HHsearch 1.5 NAME c9lk4L_ FAM FILE c9lk4L_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9lk4L_.a3m DATE Sat Jun 21 12:31:07 2025 LENG 37 match states, 37 columns in multiple alignment FILT 3 out of 5 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.3 EVD 0.4999 2.8125 SEQ >ss_pred CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9988664532300246999999999999998443049 >Consensus txsnxnxxxvelnxtslyxgllxifvxxvlxsxyffn >c9lk4L_ TQSNPNEQSVELNRTSLYWGLLLIFVLAVLFSNYFFN >UniRef50_B9NDP4(36-72:81) Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NDP4_POPTR E=3e-10 s/c=1.79 id=84% cov=103% TQSNSNEQNVELNHSSLYWGLLLIFVVAVLFSNYFFN >UniRef50_Q3B0C8(4-39:39) Photosystem II reaction center protein L n=32 Tax=cellular organisms RepID=PSBL_SYNS9 E=3e-05 s/c=1.37 id=65% cov=100% -NTNPNNLPVELNRTSLYLGLLFVFVTGVLMSSYFFN # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * * 0 * * * 1 0 * * * * * * 1098 0 0 Q 2 * * * * * * * * * * * 1424 * 673 * * * * * * 2 0 * * * * * * 1345 0 0 S 3 * * * * * * * * * * * * * * * 673 1424 * * * 3 0 * * * * * * 1345 0 0 N 4 * * * * * * * * * * * 0 * * * * * * * * 4 0 * * * * * * 1345 0 0 P 5 * * * * * * * * * * * * 565 * * 1626 * * * * 5 0 * * * * * * 1345 0 0 N 6 * * * * * * * * * * * 0 * * * * * * * * 6 0 * * * * * * 1345 0 0 E 7 * * * 673 * * * * * * * 1424 * * * * * * * * 7 0 * * * * * * 1345 0 0 Q 8 * * * * * * * * * 1424 * * * 673 * * * * * * 8 0 * * * * * * 1345 0 0 S 9 * * * * * * * * * * * 1626 1424 * * 1721 * * * * 9 0 * * * * * * 1345 0 0 V 10 * * * * * * * * * * * * * * * * * 0 * * 10 0 * * * * * * 1345 0 0 E 11 * * * 0 * * * * * * * * * * * * * * * * 11 0 * * * * * * 1345 0 0 L 12 * * * * * * * * * 0 * * * * * * * * * * 12 0 * * * * * * 1345 0 0 N 13 * * * * * * * * * * * 0 * * * * * * * * 13 0 * * * * * * 1345 0 0 R 14 * * * * * * 1626 * * * * * * * 565 * * * * * 14 0 * * * * * * 1345 0 0 T 15 * * * * * * * * * * * * * * * 1626 565 * * * 15 0 * * * * * * 1345 0 0 S 16 * * * * * * * * * * * * * * * 0 * * * * 16 0 * * * * * * 1345 0 0 L 17 * * * * * * * * * 0 * * * * * * * * * * 17 0 * * * * * * 1345 0 0 Y 18 * * * * * * * * * * * * * * * * * * * 0 18 0 * * * * * * 1345 0 0 W 19 * * * * * * * * * 1424 * * * * * * * * 673 * 19 0 * * * * * * 1345 0 0 G 20 * * * * * 0 * * * * * * * * * * * * * * 20 0 * * * * * * 1345 0 0 L 21 * * * * * * * * * 0 * * * * * * * * * * 21 0 * * * * * * 1345 0 0 L 22 * * * * * * * * * 0 * * * * * * * * * * 22 0 * * * * * * 1345 0 0 L 23 * * * * 1424 * * * * 673 * * * * * * * * * * 23 0 * * * * * * 1345 0 0 I 24 * * * * * * * 673 * * * * * * * * * 1424 * * 24 0 * * * * * * 1345 0 0 F 25 * * * * 0 * * * * * * * * * * * * * * * 25 0 * * * * * * 1345 0 0 V 26 * * * * * * * * * * * * * * * * * 0 * * 26 0 * * * * * * 1345 0 0 L 27 * * * * * * * * * 1721 * * * * * * 1424 1626 * * 27 0 * * * * * * 1345 0 0 A 28 673 * * * * 1424 * * * * * * * * * * * * * * 28 0 * * * * * * 1345 0 0 V 29 * * * * * * * * * * * * * * * * * 0 * * 29 0 * * * * * * 1345 0 0 L 30 * * * * * * * * * 0 * * * * * * * * * * 30 0 * * * * * * 1345 0 0 F 31 * * * * 673 * * * * * 1424 * * * * * * * * * 31 0 * * * * * * 1345 0 0 S 32 * * * * * * * * * * * * * * * 0 * * * * 32 0 * * * * * * 1345 0 0 N 33 * * * * * * * * * * * 673 * * * 1424 * * * * 33 0 * * * * * * 1345 0 0 Y 34 * * * * * * * * * * * * * * * * * * * 0 34 0 * * * * * * 1345 0 0 F 35 * * * * 0 * * * * * * * * * * * * * * * 35 0 * * * * * * 1345 0 0 F 36 * * * * 0 * * * * * * * * * * * * * * * 36 0 * * * * * * 1345 0 0 N 37 * * * * * * * * * * * 0 * * * * * * * * 37 0 * * 0 * * * 1345 0 0 //