HHsearch 1.5 NAME c9lj2B_ FAM FILE c9lj2B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9lj2B_.a3m DATE Sat Apr 12 10:33:05 2025 LENG 87 match states, 87 columns in multiple alignment FILT 106 out of 318 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.5 EVD 0.3999 -0.8703 SEQ >ss_pred CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC >ss_conf 930232070012476558999999995165421999999999999999999999999998629986499999999998288788889 >Consensus xxxxxkxxxxxxxxIxkxxIxrlaxxxGxxrIsxdaxxxlxxxxxxfixxixxxAxxxaxhxkRkTIxxxDVxxALxrxgxxxYGxx >c9lj2B_ AKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG >UniRef50_B3L5R9(1009-1107:1192) Ccaat-box dna binding protein subunit b,putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L5R9_PLAKH E=0.0001 s/c=0.48 id=17% cov=95% ----KKIKPDSETLLPIANISRIMKRIlpASAKVAKESKDIIRECVTEFIQFLTSEVSEkggqthasdRCVRERRKTISGEDILFSMEKLGfndyvEPLY KY- >UniRef50_B0ENK5(4-78:433) Transcription initiation factor tfiid, putative n=2 Tax=Entamoeba RepID=B0ENK5_ENTDI E=2e-11 s/c=0.93 id=23% cov=86% ------------QKIPLDFIKSMLTANGFEEMSDEMINLISEEAENSISELFNEATKFMRHSKRKMLTIQDINSALKlKKLEPYYGY- >UniRef50_D0N7M9(21-95:474) Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0N7M9_PHYIN E=6e-09 s/c=0.83 id=25% cov=78% -------------------VRRFLLRAGFRSSSDRAAAEVRRHVSDFFRRIVGCMVVMMQHDGRRNFRLIDVKRACEHFGIRMYGY- >UniRef50_C4R5Y2(271-340:387) Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4R5Y2_PICPG E=4e-05 s/c=0.70 id=24% cov=78% ----------------KSMILKMVKfKTGRTTIGPNLYPTLQSISDDFFTQVSEDLCRYAEHGRRSMVNFTDIQLLTQRINKNL---- >UniRef50_C1EFU7(96-164:245) Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFU7_9CHLO E=7e-05 s/c=0.70 id=22% cov=59% ----------------------------VKNMQVDASKCVAKCAELFIESLVEGSFRSMKANKRKTIKYGDVEHHVLR--------- >UniRef50_C6SZ53(9-83:161) Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6SZ53_SOYBN E=0.0007 s/c=0.60 id=19% cov=78% --------RSIVRRVVKDKLSRCSEDGEIS-VSKDALLAFSESGRIFIHYLSATANDICKESKRQIINVEDVFKAL----------- >UniRef50_B4JIU1(11-75:735) GH17238 n=1 Tax=Drosophila grimshawi RepID=B4JIU1_DROGR E=0.0008 s/c=0.69 id=21% cov=72% --------------ISEKSLQAIAQQTITQTLSKDMVKKIGQCVREKFSNIIEDAVKGAKWSRSATVQKKHIIYAL----------- >UniRef50_P49905(86-166:196) Transcription initiation factor TFIID subunit 12 n=16 Tax=Diptera RepID=TAF12_DROME E=2e-08 s/c=0.74 id=22% cov=91% ---------ENTPMLTKPRLTELVREVDtTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDVQLHFERkYNMWIPGFG >UniRef50_D2VWB2(94-182:186) Histone H3 n=1 Tax=Naegleria gruberi RepID=D2VWB2_NAEGR E=4e-07 s/c=0.63 id=22% cov=98% -REIRKYQKSTELLIKKKPFCRLVREVAQDyksdvRFQANSLLALQEAAEAFIIDIFEDTNLCAIHSKRVTILLKDMQLALRVKGVNYIG-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 2372 0 0 K 2 * * * 3517 * * * * 903 * * * * 2004 2962 * * * * * 2 0 * * * * * * 4166 0 0 R 3 * * * 2250 * * * * 2899 * * * 3636 * 798 * * * * * 3 0 * * * * * * 4215 0 0 H 4 * * * 3511 * * 2441 2250 2067 3615 3939 * * * 3978 * * * * 3856 4 0 * * * * * * 4215 0 0 R 5 3598 * * * * * * * 