripennis RepID=UPI00015B431F E=1e-10 s/c=0.72 id=19% cov=85% -----SKKKKYNARFPPGRIKKIMQTDEEVGKVAQAVPIIISRTLELFVHSLLTKTMQITSAKQAKTLSPSHMKQCILSEsrfDFLKDLVKNLPDASG-- ---------- >UniRef50_O75409(20-103:117) Huntingtin-interacting protein M n=1 Tax=Homo sapiens RepID=HYPM_HUMAN E=7e-08 s/c=0.70 id=24% cov=79% -------PSRNELQVPRSFVDRVVQDERDVQSQSSSTINTLLTLLDCLADYIMERVGLEASNNGSMRNTSQDREREVDNNREPHSAESDVT--------- ------- >UniRef50_B3SCQ2(85-172:1171) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SCQ2_TRIAD E=4e-08 s/c=0.67 id=26% cov=76% --------KRSHLSACVDKFHSVLQKDILCYKIDQQLSLYVITVADYLICNILKLTGTYIRNIKHTEIGSQDIKIAMFANNPLQELFN------------ ------- >UniRef50_Q8SQT6(2-85:95) CLASS 2 TRANSCRIPTIONAL REPRESSOR similar NCB1_yeast n=1 Tax=Encephalitozoon cuniculi RepID=Q8SQT6_ENCCU E=2e-05 s/c=0.60 id=25% cov=79% ---PKQESQKKKLTrFPISRLKRIMQLNEDIGKIGASVPVVASKAIEMFLTEIVGLTLKEARKKSSSRMSSEFIIRATESDPKFAFL------------- -------- >UniRef50_C4R186(4-90:109) Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4R186_PICPG E=1e-08 s/c=0.70 id=17% cov=70% ------------LTLPISRIKKIIKMDSDHVSCSDSATYLLGVSTELFVKSFVEVASGNAKIENRKKITYQDFSKVVRTFDNLAFL-------------- ------- >UniRef50_Q58CM8(68-164:195) Nuclear transcription factor Y subunit C-10 n=3 Tax=Arabidopsis thaliana RepID=NFYCA_ARATH E=1e-13 s/c=0.80 id=20% cov=85% ---------------PLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTLRAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRVPfgphcVTHQ GVQPPAEMIL-- >UniRef50_A8NS20(45-135:140) Histone-fold protein CHRAC subunit, putative n=1 Tax=Brugia malayi RepID=A8NS20_BRUMA E=1e-09 s/c=0.71 id=17% cov=83% ---------------PLARVRTIMQSGGEQVPISSEGLFAMTKAAELFVCKLAKESYES--NDKPKCMEYSHLADYIQDNDKLEFLHEMVPhmIRFADVM HLVQPSM-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 2446 * * * * 2800 571 * * * * * 1 0 * * * * * * 3375 0 0 A 2 2020 * * * * * * * 4791 * * 3293 * 4010 2328 1783 * 3974 * * 2 0 * * * * * * 4203 0 0 K 3 2395 * * * * * * * 858 * * 4381 * 4532 3021 * * * 4517 * 3 0 * * * * * * 4834 0 0 A 4 3522 4111 * 4545 * * * 4613 1752 3848 5103 4906 2247 * 4651 * 4225 4697 * * 4 0 * * * * * * 5458 0 0 K 5 5120 * * 2253 * * 5387 5304 2292 * 5202 * 5408 3183 4157 3931 * 2149 * * 5 0 * * * * * * 5488 0 0 S 6 4154 * * 3719 * * * 4853 4966 5000 * * 5285 5041 * 890 2519 * * * 6 0 * * * * * * 5580 0 0 R 7 * * * 3454 * 4032 5507 * 1701 * * 4891 5099 3942 1701 * 3599 * * * 7 0 * * * * * * 5361 0 0 S 8 5093 * * * * * * 4246 3445 5050 * * 3076 4938 4428 905 3963 * * * 8 0 * * * * * * 5938 0 0 S 9 2708 * 4341 5359 * * * * 3222 4799 * 4544 4444 3201 4727 1745 3601 6147 * * 9 0 * * * * * * 6121 0 0 R 10 * * * 5084 * 5034 * * 1500 4174 * * * 4841 1101 * 5067 * * * 10 0 * * * * * * 6115 0 0 A 11 