HHsearch 1.5 NAME c9ll2B_ FAM FILE c9ll2B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9ll2B_.a3m DATE Sat Nov 22 11:25:36 2025 LENG 108 match states, 108 columns in multiple alignment FILT 37 out of 39 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.4147 -0.9228 SEQ >ss_pred CCHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEEECCCEECCCCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEEECCCCCEE EEEEEECC >ss_conf 9714443314724999992488623404999999629601346649999962267899876630002616983999998404733999999868887589 99986319 >Consensus xxxxxxxxxxxxxxvxxxxxxxpxxGxNtxvixitxxGxPlexAxVxlxfxMPxmxxMxxxxxxaxxxxxpGxYxxxxxlxMxGxWxvxvxixxxxgxxx xxkxxxxx >c9ll2B_ KDPWEQTLKANDLEVKIKSVGNPIKGDNTFVLSPTLKGKALEKAIVRVQFMMPEMPGMPAMKEMAQVSEKNGLYEAKTNLSMNGTWQVRVDIKSKEGEVY RAKTSLDL >UniRef50_A5V049(48-139:148) Putative uncharacterized protein n=2 Tax=Roseiflexus RepID=A5V049_ROSS1 E=7e-08 s/c=0.64 id=31% cov=81% ------------LTISLERPAQPIAlRDYAFVATITDAGdQPVEATLVYFDFTMPQM-EMGVHQPIAD-RLGPGKYGVRTLYSMEGDWRITV-VATIDGR DIRA------ >UniRef50_C5PU51(82-170:182) Putative uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C5PU51_9SPHI E=0.0004 s/c=0.52 id=29% cov=58% -----------------------------FVLHNTDKNNSpeLEGYSIALEPYMPAMGHGSSGNKNAEGT-GEGHYRGTVQLSMPGEWLIKAKL------ ---------- >UniRef50_C8X421(177-274:288) Putative uncharacterized protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X421_DESRD E=4e-08 s/c=0.60 id=23% cov=48% -------------------------------------------AVVTADGDMPQHGHGLPTRPEVSTTEQTGVYLVEgLKFHMPGWWRVILTIRT----- --------- >UniRef50_B3EEP0(46-138:145) Putative uncharacterized protein n=1 Tax=Chlorobium limicola DSM 245 RepID=B3EEP0_CHLL2 E=7e-05 s/c=0.52 id=24% cov=70% ------------------------KGANEVHVTIATHGEPLRNAHVT--FFVGNLSKKTYDKTVLMKETEPGSYRTTAVIPFEGVWLARVDINKEQLQTS R------- >UniRef50_Q3JBM0(445-540:553) Secretion protein HlyD n=2 Tax=Nitrosococcus oceani RepID=Q3JBM0_NITOC E=4e-12 s/c=0.76 id=25% cov=62% ----------------------PVVGKNILVIYLRDqQGQPIRNAEVDAVAKISAEGSQSAREIPAKVREvKPGIYGGSLDLPRVGDWSL---------- ---------- >UniRef50_D1CB68(554-655:663) Copper resistance protein CopC n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CB68_THET1 E=6e-06 s/c=0.51 id=20% cov=59% -------------------------------------GAPVANAQIKMAFLMPAHGHFL---DVFTSRQSPGVFiTGDVEMPMAGEWiaEIQVSIPGRHV NTYQIK----- >UniRef50_A7HTB3(82-167:171) FixH family protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HTB3_PARL1 E=0.0001 s/c=0.55 id=29% cov=57% -------------------------------------GAPLEGLAVHGTFWRPVAAG--EDRRMSLTETAPGIYTAVFALAHSGNWLVRISGTGPQGETF -------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 0 * * * * * * * * * * * 1 0 * * * * * * 1577 0 0 D 2 * * 987 1013 * * * * * * * * * * * * * * * * 2 0 * * * * * * 1577 0 0 P 3 1023 * * * * * * * * * * * 977 * * * * * * * 3 0 * * * * * * 2424 0 0 W 4 * * * * 967 * * * * * * * * * * * * * 2079 1990 4 0 * * * * * * 2424 0 0 E 5 * * * 1068 * * * * 935 * * * * * * * * * * * 5 0 * * * * * * 2424 0 0 Q 6 * * * 2125 * * * * 1368 * * * * 1384 * * * * * * 6 0 * * * * * * 2704 0 0 T 7 * * * 2355 * * * * 2333 * * * * * * * 1272 2380 * * 7 0 * * * * * * 2704 0 0 L 8 2380 * * * * * * * 2125 1395 * 2333 * * * * * * * * 8 0 * * * * * * 2704 0 0 K 9 * * * * * * * 2587 1721 * * * * 1542 * * 2421 * * * 9 0 * * * * * * 3040 0 0 A 10 2787 * * * * 2438 * * * * * * * * * 1621 * 1533 * * 10 0 * * * * * * 3040 0 0 N 11 * * 1620 * * * 2421 * * * * 1602 * * 2657 * * * * * 11 0 * * * * * * 3040 0 0 D 12 * * 1602 2657 * 2654 * * * * * * * 2421 * 2587 * * * * 12 0 * * * * * * 3040 0 0 L 13 * * * * * * * * * 1871 * * * 2691 * * 2886 * 2687 1830 13 0 * * * * * * 3285 0 0 E 14 * * 2858 1869 * * * * 2802 * * 2886 * * * * 1691 * * * 14 0 * * * * * * 3285 0 0 V 15 * * * * * * * 2695 * * * * * * * * * 242 * * 15 0 * * * * * * 3285 0 0 K 16 * * * 2858 * * * * 3072 * * * * * * 1691 2691 1844 * * 16 0 * * * * * * 3285 0 0 I 17 * * * * 2691 * * 1321 * 2695 2886 * * * * * * 2687 * * 17 0 * * * * * * 3285 0 0 K 18 * * * 2695 * * * * 1867 * * * * * * 1785 2858 2802 * * 18 0 * * * * * * 3285 0 0 S 19 2691 * * * * * * * * * * * * * 2695 901 2687 * * * 19 0 * * * * * * 3285 0 0 V 20 * * 2802 2886 * * * * * * * * 2695 * * 2687 1772 3072 * * 20 0 * * * * * * 3285 0 0 G 21 2695 * * * * 3072 * * 2886 * * * 1689 2802 2858 * * * * * 21 0 * * * * * * 3285 0 0 N 22 * * 2858 * 2687 * * * * * * 1869 1844 2695 * * * * * * 22 243 * 2691 * * * * 3285 0 0 P 23 * * * * * * * * * 2529 * * 446 * * * * * * 3431 23 0 * * * * 0 * 3826 0 1000 I 24 * * * * * * 2293 2857 3563 3398 * * * 3721 * 3641 3641 2045 * * 24 0 * * * * * * 4033 0 0 K 25 2948 * * 3957 * * * 3879 1555 * * * * 3773 * 3650 3946 2473 * * 25 103 3865 * 0 * * * 4598 1000 0 G 26 * * * * * 201 * * * * * * * * 4027 3869 * * * * 26 0 * * * * * * 4822 0 0 D 27 4161 * 2094 3129 * * * 3935 3335 4254 * 4202 * 3259 * 4288 3179 4101 * * 27 75 4303 * 0 * * * 4895 1000 0 N 28 * * * * * * 3170 * * * * 530 * 3403 * 4306 * * * 4292 28 0 * * * * * * 4921 0 0 T 29 2782 * * 2646 * * * 3481 4118 * * * * * * 4306 1008 * * * 29 76 * 4284 * * * * 4921 0 0 F 30 * * * * 1717 * * 3372 * 2300 * * * * * * * 2778 1998 * 30 0 * * * * * 0 5045 0 1000 V 31 4339 * 4257 4153 4250 * 3319 4357 4040 * * * * * * * 2580 1278 * * 31 0 * * * * 0 * 5045 0 1000 L 32 3401 * * * 4230 * * 1864 * 1647 * * * * * * * 1954 * * 32 0 * * * * * * 5086 0 0 S 33 2686 * 3635 * * * 4280 * * * * 2811 * 4190 4546 2916 2789 4230 * 2816 33 0 * * * * * * 5086 0 0 P 34 * * * * 3635 * * 1798 * 2097 4436 4280 4797 * * * * 1919 * * 34 82 4176 * 0 * * * 5086 1000 0 T 35 4256 * * * 4320 * * * 4293 * * * * 2917 4339 4457 803 4436 * * 35 109 3777 * 0 * * * 5086 1524 0 L 36 * * 1405 4230 * * * * 2396 3804 * * * 4421 * 4119 3222 3377 * * 36 301 2410 * 0 * * * 5086 2450 0 K 37 3510 * 2854 * * 2561 3226 * 3002 * * 2446 * 2784 * 4502 * * * * 37 0 * * * * * * 5157 0 0 G 38 4768 * * * * 180 * * * * * 3635 * * * * * * * * 38 47 4952 * 0 * * * 5358 1000 0 K 39 2590 * 4570 3741 * * * * 1932 * * 3215 * 2349 4583 3754 4824 * * * 39 62 4570 * 0 * * * 5398 1000 0 A 40 2584 * * * * * * * 4898 * * * 487 * * 4479 * 4590 * * 40 66 4479 * 1000 1000 * * 5398 1000 0 L 41 4899 * * * 4340 * * 2503 * 1422 3939 * * * * * * 1896 * 4898 41 0 * * * * * * 5398 0 0 E 42 2830 * 3690 1483 * * * * 4696 * * 4986 * 3938 3166 3911 3173 * * * 42 0 * * * * * * 5398 0 0 K 43 3792 * 2925 * * 2011 4586 * 4074 * * 1982 * 3517 * * 3880 4699 * * 43 103 4586 5184 0 * * * 5464 1000 0 A 44 780 * * 4572 * 4330 * * 3631 3178 * * 4856 * * 4897 5047 * * 4782 44 0 * * * * * 0 5623 0 1000 I 45 3640 * 3756 3217 * * 4528 4385 3379 3983 * 4313 * 2559 4779 3848 3671 4241 * 5036 45 0 * * * * * 0 5682 0 1000 V 46 * * * * * * * 2254 4195 4011 4801 * * * * * * 649 * * 46 0 * * * * * 0 5703 0 1000 R 47 4921 * 3670 3698 * * 3766 * 2948 * * * * 3353 3401 3837 2001 * * 3382 47 62 * 4565 * * * 0 5703 0 1000 V 48 2364 * * * 3863 4387 * 2657 * 1511 4576 * * * * * * 2859 * * 48 61 * 4583 * * * 0 5559 0 1709 Q 49 4531 * 2906 3305 4382 4719 * 5268 2371 3978 5360 4828 * 5454 * * 3438 3073 * 4055 49 95 * 3978 * * 580 1595 5483 0 2111 F 50 1968 * * * 1127 3933 * 4077 * 4123 * * 3890 * * * 4757 * * * 50 37 * 5291 * * 1000 1000 5424 0 1475 M 51 5367 * 3347 5007 2291 4499 * * 4453 4535 4141 * * * * * 2046 * 4374 2625 51 0 * * * * 978 1022 5505 0 1673 M 52 * * * * * * * 3695 * 3477 504 * * * 4469 4625 * 4565 * * 52 115 * 3711 * * * 0 5715 0 1000 P 53 4880 * * * * 2799 * * * 4614 * * 571 * * 4437 4002 * * * 53 106 * 3821 * * 598 1558 5543 0 2177 E 54 1598 * 4792 2284 * * * * * * * 2789 3389 3948 * 3733 * 4377 * * 54 0 * * * * 0 * 5544 0 2126 M 55 4507 * * 4610 * * 2333 4845 * 4581 928 * * * * * * 3127 * * 55 103 * 3860 * * * * 5723 0 0 P 56 2852 * * * * 1810 * * 4731 * * * 1459 * * 2517 * * * * 56 107 * 3811 * * 0 * 5559 0 1637 G 57 4889 * * 3672 * 