HHsearch 1.5 NAME c9ikiS_ FAM FILE c9ikiS_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9ikiS_.a3m DATE Sat Jul 5 09:54:39 2025 LENG 91 match states, 91 columns in multiple alignment FILT 68 out of 70 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.4321 0.8592 SEQ >ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEECC >ss_conf 9777788784322659999998649984230131578987558718642798158974188535712889994498624777886889779 >Consensus ggxipxdxExATGlErxelxaxxxGxDpfdxxxxxxxxGTkexPxiVpSxxdxRiVGCxxxxDxxxixwxxlxxgxpxrCpeCGxxfkLvp >c9ikiS_ GGGVPTDEEQATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWLHKGEAQRCPSCGTHYKLVP >UniRef50_C8TDR9(44-121:220) Cytochrome c oxidase subunit, putative n=2 Tax=Apicomplexa RepID=C8TDR9_EIMTE E=7e-20 s/c=1.26 id=29% cov=82% --------------ENQHMVGLLELYEYLKTAPFVGPFGTTQNPVLVPSVHTERIVGCTGgtGEDEHYPLWFRCREGFLYRCGECDQIFM--- >UniRef50_A0DGA7(1856-1940:2436) Chromosome undetermined scaffold_5, whole genome shotgun sequence n=8 Tax=Paramecium tetraurelia RepID=A0DGA7_PARTE E=7e-14 s/c=0.92 id=34% cov=80% -----------------EYYAAYSGN-PFHLQVYNNldniqtvNFGTVDNPCVIFTADtPFRYVGCTGlqnEDDyeQHEIHLFMLREGPLQRCPMCGQVF KLV- >UniRef50_C1ECE2(33-108:124) Predicted protein n=2 Tax=Micromonas RepID=C1ECE2_9CHLO E=8e-19 s/c=1.25 id=37% cov=84% ---VSTDWEHATGLELKELQAAAEGKDFFDHyDFLKQPNGTKESPVVVTSSMPYRVVGATDPDDDTIVHWGRVEAGKPP------------- >UniRef50_Q2UEE5(63-155:208) Cytochrome c oxidase n=2 Tax=Aspergillus RepID=Q2UEE5_ASPOR E=2e-27 s/c=1.32 id=35% cov=100% AGTVPSDIEQATGLERLELVGKMQGIDIFDMRPLDASRkGTLENPIIVNGAGDEQYAGCTGfPADSHTVNWLTVSRDRPiERCGECGNVVKLN- >UniRef50_D0NKH5(26-115:133) Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NKH5_PHYIN E=2e-19 s/c=1.07 id=35% cov=97% -GGIPNDLEHAVGRERQELDAAEIGVTQFNRDPLESdenQGNSKDDPILVPSFNDVRTVG-VSHNDASYLYWFNMEKGKVHYLPEIEKYFML-- >UniRef50_C4Q309(68-139:220) Expressed protein n=3 Tax=Schistosoma mansoni RepID=C4Q309_SCHMA E=3e-14 s/c=1.10 id=29% cov=80% ----------------EDLIAEISEVEP-DTSRGEIKSSTKENPNLVASSNVRAVQQCHCSPHDHHLKSLVLYRNLPARCF-CGHWFLLV- >UniRef50_P29505(44-108:120) Cytochrome c oxidase subunit 5 n=1 Tax=Dictyostelium discoideum RepID=COX5_DICDI E=5e-13 s/c=1.16 id=24% cov=68% ----------------------------FGHEVLTGAFGTLKSPVIVESIFHSRIVACEGGDgEEHDILFHTVAEKKPTICLDCGQVFKL-- >UniRef50_D2VFR7(66-160:196) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFR7_NAEGR E=2e-13 s/c=0.80 id=25% cov=93% ---LPTVFERAVGSERAELLDPTLFDDhlPEVVDIESGVGSSLFNPIIVASRGePERVVGCLGEcwkandidYHTTDMQFWVMKENTFSVCDECGLIF-- -- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 1686 * * * * 537 * * * * * * * * * * * * * * 1 0 * * * * * * 3286 0 0 G 2 * * * * * 279 * * 5293 * * * * * 3936 4497 4619 * * * 2 0 * * * * * * 3839 0 0 G 3 * * 4348 2573 * 1826 * * 3793 * * * * * 2326 5382 2542 * * 4900 3 0 * * * * * * 3880 0 0 V 4 * 4372 * * 5503 * * 1370 * 3838 3704 * * * * * * 1611 * 3859 4 0 * * * * * * 4064 0 0 P 5 5013 * * * 5682 * * * * * * * 366 * * 3530 4553 5162 * 5907 5 0 * * * * * * 4064 0 0 T 6 * * 1725 * * * 4428 * * * * 3783 5206 * * 3641 1086 * * * 6 0 * * * * * * 4078 0 0 D 7 4112 * 894 