HHsearch 1.5 NAME c9m4fA_ FAM FILE c9m4fA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9m4fA_.a3m DATE Sat Aug 30 11:49:53 2025 LENG 176 match states, 176 columns in multiple alignment FILT 4 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.8 EVD 0.4222 0.3195 SEQ >ss_pred CHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHCCEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHH HHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >ss_conf 9137889999854876775067862341000570156999999999876425778885572303532202214688764443135440007999999998 7357766772011712167587530242001744202444134699999999854641686078999887677409 >Consensus xxfxxAxexxxxxxPxfxxxGwGxtxxAErWNGRHaMFGwxxxxxtxYxkghGLiPDpxxxLdlxqWGxlxxxxxxxxIsneRAiiLvAxvHxlfxSlxA axaPxxFqDxLxxxxgxxxxxxaGlxPxxxxGLTxeAEixNGRlAMlGlvxlxxxaxxtgtxxldvvnxxxGxxlx >c9m4fA_ SVFTDATEAFSKDYPDFYKAGWGPTTKAERWNGRHAMFGWVLIVATGYAKAHGLIPDPEVALNLKEWGTLSILAGPQTISNERAVVLIANVHALFMSLCA AFAPLSFQDPLLIPKGQKDEPAAGLIPAIVPGLTKEAELLNGRLAMLGLVLVMGHSLATGTPFLNSVDLFLGNRLG >UniRef50_Q5K264(19-188:189) Putative low molecular mass early light-inducible protein HV60 (Fragment) n=1 Tax=Guillardia theta RepID=Q5K264_GUITH E=3e-38 s/c=0.94 id=49% cov=97% -----AVEKFASENPELASRGLGVTTNAERWNGRHAMFGIFFMVLSSYLHGRGLIPDGDKILDVSQWGPLVNGGFNAPITNERAIILVAHVHVLFVSILA AFAPFGFQDTLVKDQGYKPEAPAGLIPPFKTGLTAEAELINGRLAMLGVISITTAALFTGTSVTDVINLGLGKIL- >UniRef50_Q7XZ09(8-180:181) Low molecular mass early light-inducible protein HV60 n=2 Tax=Griffithsia japonica RepID=Q7XZ09_GRIJA E=1e-72 s/c=1.58 id=49% cov=99% --FVKAMEDYKADFPSFAERGWGATVKAERWNGRHVMFGWLVFWITAYCKGHGLLPDPSVLLDLSQWGPVASLGDSTPISQQRAIVLVAHIHVLFVSIAA AIAPFSFQDKLLLEPGEADDAPAGLFPPMAPGLTKDAEIWNGRVAMVGLICLVAQAVGTKTPILDVVNMWFGSLF- >UniRef50_B7FNY6(42-220:224) Early light induced protein n=3 Tax=root RepID=B7FNY6_PHATR E=3e-71 s/c=1.50 id=50% cov=98% -LYDDAVSDWEKQFPAFSKWGWGPSVQAEKWNGRHAMFGWFFICATAYCKGHGLIPDPEMLLDLKQWGTLATISGKDTISNERAIILVANAHFFALSLAA TICPLPFGDSLFVDPnhpnyeamAERNKNGFGYLPALKFGLTEEAEIINGRLAMLGLVMLIGATATSGQNMLDIVNEWVG---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 0 * * * * 1 0 * * * * * * 1000 0 0 V 2 * * * * * * * * * 1000 * * * * * * * 1000 * * 2 0 * * * * * * 1411 0 0 F 3 * * * * 588 * * * * * * * * * * * * * * 1579 3 0 * * * * * * 1674 0 0 T 4 * * 1579 * * * * * * * * * * * * * 1604 1572 * * 4 0 * * * * * * 1674 0 0 D 5 * * 591 * * * * * 1572 * * * * * * * * * * * 5 0 * * * * * * 1674 0 0 A 6 0 * * * * * * * * * * * * * * * * * * * 6 0 * * * * * * 1867 0 0 T 7 * * * * * * * * * * 2032 * * * * * 2038 966 * * 7 0 * * * * * * 1867 0 0 E 8 * * * 428 * * * * * * * * * * * 1963 * * * * 