HHsearch 1.5 NAME c9jj8C_ FAM FILE c9jj8C_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9jj8C_.a3m DATE Sat Aug 23 09:12:50 2025 LENG 80 match states, 80 columns in multiple alignment FILT 120 out of 3012 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.2 EVD 0.4602 -0.0155 SEQ >ss_pred CCCEEECCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEECHHHCCCCCCCHHHCCCCCEEEEEECCCCCHHCCCCCC >ss_conf 94259867578756039978999779931545556640467625556788880454198874788870431010037649 >Consensus xxxvxxxdxCixCxxCxxxCPxxaixxxxxxxxxxxxxxxxxxxxxCxxCgxCxxxCPxxAixxxxxxxxxxxrxxglxx >c9jj8C_ SHSVRVYDTCIGCTQCVRACPCDVLEMVPWDGCKAGQIASAPRAEDCIGCKRCETACPTDFLSVRVYLGSETTRSLGLTY >UniRef50_A0L9R3(44-114:598) FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Proteobacteria RepID=A0L9R3_MAGSM E=0.0002 s/c=0.66 id=26% cov=82% -------EKCIGCGTCEAICQNGAIDMVENRDVPGNRSDSGLRPRidygRCCWCALCVDVCMTSSLTMsNAYQWVDS-------- >UniRef50_C0ZQ40(4-73:574) Putative ferredoxin--NADP(+) reductase n=5 Tax=Actinobacteria (class) RepID=C0ZQ40_RHOE4 E=4e-11 s/c=0.99 id=24% cov=88% -----ITQSCCNDAACVVVCPANCIHPTPDEPDYARTEILYIDPRSCVDCGACIQACPVDAIVPHDELTPQTIR------ >UniRef50_B8GGF2(134-209:272) Ferredoxin n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GGF2_METPE E=7e-09 s/c=0.81 id=26% cov=91% -------NRCVLCGLCVRAChelmGAGAINFINRGAYTVVNTPFFEANPVCLGCGACARVCPTDAVRIEDIDGERVMQSWGST- >UniRef50_B7CAH2(365-417:436) Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAH2_9FIRM E=0.0007 s/c=0.85 id=25% cov=64% ---------CLRCGKCSDHCPSGLQPVRITAALKANDVDEMSKRgvMSCIECGMCTYICPS--------------------- >UniRef50_C2FWJ9(74-158:189) Possible NADH dehydrogenase i subunit n=2 Tax=Sphingobacterium spiritivorum RepID=C2FWJ9_9SPHI E=5e-08 s/c=0.69 id=24% cov=92% -------DDCIVCDLCAKACPVDCIDILsikspeaigktsDGSVKRLYAEKFDIDMAKCMYCGLCTVVCPTECITMTNQYDRSTSKLTDLIY >UniRef50_D1YYX9(200-268:363) Tungsten-containing formylmethanofuran dehydrogenase subunit F n=1 Tax=Methanocella paludicola SANAE RepID=D1YYX9_METPS E=0.0003 s/c=0.67 id=26% cov=81% ---------CDACKVCVEICPEDALQIERKILEEPKLKGKVdIDLEKCTTCSWCQVICPQEAAKVEKLFEGELT------- >UniRef50_UPI0001C42000(48-123:483) energy-converting hydrogenase A subunit Q EhaQ n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C42000 E=5e-07 s/c=0.73 id=22% cov=86% ---IKLDEHCFGCVLCSNACPYDAIHIKKTLSEPIRENVPNINKKLCRACGACVNACKSGAIHLKSTGGEE--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 1030 970 * * * 1 0 * * * * * * 2574 0 0 H 2 * * * 1517 * * 620 * * * * * * * * * * * * * 2 0 * * * * * * 3185 0 0 S 3 1931 * * * * * * * * * * 2988 * * * 1455 * 2018 * * 3 0 * * * * * * 3714 0 0 V 4 3804 * * * * * * 2217 * 3873 * * * * * * * 633 * * 4 0 * * * * * * 4862 0 0 R 5 * * * 3960 * * 3993 2759 2648 * 4312 * * * 1653 4502 * 3290 4298 * 5 0 * * * * * * 5399 0 0 V 6 3637 * 2405 * 4918 * * 2138 * 2875 * 4850 4582 * * * 4645 2198 * * 6 0 * * * * * * 5846 0 0 Y 7 4937 * 2736 4070 4878 4913 4069 * 3425 3824 * * 3908 4753 * 5159 3788 * * 1926 7 93 4005 * 552 1652 * * 6106 1421 0 D 8 6117 * 1380 