1544 2455 * 4480 * 5064 4011 * * * 2511 4314 * * * 57 71 * 4387 * * 0 * 5575 0 1437 M 58 * * * 4556 4576 2885 * * 3606 * 726 4315 * 4530 * * * * * * 58 54 * 4778 * * * 0 5609 0 1000 P 59 * * 4086 * * 2304 * * 4593 3680 4705 4259 1614 * * 3068 3597 * * * 59 66 * 4492 * * 0 * 5481 0 1617 A 60 2695 * 5227 2882 * 4783 5227 * * * 4994 3537 3244 4817 * 3307 * 4078 * 2312 60 101 * 3887 * * * 0 5637 0 1000 M 61 4879 * 2104 * * 4010 3973 * * * 1558 4731 * * 4400 4659 3216 4804 * * 61 0 * * * * 604 1548 5491 0 2195 K 62 * * * 2160 * 3857 * * 3318 * * 3900 * 2427 2318 3944 3499 * * * 62 0 * * * * 0 * 5637 0 1000 E 63 3353 * 3824 4478 4962 * 4169 2909 4945 * 3951 * 2667 * 4507 3316 2789 5495 * * 63 0 * * * * * * 5723 0 0 M 64 5036 4845 4172 3390 * 5258 4627 3982 3146 3596 3934 3988 3443 * * * 5627 2371 5361 * 64 0 * * * * * * 5723 0 0 A 65 1468 * * 4781 4638 5086 * 4813 4627 4581 * * 3859 5261 * 4507 3257 2846 * 4962 65 0 * * * * * * 5723 0 0 Q 66 * * 4340 2739 * * * 4781 3321 3187 2329 * 4102 4478 4813 3532 2939 * * * 66 84 * 4142 * * * * 5723 0 0 V 67 4207 4771 * 3339 * 3258 * 4335 3562 3595 5045 * 4674 4340 * 4550 3594 2265 * 4776 67 110 5029 4549 2585 263 0 * 5615 1000 1407 S 68 * * * 1750 * * * * 2194 * * * 4116 5079 3131 2989 2672 * * * 68 133 4191 4899 750 1302 0 * 5657 1522 1000 E 69 5072 * 5159 1669 * * 4596 * 3084 2463 * 4896 * 4605 * * 2543 4611 * * 69 185 3054 * 0 * 0 * 5679 2215 1000 K 70 2690 * * 3041 * 1970 * 3963 2473 4645 * 5349 * 5049 * 4637 3488 * * * 70 80 4206 * 0 * * * 5715 1474 0 N 71 5277 * 2345 5100 * 3662 * * * * * 3323 1167 * 4889 4056 5056 * * * 71 49 4913 * 1000 1000 * * 5679 1000 0 G 72 * * 4044 * * 290 * * * * * 3837 * 4285 * * * * * * 72 0 * * * * * * 4985 0 0 L 73 4818 * * * 3229 5344 5241 2562 2846 3046 * 4563 * * 3496 4711 4093 3103 * 4913 73 0 * * * * * * 4985 0 0 Y 74 * * * * 3213 * * * * * * * * * * * * * * 165 74 50 4871 * 0 * * * 4985 1000 0 E 75 4141 * * 2337 * 3762 5342 * 3771 4127 * * * 2541 2381 * 3362 * 5348 5016 75 0 * * * * * * 4985 0 0 A 76 1525 4677 * * 5214 1818 * * * 5072 4693 * * * * 5228 3695 2936 * * 76 0 * * * * * * 4985 0 0 K 77 * * 2791 3105 * * * * 3317 * * 2871 * 4563 3725 4334 1903 3894 * * 77 239 2709 * 0 * * * 4985 2467 0 T 78 3141 * * * 4240 4563 * 2925 * 2300 3990 * * * * * 3332 1764 * * 78 0 * * * * * * 4985 0 0 N 79 4149 * 2762 4286 4034 * * 4563 3183 5373 * 1720 5354 4338 * 3446 * 4711 * * 79 0 * * * * * * 4985 0 0 L 80 * * * * 2111 * * 2699 * 1277 4878 * * * * * * 4221 * 3127 80 0 * * * * * * 4994 0 0 S 81 3019 4704 5006 * 4965 4157 4159 * * * * 4937 1909 * * 2039 3049 * * * 81 0 * * * * * * 