8 0 * * * * * * 1867 0 0 A 9 2038 * 997 * * * * * 1969 * * * * * * * * * * * 9 0 * * * * * * 1867 0 0 F 10 * * * * 1003 * * * * * * * * * * * * * 1963 2032 10 0 * * * * * * 1867 0 0 S 11 1969 * * 1963 * * * * 2032 * * * * * * 2038 * * * * 11 0 * * * * * * 1867 0 0 K 12 2032 * * * * * * * 1000 * * * * * * 1969 * * * * 12 0 * * * * * * 1867 0 0 D 13 * * 1035 1969 * * * * * * * * * 1963 * * * * * * 13 0 * * * * * * 1867 0 0 Y 14 * * * * 997 * * * * * * 1969 * * * * * * * 2038 14 0 * * * * * * 1867 0 0 P 15 * * * * * * * * * * * * 0 * * * * * * * 15 0 * * * * * * 1867 0 0 D 16 1963 * 2038 1969 * * * * * * * * * * * 2032 * * * * 16 0 * * * * * * 1867 0 0 F 17 * * * * 426 * * * * 1969 * * * * * * * * * * 17 0 * * * * * * 1867 0 0 Y 18 1000 * * * * * * * * * * * * * * 1963 * * * 2038 18 0 * * * * * * 1867 0 0 K 19 * * * 2032 * * * * 1000 * * * * * * 1969 * * * * 19 0 * * * * * * 1867 0 0 A 20 2038 * * * * * * * * * * * * * 1000 * * * 1963 * 20 0 * * * * * * 1867 0 0 G 21 * * * * * 0 * * * * * * * * * * * * * * 21 0 * * * * * * 1867 0 0 W 22 * * * * * * * * * 1969 * * * * * * * * 426 * 22 0 * * * * * * 1867 0 0 G 23 * * * * * 0 * * * * * * * * * * * * * * 23 0 * * * * * * 1867 0 0 P 24 2032 * * * * * * * * * * * 1000 * * * * 1969 * * 24 0 * * * * * * 1867 0 0 T 25 * * * * * * * * * * * * * * * 1963 428 * * * 25 0 * * * * * * 1867 0 0 T 26 * * * * * * * * * * * * * * * * 1003 997 * * 26 0 * * * * * * 1867 0 0 K 27 * * * * * * * * 1035 * * 1969 * 1963 * * * * * * 27 0 * * * * * * 1867 0 0 A 28 0 * * * * * * * * * * * * * * * * * * * 28 0 * * * * * * 1867 0 0 E 29 * * * 0 * * * * * * * * * * * * * * * * 29 0 * * * * * * 1867 0 0 R 30 * * * * * * * * 1963 * * * * * 428 * * * * * 30 0 * * * * * * 1867 0 0 W 31 * * * * * * * * * * * * * * * * * * 0 * 31 0 * * * * * * 1867 0 0 N 32 * * * * * * * * * * * 0 * * * * * * * * 32 0 * * * * * * 1867 0 0 G 33 * * * * * 0 * * * * * * * * * * * * * * 33 0 * * * * * * 1867 0 0 R 34 * * * * * * * * * * * * * * 0 * * * * * 34 0 * * * * * * 1867 0 0 H 35 * * * * * * 0 * * * * * * * * * * * * * 35 0 * * * * * * 1867 0 0 A 36 405 * * * * * * * * * * * * * * * * 2032 * * 36 0 * * * * * * 1867 0 0 M 37 * * * * * * * * * * 0 * * * * * * * * * 37 0 * * * * * * 1867 0 0 F 38 * * * * 0 * * * * * * * * * * * * * * * 38 0 * * * * * * 1867 0 0 G 39 * * * * * 0 * * * * * * * * * * * * * * 39 0 * * * * * * 1867 0 0 W 40 * * * * * * * 1969 * * * * * * * * * * 426 * 40 0 * * * * * * 1867 0 0 V 41 * * * * 966 * * * * 2032 * * * * * * * 2038 * * 41 0 * * * * * * 1867 0 0 L 42 * * * * 966 * * * * 2038 * * * * * * * 2032 * * 42 0 * * * * * * 1867 0 0 