1702 * 6235 * * 6218 * * 2192 * 5819 * 5028 * * * * 8 0 * * * * * * 7429 0 0 T 9 4315 * 6620 5348 4460 * 6142 4349 2126 2929 6323 4554 6112 4861 2655 3668 3410 6579 * * 9 0 * * * * * * 7477 0 0 C 10 * 0 * * * * * * * * * * * * * * * * * * 10 0 * * * * * * 7774 0 0 I 11 5894 6332 4835 * 5816 * * 1179 3846 4251 5014 6024 * 6591 5286 5269 2667 3847 * 5720 11 10 7134 * 2585 263 * * 7774 1000 0 G 12 3759 * 6595 4672 6017 1640 4587 * 3887 3997 5838 4047 * 3589 3237 4812 5454 4944 * 6595 12 11 6998 * 2322 322 * * 7774 1000 0 C 13 * 35 5396 * * * * * * * * * * * * * * * * * 13 0 * * * * * * 7774 0 0 T 14 3916 * 4808 4385 5819 1364 4834 * 3653 5969 4865 3546 * 5829 4500 4217 4280 6646 * 5914 14 0 * * * * * * 7774 0 0 Q 15 2639 * 5919 4465 5706 * * 3684 3522 3000 4618 4156 * 5019 2967 4761 3541 3967 * 5246 15 44 5063 * 1000 1000 * * 7774 1787 0 C 16 * 0 * * * * * * * * * * * * * * * * * * 16 0 * * * * * * 7778 0 0 V 17 2532 6773 7219 3827 5275 6883 * 3063 5926 4421 5159 * * 6911 5046 4138 3493 1882 * 4636 17 0 * * * * * * 7778 0 0 R 18 4089 * 3514 3549 5266 * 5767 4795 2890 5255 4158 3393 6154 4168 3044 6306 3570 3921 * 5523 18 0 * * * * * * 7778 0 0 A 19 1884 * 5686 5442 5349 * 7136 3331 5797 5502 4176 5210 * * 6883 3662 4270 1904 * 5225 19 18 6303 * 2000 415 * * 7778 1000 0 C 20 * 32 * * * * * 6754 * * * * * * * * * 6303 * * 20 93 4241 6681 2156 367 * * 7778 3190 0 P 21 4979 * 5072 5227 * 3940 6635 * 5694 5355 * * 463 4813 6647 5521 * * * * 21 57 4690 * 964 1037 0 * 7761 2707 1000 C 22 3179 4021 4083 4718 4833 6773 4991 6822 4903 4628 3981 4718 4650 5316 4930 4963 3776 2674 * 3161 22 79 4420 7207 2494 282 * * 7778 2846 0 D 23 4161 6389 2837 4047 6884 2076 3520 * 4069 * 6829 2989 5167 4283 5677 3782 6591 * * 5457 23 45 6865 5512 2000 415 * 0 7775 1000 1000 V 24 1341 3974 * * * 5283 * 3236 * 3815 * 5032 5885 * 6678 4845 6493 2085 * * 24 124 3973 5750 2290 330 1934 438 7768 3457 2375 L 25 6672 * 5781 * 4243 * 6203 1227 5287 2069 4981 6736 4801 5687 6707 5612 6960 3816 * 6789 25 51 5173 7111 2646 251 * 0 7735 2232 2744 E 26 5283 6329 3720 2445 6055 5146 4534 * 3479 6067 6529 5177 4480 3697 3587 3985 2954 4374 * 5200 26 132 4091 5129 2152 368 2449 292 7716 3094 3042 M 27 4218 * 5829 4683 3718 * * 2743 4568 2947 2400 * 3529 5581 6741 * 6061 3227 5109 4818 27 58 6170 5310 2991 194 1918 444 7693 1602 3356 V 28 4012 * 3501 3282 5865 4745 * 3960 3575 3955 6736 6600 4939 3850 5806 3747 3446 2736 * 5378 28 48 5966 5878 2888 209 2698 241 7655 1636 3509 P 29 4152 * 3548 2942 * 4334 6957 4852 2825 4561 6578 4057 3057 4972 4270 4749 4965 4816 5115 4494 29 10 7109 * 2585 263 * 0 7660 1000 3852 W 30 3679 6298 3281 3751 4907 3930 5495 4573 3040 3848 5954 5773 5160 4048 3673 4898 4591 4604 5852 4533 30 63 6808 4882 0 * 1537 609 7660 1000 3852 D 31 4866 * 3009 3235 4699 3165 6490 4632 3005 3644 6820 5821 4045 5146 3983 3828 4963 6937 6292 5198 31 31 * 5561 * * * 0 7652 0 3986 G 32 3627 6710 3975 3519 5500 2815 3469 * 4718 3972 * 4237 4554 4754 4174 3408 4638 4953 