HHsearch 1.5 NAME c9ll4A_ FAM FILE c9ll4A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9ll4A_.a3m DATE Sat Nov 22 10:16:07 2025 LENG 106 match states, 106 columns in multiple alignment FILT 22 out of 24 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.9 EVD 0.4241 -0.3307 SEQ >ss_pred CCCCEECCCCEEEEEEECCCCCCCCEEEEEEEECCCEECCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCEEEE EEEEEC >ss_conf 9310001362499999438863462599999934981546642999996047889986553113140698389999842685179999997899748887 764309 >Consensus xxxxxxxxxxxxVxxxsxxxpxxGxntxvixitdxGxpixxaxVxixfxMpxMpxMpxmxxxaxxxxxxGxYxaxxxlxMxGxWqvxvxVxxxxGxxxxx kxsxnx >c9ll4A_ PWEQTLKANDLEVKIKSVGNPIKGDNTFVLSPTLKGKALEKAIVRVQFMMPEMPGMPAMKEMAQVSEKNGLYEAKTNLSMNGTWQVRVDIKSKEGEVYRA KTSLDL >UniRef50_C0QPP0(27-131:131) Putative lipoprotein n=1 Tax=Persephonella marina EX-H1 RepID=C0QPP0_PERMH E=2e-05 s/c=0.48 id=33% cov=99% -YKKELISDSYKVVIVSDQPPHVGVNKWKVYVyTKDGSAVTDASVKINGYMPPMPGMPEMSFDYPVKNTGQFYESDVNLSMSGTWQITIVVE-KGGKKES IKFGFNL >UniRef50_A5V049(60-139:148) Putative uncharacterized protein n=2 Tax=Roseiflexus RepID=A5V049_ROSS1 E=6e-16 s/c=1.06 id=32% cov=70% ------------------------DYAFVATITDAGdQPVEATLVYFDFTMPQM-EMGVHQPIAD-RLGPGKYGVRTLYSMEGDWRITV-VATIDGRDIR A------ >UniRef50_A4IP39(15-101:298) Putative uncharacterized protein n=2 Tax=Geobacillus RepID=A4IP39_GEOTN E=4e-06 s/c=0.60 id=33% cov=78% ------QGNDWTVSVKTSPFYKEGTaSSFAIAIQKDGKPASGLEVTAIF---EMANMDHGQIVASLEEKeDGLYEGDVQLPMEGEWDVLLQIK------- -------- >UniRef50_A3ITP2(502-599:602) Efflux transporter, RND family, MFP subunit n=2 Tax=Cyanothece RepID=A3ITP2_9CHRO E=1e-05 s/c=0.52 id=31% cov=63% ------------------------------------KPLQVKELDIKATMP-MKNMPPMTAKVEVKLESqtGKFKAETFLGMKGEWKISVDVKDEN---Y QGKKEFNI >UniRef50_Q3JBM0(453-536:553) Secretion protein HlyD n=2 Tax=Nitrosococcus oceani RepID=Q3JBM0_NITOC E=2e-05 s/c=0.59 id=25% cov=63% --------------------PVVGKNILVIYLRDqQGQPIRNAEVDAVAKISAEGSQSAREIPAKVREvKPGIYGGSLDLPRVGDWSL------------ -------- >UniRef50_A8EQX3(25-127:127) Putative uncharacterized protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EQX3_ARCB4 E=1e-27 s/c=1.20 id=35% cov=98% ---QKNQVDGYDVEITSTRDLSAGSNELFANITKDGKAVTTAKVKVKFFMPEMPGMPYMEHEGEGSLAGDKYKMTINFCMNGTWQYQLKFKTDDGVIHTV KSSVNF >UniRef50_C1PBU2(438-543:548) Copper resistance protein CopC n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBU2_BACCO E=3e-18 s/c=0.88 