I 43 * * * * 2032 * * 1000 * * 1969 * * * * * * * * * 43 0 * * * * * * 1867 0 0 V 44 * 1963 * * * * * * * * * * * * * * * 1003 2032 * 44 0 * * * * * * 1867 0 0 A 45 1000 * * * * * * 2032 * 1969 * * * * * * * * * * 45 0 * * * * * * 1867 0 0 T 46 * * * * * * * * * * * * * * * 1969 426 * * * 46 0 * * * * * * 1867 0 0 G 47 997 * * * * 2038 * * * * * * * * * 1969 * * * * 47 0 * * * * * * 1867 0 0 Y 48 * * * * * * * * * * * * * * * * * * * 0 48 0 * * * * * * 1867 0 0 A 49 2038 997 * * * * * * * 1969 * * * * * * * * * * 49 0 * * * * * * 1867 0 0 K 50 * * * * * * 1969 * 426 * * * * * * * * * * * 50 0 * * * * * * 1867 0 0 A 51 2038 * * * * 403 * * * * * * * * * * * * * * 51 0 * * * * * * 1867 0 0 H 52 * * * * * * 426 * * * * * * * 1969 * * * * * 52 0 * * * * * * 1867 0 0 G 53 * * * * * 0 * * * * * * * * * * * * * * 53 0 * * * * * * 1867 0 0 L 54 * * * * * * * * * 0 * * * * * * * * * * 54 0 * * * * * * 1867 0 0 I 55 * * * * * * * 405 * 2032 * * * * * * * * * * 55 0 * * * * * * 1867 0 0 P 56 * * * * * * * * * * * * 0 * * * * * * * 56 0 * * * * * * 1867 0 0 D 57 * * 0 * * * * * * * * * * * * * * * * * 57 0 * * * * * * 1867 0 0 P 58 * * * * * 1969 * * * * * * 426 * * * * * * * 58 0 * * * * * * 1867 0 0 E 59 * * 1969 1000 * * * * * * * * * * * 2032 * * * * 59 0 * * * * * * 1867 0 0 V 60 * * * * * * * * 1969 * 1963 * * * * * * 1035 * * 60 0 * * * * * * 1867 0 0 A 61 2038 * * * * * * 1969 * 997 * * * * * * * * * * 61 0 * * * * * * 1867 0 0 L 62 * * * * * * * * * 0 * * * * * * * * * * 62 0 * * * * * * 1867 0 0 N 63 * * 403 * * * * * * * * 2038 * * * * * * * * 63 0 * * * * * * 1867 0 0 L 64 * * * * * * * * * 426 * * * * * * * 1969 * * 64 0 * * * * * * 1867 0 0 K 65 * * * * * * * * 1000 * * * * * * 1000 * * * * 65 0 * * * * * * 1867 0 0 E 66 * * * 2038 * * * * * * * * * 403 * * * * * * 66 0 * * * * * * 1867 0 0 W 67 * * * * * * * * * * * * * * * * * * 0 * 67 0 * * * * * * 1867 0 0 G 68 * * * * * 0 * * * * * * * * * * * * * * 68 0 * * * * * * 1867 0 0 T 69 * * * * * * * * * * * * 1000 * * * 1000 * * * 69 0 * * * * * * 1867 0 0 L 70 * * * * * * * * * 405 * * * * * * * 2032 * * 70 0 * * * * * * 1867 0 0 S 71 997 * * * * * * * * * * * * * * 2038 * 1969 * * 71 0 * * * * * * 1867 0 0 I 72 * * * * * * * 2038 * * * 1969 * * * 2032 1963 * * * 72 0 * * * * * * 1867 0 0 L 73 * * * * * 1969 * 1963 * 1035 * * * * * * * * * * 73 0 * * * * * * 1867 0 0 A 74 2038 * * * * 1000 * * * * * * * * * 1963 * * * * 74 0 * * * * * * 1867 0 0 G 75 * * 2032 * 1969 1000 * * * * * * * * * * * * * * 75 0 * * * * * * 1867 0 0 P 76 * * * * * * * * 1963 * * 1969 2038 * * 2032 * * * * 76 0 * * * * * * 1867 0 0 