5134 5702 32 64 5381 5679 824 1200 3279 157 7646 2041 4336 C 33 3348 7132 4458 2824 4999 3207 5036 5138 3301 4515 6611 4391 3402 5571 4218 4019 6372 4448 * 5839 33 54 5112 6957 2587 263 2127 375 7646 2130 4422 K 34 4165 * 3624 3773 4696 3882 * 4072 3325 4403 6601 3335 4385 6773 3186 4958 3985 3797 6493 5473 34 65 4815 6893 3488 135 1819 481 7675 2534 4020 A 35 3440 * 5594 5775 5643 2383 5027 4034 2664 4176 6577 5082 4264 5764 3305 4502 4729 4635 * 5739 35 29 5632 * 3791 108 * 0 7686 1637 3657 G 36 4081 * 4195 4451 3851 2538 4368 5068 2851 5779 5207 4220 5354 5174 4204 5245 4254 4673 5290 4907 36 34 6024 7003 1943 435 3298 155 7686 1692 3657 Q 37 5506 5187 3766 3157 4964 4765 5733 3542 3706 4835 4864 4235 4218 5198 4316 3870 3734 3775 6527 4890 37 11 6990 * 0 * 1270 773 7692 1000 3450 I 38 5313 * 3503 3673 5377 4306 4932 3515 2636 3958 6020 5593 3791 5339 4177 4283 4258 4250 * 4520 38 43 5520 7072 2973 197 903 1104 7728 1707 2718 A 39 2741 7019 5276 4724 * 5347 6939 4442 3950 4455 3974 5011 3391 5201 4100 3956 3672 2937 * 4604 39 63 6102 5160 580 1596 * 0 7731 1687 1956 S 40 3823 5227 3727 4421 3832 5528 6662 3924 3174 4267 6012 5290 3216 5659 4652 3659 4310 4606 4522 5175 40 36 6849 5940 1000 1000 3023 189 7705 1000 3055 A 41 3544 6803 4513 3870 5916 3627 4915 4676 3799 4200 5701 5344 3796 5263 4598 3820 4740 2863 6654 4099 41 81 4713 5921 2955 199 642 1477 7720 2607 3604 P 42 4259 * * 5337 3328 6469 4719 2229 5333 3362 5714 4974 4190 4536 6705 5898 3925 2804 * 4193 42 32 5525 * 3500 134 1763 504 7750 2156 2386 R 43 6031 6030 1816 4948 5748 5329 3533 6988 3522 4505 6141 3255 5590 4385 3555 5222 5024 5366 5717 6551 43 38 5257 * 711 1363 1403 685 7745 2305 2018 A 44 3983 5180 4461 3518 5894 4419 6883 4087 5746 4041 4906 4172 2807 4674 4891 4159 3976 4134 5991 3848 44 46 4990 * 2853 215 * 0 7749 2597 1600 E 45 4725 * 2432 2533 5502 3448 5373 4550 4692 4381 4841 4089 5141 5381 4628 3702 5942 5869 4984 6857 45 46 5003 * 1350 719 976 1025 7749 2611 1600 D 46 3851 6885 2948 4732 * 4666 3909 6850 2784 3396 6980 4643 6499 4251 3074 4243 6035 3885 * 4875 46 106 3820 * 3027 189 0 * 7749 3539 1000 C 47 * 93 * * * 4832 * * * 6289 * * * * * 6120 * * * * 47 85 4597 5982 1774 499 * * 7758 2862 0 I 48 6894 5184 5775 4231 6823 6715 4610 2227 4544 3275 5213 4947 * 5859 5852 5692 2935 2663 4827 4782 48 48 4946 * 2520 276 0 * 7723 2338 1000 G 49 3969 * 4287 3543 4087 2040 4600 5901 5283 3796 5171 4218 * 5276 4331 3313 6104 * 6652 4075 49 42 5761 6599 980 1020 * * 7758 1670 0 C 50 5645 79 * * * 5695 * 6189 * * * * * * * * * * * * 50 0 * * * * 0 * 7757 0 1000 K 51 4034 * 6829 4867 6762 911 5971 * 5263 5042 4537 4255 4234 4719 4703 5234 5835 * * 6192 51 0 * * * * * * 7758 0 0 R 52 2164 5858 5460 4149 5955 * 6092 4536 3741 2763 5805 4657 * 4189 3560 4344 4388 4363 6958 4886 52 38 5261 * 1000 1000 * * 7758 1847 0 C 53 * 0 * * * * * * * * * * * * * * * * * * 53 0 * * * * * * 7758 0 0 E 54 2972 * * 3205 * 5365 * 2941 * 4782 5069 6725 * 4402 4490 4059 3977 1792 