1737 * 4128 * 3607 4043 1260 * * * * * 5 0 * * * * * * 4454 0 0 K 6 * * * * * * * * 215 * * 3793 * * 3909 * * * * * 6 98 * 3923 * * * * 4680 0 0 V 7 3493 * * * * * * 2318 3677 2868 4051 2821 * 3988 * * * 4297 * 2475 7 115 3702 * 0 * * 0 4541 1000 1000 L 8 * 4042 * * * * * * 2991 4409 * 2683 * 2146 * 2125 2684 * * * 8 0 * * * * 0 * 4751 0 1000 R 9 * * 3706 * * * * * 1815 * * * 3911 * 1100 3233 * * * * 9 0 * * * * * * 5103 0 0 D 10 * * 1080 3440 * * 3673 * 4392 4687 * * * 4437 * 2524 4328 * * * 10 72 * 4365 * * * * 5626 0 0 N 11 2823 * * 3994 * 3651 * 4138 3208 * * 2603 * * * 2402 2341 * * * 11 62 * 4564 * * * 0 5467 0 1000 I 12 * * * 1507 * * * 1656 4188 4667 * 4372 * * * * 3509 3313 * * 12 0 * * * * 939 1063 5574 0 1576 Q 13 * * 4852 * * * * * 3629 3246 3690 3515 2303 2727 3339 * 4603 * * 3052 13 88 4075 * 2585 263 * 0 5826 1322 1000 G 14 3046 * * 4491 4664 1639 * * 4588 3177 4743 * * * 4509 3180 * 2940 * * 14 0 * * * * 0 * 5826 0 1000 I 15 * * * * * * * 719 * 2173 4579 * * * * * * 2957 * * 15 40 5177 * 0 * * * 6217 1000 0 T 16 * * * * * * * 5463 5223 4640 * 5159 1761 * 5334 1561 2603 4078 * * 16 118 5202 4274 2807 222 * * 6244 1000 0 K 17 4535 * 5688 4151 * * * 5163 685 4226 * 4262 * 4318 4354 5226 * * * * 17 0 * * * * * 0 6348 0 1599 P 18 2479 * 3558 3524 * 3894 5102 * 2796 3613 * 5167 3004 5416 4758 3488 5343 * * * 18 60 4608 * 0 * 889 1120 6348 1000 1599 A 19 3445 4339 4500 * 4323 * * 4619 3971 5698 5217 3895 3081 * 4377 1970 3324 * * 5308 19 0 * * * * * 0 6517 0 1000 I 20 4777 * * * 3924 * * 947 * 2634 5042 * * * * * * 2416 * * 20 0 * * * * * 0 6593 0 1000 R 21 4503 5604 5164 * * 5088 * 5693 1948 5457 * * * 3085 1520 4439 3967 * * * 21 0 * * * * * 0 6593 0 1000 R 22 5256 * 4511 3815 * * * 6085 2790 5577 * * * 5699 1003 3898 5888 3711 * * 22 32 5510 * 0 * * 0 6578 1000 1000 L 23 * 5344 * * 3271 * * 1711 * 1405 4134 * * * * * * 3368 * 4837 23 0 * * * * * 0 6591 0 1000 A 24 1001 * * * 5898 5756 * 4305 * 3063 3067 * * * * 5344 * 2728 * * 24 0 * * * * 0 * 6591 0 1000 R 25 * * 5845 2365 * * 5329 * 2044 4323 * 4739 * 3909 1649 5863 5003 * * * 25 31 5541 * 0 * * * 6606 1000 0 R 26 4683 * 4737 3213 * * 5056 4920 3757 * * 3794 * 3404 2080 2239 4537 5597 * * 26 67 4452 * 1420 675 * * 6606 1995 0 G 27 2407 4783 * 5966 5314 2322 4893 3533 6258 3915 6114 5800 * 5922 * 3832 4484 2675 * 6133 27 71 4383 * 1000 1000 * * 6689 1886 0 G 28 4394 * 4857 4685 * 583 * 5400 * 3635 * * 5595 * * 3875 5762 * * * 28 27 5757 * 0 * * * 6770 1000 0 V 29 3180 4972 * * 4370 4444 5062 2334 4436 5829 5623 6272 4101 4424 4813 4218 4659 2290 * * 29 0 * * * * * * 6840 0 0 K 30 3102 * 3126 2918 * 5459 5866 6183 1914 * 6010 6196 * 4050 3844 4661 3756 4471 * * 30 181 3304 5928 1968 426 * * 6949 2880 0 R 31 * * 4400 5369 5734 5823 * 6566 2643 * 5469 3875 6505 4308 1095 3839 5000 * * * 31 31 5541 * 2585 263 0 * 7000 1073 1000 I 32 * * * * 5299 * * 1145 * 2406 3557 * * * * 5150 * 2180 * * 32 15 6602 * 1000 1000 * * 7018 1000 0 S 33 3448 * 3919 4717 * 4421 * * * * * 