Q 77 1969 * 1963 * * * * * * * * * * 2038 * * 2032 * * * 77 0 * * * * * * 1867 0 0 T 78 * * * * * * * * * * * * 1000 * * * 1000 * * * 78 0 * * * * * * 1867 0 0 I 79 * * * * * * * 0 * * * * * * * * * * * * 79 0 * * * * * * 1867 0 0 S 80 * * * * * * * * * * * * * * * 426 1969 * * * 80 0 * * * * * * 1867 0 0 N 81 * * * * * * * * * * * 405 * 2032 * * * * * * 81 0 * * * * * * 1867 0 0 E 82 * * * 405 * * * * * * * * * 2032 * * * * * * 82 0 * * * * * * 1867 0 0 R 83 * * * * * * * * * * * * * * 0 * * * * * 83 0 * * * * * * 1867 0 0 A 84 0 * * * * * * * * * * * * * * * * * * * 84 0 * * * * * * 1867 0 0 V 85 * * * * * * * 403 * * * * * * * * * 2038 * * 85 0 * * * * * * 1867 0 0 V 86 * * * * * * * 966 * * * * * * * * * 1035 * * 86 0 * * * * * * 1867 0 0 L 87 * * * * * * * * * 0 * * * * * * * * * * 87 0 * * * * * * 1867 0 0 I 88 * * * * * * * 2038 * * * * * * * * * 403 * * 88 0 * * * * * * 1867 0 0 A 89 0 * * * * * * * * * * * * * * * * * * * 89 0 * * * * * * 1867 0 0 N 90 * * * * * * 1000 * * * * 1000 * * * * * * * * 90 0 * * * * * * 1867 0 0 V 91 1963 * * * * * * 2032 * * * * * * * * * 1003 * * 91 0 * * * * * * 1867 0 0 H 92 * * * * * * 0 * * * * * * * * * * * * * 92 0 * * * * * * 1867 0 0 A 93 2038 * * * 1963 * * * * * * * * * * * * 1000 * * 93 0 * * * * * * 1867 0 0 L 94 * * * * 1963 * * * * 428 * * * * * * * * * * 94 0 * * * * * * 1867 0 0 F 95 1963 * * * 428 * * * * * * * * * * * * * * * 95 0 * * * * * * 1867 0 0 M 96 * * * * * * * * * 1963 2038 * * * * * * 1000 * * 96 0 * * * * * * 1867 0 0 S 97 * * * * * * * * * * * * * * * 0 * * * * 97 0 * * * * * * 1867 0 0 L 98 * * * * * * * 1000 * 1000 * * * * * * * * * * 98 0 * * * * * * 1867 0 0 C 99 997 2038 * * * * * * * 1969 * * * * * * * * * * 99 0 * * * * * * 1867 0 0 A 100 0 * * * * * * * * * * * * * * * * * * * 100 0 * * * * * * 1867 0 0 A 101 428 * * * * * * * * * * * * * * * 1963 * * * 101 0 * * * * * * 1867 0 0 F 102 * * * * 1003 * * 997 * * * * * * * * * * * * 102 0 * * * * * * 1867 0 0 A 103 428 1963 * * * * * * * * * * * * * * * * * * 103 0 * * * * * * 1867 0 0 P 104 * * * * * * * * * * * * 0 * * * * * * * 104 0 * * * * * * 1867 0 0 L 105 * * * * 1000 * * * * 1000 * * * * * * * * * * 105 0 * * * * * * 1867 0 0 S 106 * * * * * 1969 * * * * * * 1963 * * 1035 * * * * 106 0 * * * * * * 1867 0 0 F 107 * * * * 0 * * * * * * * * * * * * * * * 107 0 * * * * * * 1867 0 0 Q 108 * * * * * 1963 * * * * * * * 428 * * * * * * 108 0 * * * * * * 1867 0 0 D 109 * * 0 * * * * * * * * * * * * * * * * * 109 0 * * * * * * 1867 0 0 P 110 * * * * * * * * 2032 * * * 2038 * * 1963 1969 * * * 110 0 * * * * * * 1867 0 0 L 111 * * * * * * * * * 