1150 5865 * * * 3616 * * 4523 5242 * 3891 5303 * 4290 2242 * * * 5294 11 0 * * * * * * 6206 0 0 G 12 4575 * 5127 2309 * 1523 5037 * 3309 * * 3950 5656 6125 * 3175 4688 * * * 12 55 4752 * 1757 506 * * 6549 1529 0 L 13 5749 5728 * * * * * 3437 6247 663 4746 6110 * * * 5586 3853 3973 * 5659 13 18 6327 * 2000 415 * * 6739 1000 0 Q 14 4454 * * * 4136 6065 5853 3805 3511 4676 6583 6248 * 1973 4690 3893 2663 3004 * * 14 29 5646 * 555 1648 * * 6924 1638 0 F 15 5432 * * * 703 * * 4664 * 1892 * * * * * * * 4620 * 6275 15 0 * * * * * * 6992 0 0 P 16 5798 5699 * * * * 5231 6286 5201 * * * 365 * 5550 3573 6154 * * * 16 0 * * * * * * 7150 0 0 V 17 5865 6154 * * * * 6516 2634 6614 2273 3515 * 4439 * 5751 7185 4342 1429 * * 17 0 * * * * * * 7193 0 0 G 18 1968 6409 4965 5330 * 2237 * * 6123 * * 4483 * * * 1667 3783 5881 * * 18 0 * * * * * * 7184 0 0 R 19 * 5526 * 5738 5594 * 6587 * 2885 5493 * 6343 * 4047 549 * * * * 6120 19 0 * * * * * * 7137 0 0 V 20 5738 6372 * * 3933 * * 1432 * 4827 4577 * * * * * 5298 1216 * * 20 0 * * * * * * 7137 0 0 H 21 6345 * 4409 2798 4732 7086 3037 * 1315 * * 6998 * 6833 2540 5904 * * * 5445 21 0 * * * * * * 7137 0 0 R 22 6735 * * 5090 * * 5010 6287 1711 * * 5492 6295 5474 1190 5243 3883 7053 * 6114 22 12 6906 * 0 * * * 7137 1000 0 L 23 6959 5659 * * 5010 * 6826 1221 5939 2524 4739 * * 6262 * 5149 * 3120 3786 4409 23 14 * 6735 * * * * 7137 0 0 L 24 5127 5922 * * 5639 * * 2914 * 1511 1544 * * * * * 6236 3392 * * 24 19 * 6273 * * * 0 7120 0 1000 R 25 7023 6222 * * * 6550 5383 * 1315 5852 * 6390 * 2090 2222 6899 5238 5102 * * 25 0 * * * * 0 * 7117 0 1717 K 26 3456 * 3386 2777 5879 5425 5265 5525 2940 3914 5929 5626 * 4352 4729 2671 3855 5434 * 6621 26 59 5902 5438 0 * * * 7142 1458 0 G 27 4571 7723 1509 3213 * 2570 5793 4227 5454 5238 5262 4185 * * 4414 4355 6045 6279 * * 27 0 * * * * 0 * 7128 0 1667 H 28 5632 5475 3474 3106 * 5327 7566 4587 4070 6347 5466 3897 2863 3990 2897 3715 3856 4717 * * 28 9 7359 * 1585 585 * * 7142 1000 0 Y 29 6845 * 1725 3341 5725 5184 4408 5634 5706 3498 5939 4027 4953 7268 6860 4799 4992 4390 * 2958 29 0 * * * * * * 7142 0 0 A 30 2795 4294 5557 7140 5953 4732 4788 3521 5411 6276 5265 5522 * 4595 5236 3043 4710 1998 * 4740 30 21 6108 * 610 1536 * * 7142 1569 0 E 31 5487 5904 4962 4436 4711 2680 5342 5091 2943 4964 4510 5693 5439 4460 3020 4183 4753 4418 5270 4248 31 25 5876 * 427 1964 * * 7141 1603 0 R 32 * 4610 * * 5261 5972 6115 4657 2547 3579 3267 5092 6745 5146 1686 4258 5452 5265 6621 6026 32 0 * * * * * * 7141 0 0 V 33 5454 4183 * * 6294 * * 1513 * 2878 4612 * 6916 5639 * 5271 4336 1844 * * 33 0 * * * * * * 7152 0 0 G 34 3740 * 4070 * * 2840 4929 * 4802 * 6824 4175 * 6045 * 995 4354 6565 * 5912 34 11 * 