6876 5540 54 0 * * * * * * 7758 0 0 T 55 3422 6597 2716 2323 6782 5345 5695 4883 4498 4248 6807 5802 * 3508 4025 4868 4252 4668 * 4101 55 0 * * * * * * 7758 0 0 A 56 1965 * 6580 4292 4422 7083 6676 3385 5021 4477 5841 5711 * 5478 5743 5469 4936 1788 * 5343 56 0 * * * * * * 7758 0 0 C 57 * 0 * * * * * * * * * * * * * * * * * * 57 0 * * * * * * 7758 0 0 P 58 * * 5556 * * * 5751 6797 5860 * 6652 6298 192 6652 * 5769 * 7001 * * 58 0 * * * * * * 7758 0 0 T 59 3811 * 4342 3893 4394 * * * 5072 * 5831 4650 * 4413 5698 3293 1968 2211 5787 5673 59 44 5059 * 491 1794 * * 7502 1711 0 D 60 5849 * 2386 3227 6651 2148 6641 * 3553 6594 * 2398 * 4085 5199 4727 5069 * * * 60 16 * 6541 * * * * 7557 0 0 F 61 548 4903 * * 6856 6516 * 3408 4965 5749 * 5309 6582 * 5597 5573 * 5063 * 6535 61 30 5617 * 695 1388 * 0 7510 2042 1000 L 62 5719 * 6428 * 6582 * * 1341 4932 1510 5237 * 3330 * 6503 * * 4859 6788 * 62 73 5028 5744 1344 723 * 0 7510 1650 1000 S 63 3932 6792 3674 5689 * * 5393 4625 3635 3680 6665 6273 7154 3765 4208 2150 2925 4060 * 5035 63 45 5807 6297 1591 582 1645 556 7459 1634 1940 V 64 4130 * 8220 4917 4640 6441 * 2598 * 2740 3273 6414 4915 * 6851 * 4092 1883 * 4232 64 165 4149 4280 906 1101 508 1751 7437 2791 2017 R 65 * * 3975 3037 6305 5194 5540 6156 2477 4415 * 3895 5432 4671 1747 5779 4763 5056 * * 65 51 6194 5547 0 * 710 1364 7320 1000 2814 V 66 4416 * 3890 6204 * 6015 4135 3380 3675 3511 * 4051 4295 5539 4684 3664 3566 2776 * 4141 66 0 * * * * 525 1713 7312 0 2046 Y 67 3935 * * 4395 2701 6247 3352 4556 4614 3553 6090 * 4516 6224 5240 6320 5169 4783 * 1843 67 49 * 4908 * * * 0 7385 0 1000 L 68 5137 * 5132 5845 3495 4983 * 3804 4836 2014 3662 5646 5002 4268 4374 5060 3455 3585 * 5930 68 50 * 4883 * * 1596 580 7362 0 2104 G 69 3145 * 5849 3516 * 2016 * 4811 5531 4290 * 3793 5867 5985 2998 * 4535 5947 3051 5935 69 0 * * * * 440 1929 7290 0 2510 S 70 3324 * 4895 2529 * 3766 3569 5279 4133 4523 * 3846 4194 4178 5470 2985 5955 4941 * 4951 70 0 * * * * 0 * 7362 0 1000 E 71 4079 * 3884 2038 * 6052 5782 * 2693 5750 5932 5580 4569 2754 3925 4908 4329 4425 * * 71 0 * * * * * * 7357 0 0 T 72 4875 * 5125 4822 4486 * * 3159 5963 3920 4628 5543 * * 3486 3089 1957 3123 5493 * 72 0 * * * * * * 7313 0 0 T 73 2838 * 5235 3585 5447 4279 5498 3821 4642 5085 5577 5499 * 5665 * 4633 1855 4115 * 3713 73 0 * * * * * * 7171 0 0 R 74 3927 * * 4260 * 3828 5452 * 2418 * * * * 3885 1104 4762 * 4980 * * 74 0 * * * * * * 6950 0 0 S 75 2063 * 5095 4889 * 5076 * * 2271 5047 * 3923 * 5104 3017 2446 5132 * * * 75 0 * * * * * * 6558 0 0 L 76 2344 * 3961 4592 * 4067 * 2937 * 3976 3447 * 4121 5039 4772 * 3853 3399 3979 * 76 0 * * * * * * 6448 0 0 G 77 3937 * 4548 * 4628 571 * * * * * 3205 * * 3838 * * * * * 77 0 * * * * * * 6033 0 0 L 78 3991 * * * * * * 4279 * 750 * * * * * 4077 * 2687 * 3711 78 0 * * * * * * 5303 0 0 T 79 1317 * * * * * 3604 3673 * 3095 3807 * * * * * 2002 * * * 79 0 * * * * * * 4706 0 0 Y 80 * * * * * * 2585 * * * * * * * * * * * * 263 80 0 * * 0 * * * 3382 0 0 //