id=30% cov=87% PFKETKTVHQQEVTFSAT-PNVIGENTFTLSLKDrNGRPIEHiEQVTLTFTSLEM-EMGS-ESKVLKKVKDGYYRAKgMDFNMAGHWNVHVHVLKKD--- --------- >UniRef50_A9AW83(10-92:98) Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AW83_HERA2 E=4e-14 s/c=0.95 id=22% cov=75% -----------------------GQHAIIITIQDNGAPLTTPAVQLETTMSHAGMASQMIPME--SLGDGRYTANLNIDMLGEWVFIVHVPDPTGATSAR QKTL-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 1591 0 0 W 2 * * * * 972 * * * * * * * * * * * * * 2063 1995 2 0 * * * * * * 2428 0 0 E 3 * * * 1066 * * * * 937 * * * * * * * * * * * 3 0 * * * * * * 2428 0 0 Q 4 * * * 2119 * * * * 1375 * * * * 1380 * * * * * * 4 0 * * * * * * 2706 0 0 T 5 * * * 2363 * * * * 2336 * * * * * * * 1264 2388 * * 5 0 * * * * * * 2706 0 0 L 6 2388 * * * * * * * 2119 1393 * 2336 * * * * * * * * 6 0 * * * * * * 2706 0 0 K 7 * * * * * * * 2595 1721 * * * * 1543 * * 2411 * * * 7 0 * * * * * * 3049 0 0 A 8 2777 * * * * 2437 * * * * * * * * * 1630 * 1529 * * 8 0 * * * * * * 3049 0 0 N 9 * * 1626 * * * 2411 * * * * 1597 * * 2666 * * * * * 9 0 * * * * * * 3049 0 0 D 10 * * 1597 2666 * 2658 * * * * * * * 2411 * 2595 * * * * 10 0 * * * * * * 3049 0 0 L 11 * * * * * * * * * 2777 * * * 2411 * * 2666 * 2437 1626 11 0 * * * * * * 3049 0 0 E 12 * * 2658 1583 * * * * 2595 * * 2666 * * * * 2437 * * * 12 0 * * * * * * 3049 0 0 V 13 * * * * * * * * * * * * * * * * * 0 * * 13 0 * * * * * * 3049 0 0 K 14 * * * 2658 * * * * 2777 * * * * * * 2437 2411 1630 * * 14 0 * * * * * * 3049 0 0 I 15 * * * * 2411 * * 1090 * * 2666 * * * * * * 2437 * * 15 0 * * * * * * 3049 0 0 K 16 * * * * * * * * 1597 * * * * * * 1533 2658 2595 * * 16 0 * * * * * * 3049 0 0 S 17 2411 * * * * * * * * * * * * * * 673 2437 * * * 17 0 * * * * * * 3049 0 0 V 18 * * 2595 2666 * * * * * * * * * * * 2437 1529 2777 * * 18 300 * 2411 * * * * 3049 0 0 G 19 * * * * * 2415 * * 2379 * * * 2130 2336 2368 * * * * * 19 0 * * * * 0 * 2648 0 1000 N 20 * * 2658 * 2437 * * * * * * 2777 968 * * * * * * * 20 0 * * * * * * 3049 0 0 P 21 * * * * * * * * * 2307 * 3069 822 * * * * * * 3146 21 0 * * * * * * 3568 0 0 I 22 * * * * * * 2400 3616 3146 * * * * 3383 * 3270 3344 1653 * * 22 0 * * * * * * 3568 0 0 K 23 3270 * * 3146 * * * 3069 1905 * * * * * * * 3344 1743 * * 23 0 * * * * * * 3568 0 0 G 24 * * * * * 0 * * * * * * * * * * * * * * 24 0 * * * * * * 3818 0 0 D 25 * * 1881 3525 * * * * 2679 * * 3748 * 2546 * 3696 3600 3640 * * 25 124 3600 * 0 * * * 4084 1000 0 N 26 * * * * * * 3585 * * * * 649 * 2878 * 3730 * * * 3886 26 0 * * * * * * 4147 0 0 T 27 2150 * * 3811 * * * 2757 