7067 * * * * 7282 0 0 A 35 2498 7037 3677 4600 * 5259 6322 5666 4101 * 6952 3711 6024 2555 5537 2070 5826 4965 * * 35 0 * * * * 0 * 7276 0 1000 G 36 3080 * 2605 2405 * 3954 5236 * * 6357 6468 3954 5573 4780 * 2547 3688 5719 * 5358 36 0 * * * * * * 7282 0 0 A 37 837 6230 * * * 5840 * * * 5893 * * * 5440 * 4175 2498 2865 * * 37 0 * * * * * * 7282 0 0 P 38 3351 6495 * * 5491 6611 * 4372 * 2759 6784 6227 1386 * * 2994 5397 3378 * 6398 38 0 * * * * * * 7279 0 0 V 39 3542 * 6112 6221 3061 * 5896 2777 5439 3442 6996 5631 5738 7047 * 7062 5122 1522 * 4325 39 0 * * * * * * 7279 0 0 Y 40 3214 6688 * * 2712 * * 4212 * 2054 6419 * 7062 * * 5412 4134 3880 * 1902 40 0 * * * * * * 7279 0 0 L 41 4244 * * * 4193 * * 2526 * 1363 3280 * * * * 4946 4360 2775 * * 41 0 * * * * * * 7279 0 0 A 42 1347 5359 * * * 3400 * 5889 * 4851 * 4116 * * * 2580 2498 4864 * * 42 0 * * * * * * 7279 0 0 A 43 1385 * 5213 6046 4541 4990 * 6608 1923 4700 * 6372 * 6268 3276 * 4754 5451 * * 43 0 * * * * * * 7279 0 0 V 44 1281 4726 * * 6581 5356 * 3996 * 3690 4944 * 6045 * * 4077 4500 2155 * * 44 0 * * * * * * 7273 0 0 L 45 3034 3123 * * * * * 3958 * 1272 4523 * * * * 5216 2500 4741 * * 45 36 * 5356 * * * * 7273 0 0 E 46 * * 4223 317 * * * * 5309 * 6639 5785 * 4299 * * * 6029 * 5353 46 0 * * * * * 0 7165 0 1000 Y 47 5687 5606 6361 6741 3873 * 6562 3788 4952 1671 4193 4964 * 6235 * 6664 * * 6281 1652 47 0 * * * * * 0 7181 0 1000 L 48 * * * * 918 * * 3896 * 1613 6214 * * * * * * 3981 * * 48 0 * * * * 0 * 7181 0 1000 T 49 3416 6142 * 5320 * * * 2139 * 2520 6194 * * * * 4501 2304 2284 * * 49 0 * * * * * * 7279 0 0 A 50 2742 4855 4119 2663 * 4565 5082 6194 4014 4943 7321 5320 5728 2797 4263 3061 5331 5741 * 6476 50 0 * * * * * * 7279 0 0 E 51 6604 * 3142 1546 6779 * 4941 * 3608 3715 6381 4018 * 3955 5605 3718 6446 * * 3507 51 0 * * * * * * 7279 0 0 I 52 5714 * * * 3293 * * 2265 * 1010 5594 * * * * * 4734 3107 * * 52 12 * 6958 * * * * 7279 0 0 L 53 3119 5118 5467 5310 4692 5837 * 4206 * 1808 4151 7217 * * * 3706 2787 3075 6765 * 53 0 * * * * * 0 7267 0 1000 E 54 5675 7230 4022 1361 5562 3814 * 5663 3153 4776 * 4856 * 4286 5056 4945 3616 6108 * 5837 54 0 * * * * * 0 7286 0 1000 L 55 4271 5117 5111 2895 * 4491 6108 4688 3615 2316 3559 6901 * 4054 2739 6209 5163 5336 * 7311 55 0 * * * * * 0 7286 0 1000 A 56 967 6377 * * * 4747 * 6008 5509 5297 5789 * * 5487 * 2515 3149 4377 * * 56 33 6307 6663 2322 322 * 0 7226 1000 1000 G 57 3693 4271 5664 * 4589 1975 4864 5278 5345 3836 6326 5405 * * * 4543 6858 3791 3227 2902 57 0 * * * * * 0 7279 0 1502 N 58 3888 * 4244 3037 * 6715 5914 5473 3001 4019 5146 2377 * 3498 4780 3970 3705 5405 * 6276 58 0 * * * * 621 1515 7221 0 1502 A 59 3733 3695 5565 3028 5663 6489 