0 * * * * * * * * * * 111 0 * * * * * * 1867 0 0 L 112 * * * * 1963 * * * * 1035 * * * * * * * 1969 * * 112 0 * * * * * * 1867 0 0 I 113 * * * * * * * 2038 1969 2032 * * * * * * * 1963 * * 113 0 * * * * * * 1867 0 0 P 114 * * 966 2032 * * * * * * * * 2038 * * * * * * * 114 0 * * * * * * 1867 0 0 K 115 * * * * * * * * 2038 * * * 997 1969 * * * * * * 115 428 1963 * 3000 193 * * 1867 1000 0 G 116 1963 * * * * 428 * * * * * * * * * * * * * * 116 0 * * * * * * 1867 0 0 Q 117 * * * 997 * * * * * * * * * 2038 * * * * * 1969 117 0 * * * * * * 1867 0 0 K 118 2032 * * * * * * * 1003 * * * * * 1963 * * * * * 118 0 * * * * * * 1867 0 0 D 119 * * 1035 * * * * * * * * 1963 1969 * * * * * * * 119 0 * * * * * * 1867 0 0 E 120 * * 2032 1003 * * * * 1963 * * * * * * * * * * * 120 0 * * * * * * 1867 0 0 P 121 1000 * * * * * * * * * * 1963 2038 * * * * * * * 121 0 * * * * * * 1867 0 0 A 122 2038 * * * * 1963 * * * * * * 1000 * * * * * * * 122 0 * * * * * * 1867 0 0 A 123 428 * * * 1963 * * * * * * * * * * * * * * * 123 0 * * * * * * 1867 0 0 G 124 * * * * * 0 * * * * * * * * * * * * * * 124 0 * * * * * * 1867 0 0 L 125 * * * * * * * * * 428 * * * * * * * * * 1963 125 0 * * * * * * 1867 0 0 I 126 * * * * 2032 * * 1003 * 1963 * * * * * * * * * * 126 0 * * * * * * 1867 0 0 P 127 * * * * * * * * * * * * 0 * * * * * * * 127 0 * * * * * * 1867 0 0 A 128 1000 * * * * * * * * * * * 1000 * * * * * * * 128 0 * * * * * * 1867 0 0 I 129 * * * * 1969 * * 2038 * 1963 2032 * * * * * * * * * 129 0 * * * * * * 1867 0 0 V 130 2032 * * * * * * * 966 * * * * * * * * 2038 * * 130 0 * * * * * * 1867 0 0 P 131 * * * * 1963 * * * * * * * 1035 * * * 1969 * * * 131 0 * * * * * * 1867 0 0 G 132 * * * * * 0 * * * * * * * * * * * * * * 132 0 * * * * * * 1867 0 0 L 133 * * * * * * * * * 0 * * * * * * * * * * 133 0 * * * * * * 1867 0 0 T 134 * * * * * * * * * * * * * * * * 0 * * * 134 0 * * * * * * 1867 0 0 K 135 1969 * * 1963 * * * * 1035 * * * * * * * * * * * 135 0 * * * * * * 1867 0 0 E 136 * * 2032 405 * * * * * * * * * * * * * * * * 136 0 * * * * * * 1867 0 0 A 137 0 * * * * * * * * * * * * * * * * * * * 137 0 * * * * * * 1867 0 0 E 138 * * * 0 * * * * * * * * * * * * * * * * 138 0 * * * * * * 1867 0 0 L 139 * * * * * * * 997 * 1003 * * * * * * * * * * 139 0 * * * * * * 1867 0 0 L 140 * * * * * * * 966 * 2038 * * * * * * * * 2032 * 140 0 * * * * * * 1867 0 0 N 141 * * * * * * * * * * * 0 * * * * * * * * 141 0 * * * * * * 1867 0 0 G 142 * * * * * 0 * * * * * * * * * * * * * * 142 0 * * * * * * 1867 0 0 R 143 * * * * * * * * * * * * * * 0 * * * * * 143 0 * * * * * * 1867 0 0 L 144 * * * * * * * * * 