4994 0 0 M 82 * * * * 4003 * 4981 * * 4827 411 * * * 4968 4380 * * * 4693 82 0 * * * * * * 4994 0 0 N 83 2844 * 5195 2342 * 3644 * * 3776 4166 * 3425 3620 * * 3086 3275 4968 * * 83 0 * * * * * * 4994 0 0 G 84 * * * * * 0 * * * * * * * * * * * * * * 84 0 * * * * * * 4994 0 0 T 85 4576 * 4162 2539 * 5519 4937 * 3944 4147 * 4981 5195 4827 5234 4737 2276 4716 3366 4198 85 0 * * * * * * 4994 0 0 W 86 * * * * * * * * * * * * * * * * * * 0 * 86 51 4853 * 1000 1000 * * 4994 1000 0 Q 87 4642 * 5346 3004 4722 * * * 4005 2648 6197 4990 5372 2163 3685 4996 3967 3548 * * 87 0 * * * * * * 5056 0 0 V 88 4831 * * * 5046 * * 1965 * 2466 * * * * * * 4722 1375 * 3755 88 0 * * * * * * 5056 0 0 R 89 4765 * * * * * 3687 3494 3660 5282 * 3516 * 3111 2393 2928 2581 * * * 89 0 * * * * * * 5007 0 0 V 90 4868 * * * 3840 * * 2706 * 1530 * * * * * * * 1335 * * 90 184 5164 3446 1000 1000 * * 5103 1000 0 D 91 4780 * 2497 3553 3491 4977 3764 4861 2704 * * 5106 * 5182 5163 2865 4866 3989 * * 91 0 * * * * 0 * 4944 0 2016 I 92 * * * * 3080 4598 * 1421 * 2841 * * * * * * * 1611 * * 92 0 * * * * * * 5103 0 0 K 93 2897 * * 3380 * * * * 2166 4703 4569 4408 3278 4846 3756 * 2269 * * * 93 44 * 5069 * * * * 5177 0 0 S 94 5448 * 2738 3692 * 2380 * * 3459 * * 4457 5339 5073 * 4044 1881 * 4845 * 94 0 * * * * 0 * 5142 0 1000 K 95 3038 * 2886 3019 4395 * * 4883 2435 * * 3862 2782 * 4200 3563 * * * * 95 0 * * * * * * 5039 0 0 E 96 4705 * 2369 3630 * 3626 4169 * * * * 2782 * 2402 * 3619 2893 * * * 96 61 * 4606 * * * * 5049 0 0 G 97 * * * * 4093 582 * * * 3799 * 2841 * * * * * 4014 * * 97 70 * 4407 * * * 0 4949 0 1000 E 98 3394 * * 2217 * * * * 2041 * * 3798 * 2514 3530 * 4367 3948 * * 98 0 * * * * 979 1021 4792 0 1652 V 99 * * 3308 4008 * * * 3942 2988 * * * * * * * 1322 2024 * * 99 0 * * * * 0 * 4731 0 1000 Y 100 * * 4628 4287 3923 * 3771 2706 * 3981 * * * * * 2836 * 4645 * 1424 100 0 * * * * * * 4745 0 0 R 101 3088 * * * * * * * 2989 * * * * 2367 1426 4163 3715 4099 * * 101 0 * * * * * * 4611 0 0 A 102 1757 * * * * 2741 * 1990 * * * * * * 3616 * 3830 3574 * 3899 102 0 * * * * * * 4348 0 0 K 103 * * * 3297 * * * * 604 * * * * 3409 * * 2775 * * * 103 0 * * * * * * 4067 0 0 T 104 3631 * * * 1798 3433 * * 1989 * * * * * * 3265 2449 * * * 104 0 * * * * * * 3385 0 0 S 105 * * * 3122 * 3270 * * * * * 4299 * 2909 * 1119 2867 * * * 105 0 * * * * * * 3385 0 0 L 106 * * * * 2194 * * * * 1473 * * * * 2909 * * 1795 * * 106 0 * * * * * * 3385 0 0 D 107 * * 1795 * * * * * * * * 490 * * * * * * * * 107 0 * * * * * * 2976 0 0 L 108 * * * * 2949 * * 1517 * 1522 * * * * * * * 2531 * * 108 0 * * 0 * * * 2976 0 0 //