4882 3716 * 4760 5286 4284 5494 4057 5576 3982 4656 2752 * 3403 59 14 * 6696 * * * 0 7262 0 1000 A 60 1206 6398 * 6628 * * * 5850 6290 4003 5570 * 4701 * 4078 3807 2414 4265 * 5494 60 0 * * * * * 0 7253 0 1535 R 61 4805 * 4245 3352 4977 6840 4472 5363 2536 5872 6280 4727 5308 3084 2886 3249 7194 3774 * * 61 14 6693 * 2585 263 678 1415 7252 1000 1535 D 62 4266 * 3462 3046 6518 4673 6535 4511 3237 4053 4838 3178 * 3917 4663 2968 4942 5749 * 4831 62 0 * * * * * 0 7261 0 1000 N 63 4697 6184 2787 4444 * 4815 3175 4069 3534 5105 6013 2875 5390 4288 3769 3236 5258 * * 8294 63 0 * * * * * 0 7261 0 1000 K 64 6464 * 4875 * * 2939 6455 * 1598 5390 * 2640 * 5227 2830 3693 4228 * * * 64 43 5077 * 644 1474 * 0 7261 2101 1000 K 65 4676 6016 5520 5319 * 6691 4065 * 2663 4380 6549 * 5078 3763 1582 3105 4840 5373 * * 65 81 4784 5758 651 1462 * 0 7319 1649 1000 T 66 5407 5717 * 5736 * 4661 * 6134 1202 * 4516 4967 * 4872 2702 3855 4327 4466 * 5474 66 25 5851 * 1275 769 * 0 7587 1742 1344 R 67 5300 4556 * 3751 5651 6772 * 4971 3747 4658 5676 5161 * 6653 2176 3859 1867 5227 * 4863 67 15 6620 * 0 * 621 1515 7587 1000 1344 I 68 6466 * * * 6420 * * 869 * 1931 5554 5597 * * * * * 2994 * * 68 0 * * * * * 0 7319 0 1000 I 69 4113 * 6591 5964 * 5866 5787 4915 3666 4528 6249 3768 * 2686 4649 2879 1881 4796 * * 69 0 * * * * * 0 7679 0 1000 P 70 3768 * * 6546 * 4783 * * 3244 4955 * 6129 1446 4877 4101 4081 6709 * * 2326 70 0 * * * * * 0 7645 0 1000 R 71 4287 4866 4166 2753 * 6621 6497 6234 2782 6971 * 5357 6173 2787 2518 3576 4722 5058 6252 * 71 0 * * * * * 0 7588 0 1000 H 72 * * 1364 * 5199 * 1299 5804 5218 4306 6659 6470 * 5567 * * 5724 5553 * * 72 0 * * * * * 0 7588 0 1000 L 73 * 5218 * * 4951 * * 1580 5567 1482 5014 * * 6252 5363 * * 2654 * * 73 40 * 5202 * * * 0 7588 0 1000 Q 74 3054 6500 3872 3057 5621 7672 4346 5557 2641 5498 5323 5036 * 4324 4705 2440 4038 6250 * * 74 0 * * * * 672 1426 7464 0 1361 L 75 4291 5175 5280 3585 * 5909 5258 5177 3218 2869 5057 5276 * 3284 3674 2947 4137 4940 6893 4921 75 0 * * * * 0 * 7607 0 1000 A 76 823 4050 * 4768 * 4607 6169 * * * * * 5507 * * 3642 4573 2984 * 6352 76 0 * * * * * * 7626 0 0 I 77 6717 * * * 6307 5185 * 1176 * 5115 4565 6309 6751 * * 6294 4941 1437 * * 77 0 * * * * * * 7626 0 0 R 78 2863 4116 4229 4385 5280 5015 5516 6846 3297 4071 * 3500 * 3417 2534 4508 6409 6299 * 4960 78 0 * * * * * * 7441 0 0 N 79 3575 6401 5595 5859 * 5020 5545 * 2966 * 4824 1836 5216 4404 4175 2932 3355 6321 * * 79 18 * 6351 * * * * 7421 0 0 D 80 * * 1370 4301 6152 * 4205 5428 5559 * 6260 2145 * 5563 6570 3625 3572 6801 * 7695 80 13 6770 * 1585 585 0 * 7398 1000 1000 E 81 3994 * 2353 2322 * 4442 * 5423 3385 5108 6182 4180 2900 4959 4230 6741 5837 4953 * * 81 0 * * * * * * 7235 0 0 E 82 6641 * 4307 1738 4701 5542 5649 4811 3710 5620 6016 4399 4573 3672 3821 4811 4777 3614 * 5661 82 0 * * * * * * 7235 0 0 L 83 * * * * 1934 * 6873 * * 829 5581 * 5051 * * * 5576 5862 * 3686 83 0 * * * * * * 7231 0 0 N 84 3566 5364 1889 3073 * * 3170 * 4737 5083 5156 3515 * 5389 5383 3294 6128 * 4484 * 84 0 * * * * * * 7155 0 0 K 85 6020 * 3806 5098 1059 4689 6008 * 5270 6546 * 6451 6862 3224 6016 3259 5211 * 5307 6180 85 0 * * * * * * 7163 0 0 L 86 5037 * * * 5228 * * 5385 * 265 4191 * * * * * * 4959 * * 86 51 5608 6146 1585 585 * * 7162 1000 0 L 87 4776 * * 4319 1939 5631 5604 2688 * 1975 * 6412 * * 4209 4947 * 3669 * 5290 87 0 * * * * * 0 6742 0 1000 G 88 5003 * 2562 4628 * 3559 4099 * 1780 * * 3002 * 3686 4496 4126 5602 * * * 88 107 4191 5902 2024 407 * 0 6717 1585 1000 G 89 3966 * 2416 * 5351 2699 4125 3868 4645 4932 4451 3362 * 5026 5953 3562 4058 4750 * * 89 50 * 4888 * * * 0 6596 0 1775 V 90 * * * * * 3410 4833 2990 * 3968 * * * * * * 3401 842 5144 * 90 31 * 5556 * * 1031 969 6388 0 2477 T 91 5226 4209 * * * * 4570 3046 * 5062 * * 1966 * 4575 4682 1601 4071 * * 91 123 4088 5441 1689 536 * 0 6334 1679 2265 I 92 * 5169 4857 * * 4785 * 799 3854 3671 * * * * 4688 5538 * 3075 * * 92 0 * * * * 2292 329 6169 0 2537 A 93 1728 5209 5065 4730 * * 3865 * 4733 * * * 2952 4496 3938 2729 3217 * * * 93 56 * 4708 * * 1495 632 6143 0 2265 Q 94 4807 * * 3416 4541 3142 4334 * * * * 3709 5571 1781 4905 2041 * * * * 94 70 4404 * 1000 1000 1462 651 6071 1000 1889 G 95 3726 * * * * 339 * * * * * 4806 * 4498 * 4221 * * * * 95 0 * * * * * 0 5367 0 1408 G 96 3512 * 3506 * * 572 * * * * * * * 4069 4411 4473 * * * * 96 149 3350 * 1574 591 * 0 5235 1634 1408 V 97 3165 * * * * 4909 * * * * 4241 4399 * * 4732 * 3263 706 * * 97 0 * * * * 934 1070 5021 0 1408 L 98 * * * * * * * 2304 3474 1641 4087 * 5031 3178 * * 4984 2686 * * 98 0 * * * * 0 * 5185 0 1000 P 99 * * * * * * 4160 * 5085 * * * 326 * * 3096 * * * * 99 49 4890 * 0 * * * 5281 1000 0 N 100 * 5094 * 4415 4977 * 3074 4624 2662 3998 * 4102 3540 * 2369 4829 * * * 2843 100 0 * * * * * * 5076 0 0 I 101 4007 * * * * * * 807 4117 4410 * * 4710 * * 4110 3396 3830 * * 101 0 * * * * * * 4739 0 0 Q 102 3893 * * 3793 * * 1081 * 4625 3939 * 4335 * 2363 4709 * * * * * 102 0 * * * * * * 4593 0 0 A 103 5244 * * 3539 * * * * 2351 * 3690 * 1015 * 3916 4235 * * * * 103 0 * * * * * * 4474 0 0 V 104 3360 * * 2303 * * * 2207 * * * * * * * 1586 * 2735 * * 104 0 * * * * * * 4296 0 0 L 105 * * * * * * * 4028 * 300 2982 * * * * * * * * * 105 0 * * * * * * 3807 0 0 L 106 * * * * * * * * * 0 * * * * * * * * * * 106 0 * * * * * * 2567 0 0 P 107 * * * * * * * * * * * * 0 * * * * * * * 107 0 * * 0 * * * 1367 0 0 //