3691 * * * * * * 3730 1312 * * * 27 101 * 3882 * * * * 4147 0 0 F 28 * * * * 1756 * * 2631 * 2040 * * * * * * * 3815 2132 * 28 0 * * * * * 0 4085 0 1000 V 29 3663 * * * 3664 * 3643 3523 3563 * * * * * * * 3585 980 * * 29 0 * * * * 0 * 4085 0 1000 L 30 2848 * * * * * * 1174 * 1909 * * * * * * * 2720 * * 30 0 * * * * * * 4147 0 0 S 31 3730 * 3979 * * * * * * * * 2267 * * 3749 2302 2728 * * 2150 31 0 * * * * * * 4147 0 0 P 32 * * * * 3979 * * 1454 * 1728 3882 * 4163 * * * * 2775 * * 32 225 2792 * 0 * * * 4147 1568 0 T 33 * * * * * * * * 3652 * * 3899 * 2656 3628 3892 1063 3882 * * 33 0 * * * * * * 4147 0 0 L 34 * * 953 * * * * * 1781 4163 * * * 3864 * * * 3882 * * 34 511 1745 * 0 * * * 4147 2443 0 K 35 4028 * 2223 * * 3021 * * 3010 * * 2189 * 2372 * 3952 * * * * 35 0 * * * * * * 4164 0 0 G 36 4008 * * * * 183 * * * * * 4128 * * * * * * * * 36 83 4156 * 0 * * * 4211 1000 0 K 37 2909 * * 4241 * * * * 2174 * * 4221 * 1797 3866 3003 4116 * * * 37 0 * * * * * * 4288 0 0 A 38 1870 * * * * * * * 4241 * * * 708 * * * * 4031 * * 38 0 * * * * * * 4288 0 0 L 39 4096 * * * * * * 1939 * 1771 4273 * * * * * * 1820 * 4241 39 0 * * * * * * 4288 0 0 E 40 3257 * 3110 2183 * * * * * * * 4221 * 3049 3699 3059 2412 * * * 40 0 * * * * * * 4288 0 0 K 41 3207 * 2693 * * 2637 3918 * 3344 * * 2139 * * * * 3046 3977 * * 41 179 3918 4307 0 * * * 4492 1000 0 A 42 822 * * 3885 * * * * 2982 4240 * * 3732 * * 4055 4268 * * * 42 0 * * * * * 0 4422 0 1000 I 43 3734 * 3190 2349 * * * 3716 3271 3180 * * * 2485 * 4047 * 4740 * 4253 43 0 * * * * * 0 4402 0 1000 V 44 * * * * * * * 4396 3456 3315 * * * * * * * 394 * * 44 0 * * * * * 0 4351 0 1000 R 45 * * 2806 2851 * * * * 2791 * * * * 3001 3507 4806 2564 * * 2679 45 0 * * * * * 0 4351 0 1000 V 46 2525 * * * 4330 * * 1950 * 1772 * * * * * * * 2153 * * 46 0 * * * * * 0 4351 0 1000 Q 47 * * 2679 3001 * * * 4478 1735 * 4396 4131 * 4815 * * 4034 3619 * 3456 47 0 * * * * 0 * 4351 0 1000 F 48 2119 * * * 1084 4270 * 3561 * 3430 * * * * * * 3859 * * * 48 68 * 4451 * * * * 4467 0 0 M 49 4356 * 3282 * 2528 * * * 3610 * 4807 * * * * * 1534 * * 2238 49 0 * * * * * 0 4385 0 1000 M 50 * * * * * * * 3683 * * 214 * * * * 4062 * * * * 50 0 * * * * * 0 4410 0 1000 P 51 4093 * * * * * * * * 4062 * * 648 * * 2785 3345 * * * 51 91 * 4031 * * 0 * 4410 0 1000 E 52 1355 * * 2018 * * 3096 * * * * * 2783 4416 * 4236 * * * * 52 72 * 4360 * * 0 * 4348 0 1000 M 53 3752 * * 3710 * * * * * * 323 * * * * * * 4321 * * 53 165 * 3213 * * 0 * 4405 0 1000 P 54 3324 * * * * 2034 * * 3960 * * * 757 * * * * * * * 54 171 * 3158 * * 0 * 4211 0 1587 G 55 3969 * * 3011 * 1283 * * * * 2973 3210 * * * 2594 * * * * 55 0 * * * * 0 * 4213 0 1405 M 56 3917 * * * * * * * * * 219 * * 3749 * * * * * * 56 0 * * * * * * 4442 0 0 P 57 * * 3442 * * 1777 * * * * * * 1072 * * 2831 * * * * 57 0 * * * * * * 4442 0 0 A 58 2432 * 4414 2853 * * 4572 * * * 4151 * 4118 3090 * 3271 * 3479 * 2620 58 158 * 3271 * * * * 4442 0 0 M 59 4016 * * * * 4333 3262 * * * 748 4161 * * 3573 * 4354 * * * 59 0 * * * * 0 * 4205 0 1582 K 60 * * * 1569 * 4414 * 3917 3572 * * * * 2568 2925 3211 4118 * * * 60 0 * * * * * * 4442 0 0 E 61 3415 * 4323 3845 4273 * 3445 2625 * * 4151 * 2272 * * 2808 4925 4575 * * 61 0 * * * * * * 4442 0 0 M 62 4323 * 3499 4477 * 4414 * 4482 2606 4287 3336 4151 2713 * * * 4925 2914 4791 * 62 0 * * * * * * 4442 0 0 A 63 932 * * 3121 * 4477 * * * * * * * 4452 * * 3276 3114 * 4273 63 99 * 3917 * * * * 4442 0 0 Q 64 * * 3622 2402 * * * 4253 2481 3129 * * 3227 3719 * 3393 3241 * * * 64 143 * 3402 * * * 0 4309 0 1000 V 65 3315 4207 * 4052 * 3044 * 3495 3917 2765 4570 * * * * * * 1645 * * 65 212 3934 3808 2585 263 0 * 4147 1000 1943 S 66 * * * 2893 * * * * 1548 * * * 3333 4731 2989 2712 3211 * * * 66 145 3383 * 874 1138 0 * 4346 1559 1000 E 67 4790 * 4475 1559 * * * * 2491 1776 * 4273 * * * * * 4110 * * 67 240 2708 * 0 * * * 4442 1913 0 K 68 4477 * * 4118 * 1401 * 3557 2005 * * 4791 * * * * 3342 4323 * * 68 198 2964 * 0 * * * 4442 1831 0 N 69 4452 * 1797 * * 2949 * * * * * 2832 1790 * * 3217 * * * * 69 86 4118 * 1000 1000 * * 4442 1000 0 G 70 * * 3642 * * 345 * * * * * 4369 * 3567 * * * * * * 70 0 * * * * * * 4404 0 0 L 71 5423 * * * 4365 4802 * 2745 2181 2238 * 4325 * * 2692 * * 4356 * 4129 71 0 * * * * * * 4404 0 0 Y 72 * * * * 3245 * * * * * * * * * * * * * * 161 72 0 * * * * * * 4404 0 0 E 73 * * * 1562 * 2670 * * 3301 * * * * 2841 2681 * 3952 * 4548 * 73 0 * * * * * * 4404 0 0 A 74 1175 4369 * * * 1766 * * * * 4494 * * * * 4365 * 3036 * * 74 0 * * * * * * 4404 0 0 K 75 * * 3476 4131 * * * * 3490 * * 2156 * 4325 3533 3140 1907 5423 * * 75 159 3258 * 0 * * * 4404 1575 0 T 76 4196 * * * 4802 4325 * 3490 * 1999 4129 * * * * * 2512 1796 * * 76 0 * * * * * * 4404 0 0 N 77 4548 * 2101 4601 4131 * * 4325 3562 4518 * 1507 * 4597 * 4196 * * * * 77 0 * * * * * * 4404 0 0 L 78 * * * * 2362 * * 3317 * 943 * * * * * * * 4356 * 2875 78 0 * * * * * * 4404 0 0 S 79 4369 4494 3952 * 4401 3164 * * * * * 4129 2225 * * 1644 3432 * * * 79 0 * * * * * * 4404 0 0 M 80 * * * * * * * * * 5423 235 * * * 3791 4196 * * * * 80 0 * * * * * * 4404 0 0 N 81 2958 * 4356 2288 * 2886 * * 4131 3195 * 3004 * * * 3799 4401 3791 * * 81 0 * * * * * * 4404 0 0 G 82 * * * * * 0 * * * * * * * * * * * * * * 82 0 * * * * * * 4404 0 0 T 83 4325 * 3109 2268 * 4807 4129 * * 3472 * * 4356 5423 * 3698 1764 * * * 83 0 * * * * * * 4404 0 0 W 84 * * * * * * * * * * * * * * * * * * 0 * 84 0 * * * * * * 4404 0 0 Q 85 4284 * 4457 3455 * * * * 4070 * * 4110 4665 1341 4480 3688 5259 3160 * * 85 0 * * * * * * 4423 0 0 V 86 * * * * 3925 * * 1862 * 2617 * * * * * * * 1319 * 3390 86 0 * * * * * * 4423 0 0 R 87 4811 * * * * * 2826 2919 * 4326 * * * 3201 3493 3107 1610 * * * 87 0 * * * * * * 4221 0 0 V 88 * * * * 3943 * * 2517 * 2082 * * * * * * * 932 * * 88 185 * 3054 * * * * 4164 0 0 D 89 * * 3017 3638 2642 * 2461 * 3830 * * 4096 * 3870 3898 4296 * 2845 * * 89 0 * * * * 0 * 3914 0 1617 I 90 * * * * 3925 * * 1434 * * * * * * * * * 826 * * 90 0 * * * * * * 4109 0 0 K 91 2938 * * 2979 * * * * 1664 3716 * * 3456 * 4635 * 2187 * * * 91 111 * 3751 * * * * 3993 0 0 S 92 * * 1948 3745 * * * * 3512 * * * 4168 3503 * 3921 1439 * * * 92 0 * * * * 0 * 3727 0 1000 K 93 * * 2244 3639 * * * 3630 1535 * * 3949 3353 * * 3058 * * * * 93 0 * * * * * * 3821 0 0 E 94 * * 2105 3173 * 2779 * * * * * 1744 * * * 3949 2759 * * * 94 132 * 3514 * * * * 3821 0 0 G 95 * * * * 4120 220 * * * * * 3575 * * * * * * * * 95 0 * * * * * 0 3570 0 1000 E 96 2172 * * 2793 * * * * 1608 * * * * 3259 3186 * * 3450 * * 96 0 * * * * * 0 3480 0 1000 V 97 * * 2218 * * * * 3399 1957 * * * * * * * 2045 2393 * * 97 0 * * * * 0 * 3502 0 1000 Y 98 * * * 3395 * * 3400 2169 * * * * * * * 2771 * 3665 * 1464 98 0 * * * * * * 3532 0 0 R 99 1957 * * * * * * * * * * * * 3259 1497 3395 3400 3414 * * 99 0 * * * * * * 3532 0 0 A 100 1852 * * * * 3259 * 2536 * * * * * * 2771 * 3170 3400 * 3414 100 0 * * * * * * 3532 0 0 K 101 * * * * * * * * 266 * * * * 2568 * * * * * * 101 0 * * * * * * 3234 0 0 T 102 3359 * * * 2960 3198 * * 1631 * * * * * * 3042 2180 * * * 102 0 * * * * * * 3057 0 0 S 103 * * * 2896 * 2960 * * * * * * * * * 866 2406 * * * 103 0 * * * * * * 3057 0 0 L 104 * * * * 1928 * * * * 1330 * * * * * * * 1559 * * 104 0 * * * * * * 3057 0 0 D 105 * * 2793 * * * * * * * * 225 * * * * * * * * 105 0 * * * * * * 2604 0 0 L 106 * * * * 2751 * * 1243 * 1221 * * * * * * * * * * 106 0 * * 0 * * * 2604 0 0 //