5309 5590 3420 6516 920 3664 * * * 33 0 * * * * * * 7018 0 0 G 34 2990 6050 2286 4691 * 3140 * * 1972 * * 3881 4331 * 4915 3980 * 5500 * 6531 34 0 * * * * * * 7018 0 0 L 35 3795 * 1192 1859 * 5173 * * * 6319 * 4388 * * 5151 4664 4570 5882 * * 35 0 * * * * * * 7017 0 0 I 36 1251 3712 * * 6259 6486 * 3387 * 5155 5275 * * * * 3661 4551 2264 * * 36 0 * * * * * * 7017 0 0 Y 37 3351 6516 * 4132 6202 * * 5606 2935 2901 5867 6294 4928 5433 3543 4220 6662 3052 * 2477 37 0 * * * * * * 7017 0 0 E 38 3324 6196 2640 1847 * 5818 * 5066 3485 3946 5424 5237 5050 4243 4622 4303 6445 6537 * * 38 0 * * * * * * 7021 0 0 E 39 2306 4536 5215 2605 5467 * 5941 4608 4571 2532 4864 6676 * 5900 * 4413 3277 4456 * 6387 39 0 * * * * * * 7032 0 0 T 40 5185 * * * 3976 * * 1996 * 1343 4362 * * * * 5844 5088 2569 * * 40 0 * * * * * * 7089 0 0 R 41 2493 5577 5846 5141 * 5502 5851 6658 5801 3428 6935 4280 * 2350 2661 3241 4995 4489 * * 41 0 * * * * * * 7213 0 0 G 42 5448 * 3150 1898 6555 6547 * * 2770 5671 6755 3626 5609 3144 3189 5317 4702 6452 * * 42 0 * * * * * * 7111 0 0 V 43 2155 2491 3611 4768 5543 * 4674 3337 6064 4358 4992 * * 5464 * 3665 * 3795 * 4302 43 0 * * * * * * 7111 0 0 L 44 1724 3646 * * 4992 5134 * 3394 * 3031 5671 * * * * 4082 4115 2384 * 6384 44 0 * * * * * * 7111 0 0 K 45 * 6556 2975 1799 * 6633 * 4357 3725 * * 4136 * 6198 4970 3082 3163 3209 * * 45 0 * * * * * * 7116 0 0 V 46 4214 * 3309 1804 5465 6595 * 3980 4556 3771 5294 5957 * 4615 * 5121 6339 3265 5270 3422 46 0 * * * * * * 7149 0 0 F 47 6467 * 6327 6586 773 * * 5608 5189 4121 6883 * * * 2698 6002 * * 6849 3499 47 0 * * * * * * 7144 0 0 L 48 4178 * * * 3490 5859 * 1731 * 1813 5085 * * * * 6013 * 2267 * * 48 0 * * * * * * 7144 0 0 E 49 5119 6828 3640 3070 * 4273 4197 6841 3032 3981 5205 4806 * 5910 2923 3151 3905 3799 * * 49 0 * * * * * * 7144 0 0 N 50 5646 5937 4054 2441 4009 6617 4419 4545 4719 4701 4421 3580 * 2968 4130 4410 5266 6013 * 3695 50 0 * * * * * * 7144 0 0 V 51 4794 5845 * * * * * 1680 * 1774 5091 * * * * * 5507 1782 * * 51 0 * * * * * * 7144 0 0 I 52 2645 5946 * * 3960 5537 * 3432 5911 2790 3567 * * * * 3355 2324 3288 * * 52 0 * * * * * * 7144 0 0 R 53 4279 5972 4300 2404 5696 4152 5480 * 4551 4261 * 3850 * 2800 3186 2869 6014 6242 * 6412 53 0 * * * * * * 7144 0 0 D 54 4203 4154 1921 2404 4783 4608 5132 6682 4162 5952 6731 6838 * 3435 3481 6354 5080 7168 * * 54 0 * * * * * * 7144 0 0 A 55 722 5100 * * * 5430 * 6390 * 3671 5289 * * * * 3154 4298 4007 * * 55 0 * * * * * * 7144 0 0 V 56 3519 3567 6523 6283 5895 6692 * 3657 4379 4622 4752 2734 * 4523 4652 2960 3850 3384 5212 5721 56 0 * * * * * * 7144 0 0 T 57 4032 * 3438 3095 * 6117 * 3291 2050 3997 5380 6771 * 3948 3553 6434 3941 4578 * 7115 57 10 7236 * 3170 170 * * 7144 1000 0 Y 58 4650 4724 * 6027 2222 6406 5035 2752 4864 2904 4447 5145 * 7018 5419 5319 * 3878 * 2883 58 0 * * * * * * 7144 0 0 T 59 1277 2661 * * * * * 6593 6751 5201 2738 * 6721 6314 * 3935 3090 5172 * * 59 0 * * * * * * 7144 0 0 E 60 5257 * 4349 2710 * * 5757 4013 2081 4568 6771 4475 * 3630 2837 5156 4111 4258 * * 60 14 6742 * 2322 322 * * 7144 1000 0 H 61 4279 5922 5762 4056 * 4887 1161 * 3616 6355 6993 4294 * 5620 4132 4086 7525 * 6406 3913 61 17 6448 * 2322 322 * * 7144 1000 0 A 62 2522 6523 3824 3082 6587 3185 5541 * 5191 * * 3982 * 5192 2730 2277 6740 * * * 62 14 6721 * 0 * * * 7144 1000 0 K 63 5583 * 4885 * * 2352 4789 * 1307 * 5839 3542 * 4592 3087 4721 6839 * * * 63 0 * * * * * * 7144 0 0 R 64 5610 * * * * * * * 3017 6434 * * * * 441 3468 * 5847 * * 64 0 * * * * * * 7144 0 0 K 65 4701 * 3980 6761 * * * 6686 1096 6756 * 5078 6314 3836 2893 4223 4138 4471 * * 65 14 6721 * 0 * * * 7144 1000 0 T 66 5822 * * 7028 * 6499 * 5686 3445 5790 5683 4923 * 4614 4573 6877 614 4757 * * 66 0 * * * * * * 7144 0 0 V 67 * * * * 5289 * * 1172 * 2097 4883 * * * * * * 1927 * * 67 0 * * * * * * 7144 0 0 T 68 4721 * 3551 3610 * * 6873 * 3203 3937 4348 3531 * 5047 5289 2948 1838 * * 6405 68 0 * * * * * * 7144 0 0 A 69 2382 5769 6874 4577 4385 4143 6405 4636 4014 4866 5424 * 2890 * 5972 4891 2888 3073 * 5319 69 0 * * * * * * 7144 0 0 M 70 4872 * 2748 2234 * 5283 * 5289 2656 * 6804 4549 5789 3011 3743 3558 4599 * * * 70 0 * * * * * * 7144 0 0 D 71 * * 227 * * * 3090 * * * * * * * * * 5144 * * * 71 14 6742 * 1585 585 * * 7144 1000 0 V 72 * * * * 6555 * * 1416 * 4132 4191 * * * * * * 1032 * 6188 72 0 * * * * * * 7144 0 0 V 73 4446 5469 4233 4084 4459 * * 2911 3889 2188 5031 3461 * 2931 5707 5762 5715 4770 * 6908 73 12 6906 * 0 * * * 7103 1000 0 Y 74 4189 * 6703 4613 4177 4507 4968 * 3689 2123 5003 4863 * 3746 3479 3766 4886 5083 4941 4125 74 0 * * * * * * 7103 0 0 A 75 707 5110 * * 5829 5425 3880 5911 * 3933 * * * * * 3971 5026 4094 * 6080 75 0 * * * * * * 7103 0 0 L 76 5975 5265 * * 4705 * * 3523 * 673 3222 * * * 6523 5106 6376 4423 * * 76 36 5803 7236 0 * * * 7101 1448 0 K 77 4201 * 4120 2165 * 4921 6387 * 1925 6449 6627 5709 * 3700 2617 4060 5944 * * * 77 60 4626 * 0 * * 0 7100 2156 1000 R 78 5100 * 3410 4228 * 4859 5132 6058 3927 3793 * 5272 * 6175 1131 4347 * 4346 6271 * 78 37 5302 * 0 * * 0 7094 1486 1000 Q 79 4698 * * * 3793 6032 * 4095 4025 1536 4119 3856 * 3383 4569 5301 6229 5631 * 3543 79 80 4708 5977 0 * 0 * 7036 1402 1000 G 80 * 5951 3450 * * 688 * 5911 * 4792 * 2555 * 5612 * * * 5144 * * 80 276 2523 * 1089 917 * 0 6617 3215 1000 R 81 * * 4806 1847 2555 * 5452 3313 4252 3703 3615 4573 * 4231 4562 * * 5501 * 5502 81 34 5432 * 0 * * 0 6672 1000 1000 T 82 4438 5443 4369 3542 * 5830 5410 5759 3847 * 5352 3728 1608 4763 3598 4534 4287 * 5281 * 82 0 * * * * 0 * 6458 0 1000 L 83 5029 * 4040 4242 * * 4737 2588 * 2035 4555 * * 4597 5095 3676 * 3263 * 3152 83 0 * * * * * * 6418 0 0 Y 84 * * * * 3855 * 5232 3544 * * * * 3305 * * * * * * 479 84 0 * * * * * * 6310 0 0 G 85 * * * * * 58 * * 4666 * * * * * * * * * * * 85 0 * * * * * * 5602 0 0 F 86 * * * * 975 * * * * * * * * * * * * * * 1026 86 0 * * * * * * 4941 0 0 G 87 2560 * * * * 268 * * * * * * * * * * * * * * 87 0 * * 0 * * * 2940 0 0 //