405 * * * * * * * 2032 * * 144 0 * * * * * * 1867 0 0 A 145 0 * * * * * * * * * * * * * * * * * * * 145 0 * * * * * * 1867 0 0 M 146 * * * * * * * * * * 0 * * * * * * * * * 146 0 * * * * * * 1867 0 0 L 147 * * * * * * * * * 405 * * * * * * * 2032 * * 147 0 * * * * * * 1867 0 0 G 148 * * * * * 0 * * * * * * * * * * * * * * 148 0 * * * * * * 1867 0 0 L 149 * * * * * * * * * 426 * * * * * * * 1969 * * 149 0 * * * * * * 1867 0 0 V 150 * * * * * * * 1000 * * * * * * * * * 1000 * * 150 0 * * * * * * 1867 0 0 L 151 * 2032 * * * * * * * 2038 1963 * * * * 1969 * * * * 151 0 * * * * * * 1867 0 0 V 152 * * * * * * * 1969 * 997 * * * * * * * 2038 * * 152 0 * * * * * * 1867 0 0 M 153 * * * * * * * 1963 * * 2038 * * * * * 1969 2032 * * 153 0 * * * * * * 1867 0 0 G 154 2032 * * * * 1000 * * * * * * * * * * 1969 * * * 154 0 * * * * * * 1867 0 0 H 155 966 * * * * * 2038 * * * * * * 2032 * * * * * * 155 0 * * * * * * 1867 0 0 S 156 1000 * * * * * * * * * * * * * * 2038 1963 * * * 156 0 * * * * * * 1867 0 0 L 157 1963 * * * * * * * * 1003 * * * * * * * 2032 * * 157 0 * * * * * * 1867 0 0 A 158 2038 * * * 1969 2032 * * * * * * * * * * 1963 * * * 158 0 * * * * * * 1867 0 0 T 159 * * * * * * * * * * * * * * * 1963 428 * * * 159 0 * * * * * * 1867 0 0 G 160 * * * * * 405 * * 2032 * * * * * * * * * * * 160 0 * * * * * * 1867 0 0 T 161 * * * * * * * * * * * * * 1963 * * 428 * * * 161 0 * * * * * * 1867 0 0 P 162 * * * * * * * * * * * 1963 1035 * * 1969 * * * * 162 0 * * * * * * 1867 0 0 F 163 * * * * 2038 * * 2032 * * 1963 * * * * * * 1969 * * 163 0 * * * * * * 1867 0 0 L 164 * * * * * * * * * 426 * * * * * * 1969 * * * 164 0 * * * * * * 1867 0 0 N 165 * * 403 * * * * * * * * 2038 * * * * * * * * 165 0 * * * * * * 1867 0 0 S 166 * * * * * * * 1963 * * * * * * * 2038 * 1000 * * 166 0 * * * * * * 1867 0 0 V 167 * * * * * * * 1969 * * * * * * * * * 426 * * 167 0 * * * * * * 1867 0 0 D 168 * * 2038 * * * * * * * * 403 * * * * * * * * 168 0 * * * * * * 1867 0 0 L 169 * * * 1963 * * * * * 1003 2032 * * * * * * * * * 169 0 * * * * * * 1867 0 0 F 170 * * * * 2038 1969 * * * * * * * * * * * * 997 * 170 0 * * * * * * 1867 0 0 L 171 * * * * 2032 * * * * 1003 * * * * * * * 1963 * * 171 0 * * * * * * 1867 0 0 G 172 * * * * * 0 * * * * * * * * * * * * * * 172 0 * * * * * * 1867 0 0 N 173 * * * * * * * * 1585 * * 1579 * * * 1591 * * * * 173 0 * * * * * * 1677 0 0 R 174 * * * * * * * 1585 * 1591 * * * * 1579 * * * * * 174 0 * * * * * * 1677 0 0 L 175 * * * * 1591 * * * * 582 * * * * * * * * * * 175 0 * * * * * * 1677 0 0 G 176 * * * * * 0 * * * * * * * * * * * * * * 176 0 * * 0 * * * 1000 0 0 //