5350 * * * * * * * 3714 2376 * * * * 3940 4460 * 7 0 * * * * * * 4117 0 0 E 8 5381 * 3995 2640 3554 * * 4931 * 1417 6322 * * * 5959 5095 4204 * 3295 4432 8 0 * * * * * * 4117 0 0 E 9 * * 4174 324 4258 * * * * * * 5498 * 3806 * * * * * * 9 55 4740 * 0 * * * 4126 1000 0 Q 10 * * * * * * 2028 5471 * 2919 * 5405 * 1106 3974 * * * * 4373 10 0 * * * * * * 4126 0 0 A 11 227 * * 4316 * * * * * * * * * * * 4084 * 4770 * * 11 0 * * * * * * 4284 0 0 T 12 6207 5443 * 4839 * * * * * * * * * * * * 328 2920 * * 12 0 * * * * * * 4284 0 0 G 13 * * * * * 51 * * * * * * * * * 4839 * * * * 13 0 * * * * * * 4284 0 0 L 14 * * * 4807 4784 * 4513 3346 4412 944 4024 * * * 3830 4206 5904 5936 * * 14 26 5808 * 0 * * * 4284 1000 0 E 15 4945 * 4842 308 6098 * * * 4283 * * * * 4608 * * * * * 5816 15 44 5055 * 1173 845 * * 4347 1302 0 R 16 * * * 7516 * * * * 1680 5661 * 5055 * * 661 * * * * * 16 19 6225 * 0 * * * 4347 1000 0 E 17 3375 * * 2331 3217 * * 4286 2732 2838 * * * 3839 3297 * * * 4920 4291 17 0 * * * * * * 4448 0 0 V 18 * * 4923 524 * * 4517 6401 * 3806 5877 * * 3749 * * 6295 4635 * * 18 0 * * * * * * 4486 0 0 M 19 4940 * 6316 * 5921 * 5489 3587 * 742 2324 * * * * * * * * 4833 19 20 * 6169 * * * * 4486 0 0 L 20 5364 * 2783 3451 * * * 3811 6248 1222 4733 * * 4511 * * * 3212 * 4779 20 30 * 5616 * * * 0 4471 0 1000 A 21 984 * 4717 5307 5973 2039 * 6304 6482 4288 * * * 4928 5034 5801 * * * 5986 21 24 * 5897 * * * 0 4481 0 1567 A 22 2191 4874 6080 3030 * * 6866 4658 2356 3808 3755 4545 4703 5969 3439 * 5002 * * * 22 0 * * * * * 0 4483 0 1989 R 23 2719 * * 3542 * * * 4346 2933 1582 3505 * * 4796 4928 5969 4703 5933 * 5612 23 0 * * * * 573 1609 4483 0 1989 K 24 2174 * * 2133 * 4140 5970 4633 3031 4279 * * * 2854 * 3822 5479 4953 * * 24 0 * * * * * 0 4480 0 1000 G 25 * 5958 * 4903 4074 270 * * * 5549 * 4638 * * * * * * * * 25 59 4632 * 0 * * 0 4492 1559 1000 Q 26 5773 * 2898 3425 * * * 3269 3844 5352 * 2273 * 5505 4158 * 5041 2463 * 4066 26 351 2344 5698 0 * 0 * 4492 2687 1000 D 27 * * 403 3239 * * * * 4705 6244 * 6512 * * 5299 * 4323 * * * 27 86 4106 * 516 1733 0 * 4492 1884 1000 P 28 5892 * * * 5755 * * 4261 * 3964 * * 938 4762 3551 * * 2636 * 4520 28 125 4293 4961 497 1778 * * 4515 1622 0 Y 29 * * 6388 4091 633 * * * * 3607 * * * * * * * * 4380 2696 29 0 * * * * 0 * 4467 0 1000 N 30 * * 932 3949 5796 4076 5648 * 4494 4414 * 3442 * 6187 5990 3725 * 5288 * * 30 0 * * * * * * 4737 0 0 I 31 6316 * 5095 6208 5967 * 4193 3849 * 2796 1431 * 5925 4965 4747 5461 2975 4204 * * 31 75 4296 * 0 * * * 4733 1860 0 L 32 4804 * 2799 3419 * * 4354 * 1827 4128 * 3832 * 5647 3316 3173 6208 * * 5372 32 131 3522 * 1174 845 * * 4733 2345 0 A 33 3615 * * * 3969 5402 6201 4058 4608 5783 5986 * 1272 * 4044 6540 6108 2890 * 4402 33 24 5943 * 0 * * * 4733 1000 0 P 34 5975 * * 5260 3342 4891 5505 3276 5779 1679 6013 6611 2264 * 6190 * * 4204 * 3879 34 40 5209 * 0 * * * 4841 1454 0 K 35 * * 2715 2413 * * * 6311 1857 * * 4794 5069 5782 3146 4068 4038 4216 * * 35 61 4584 * 1787 493 * * 4856 1587 0 A 36 2861 * 6203 4877 * 1713 * 3376 6897 5930 5806 5616 5364 5430 2731 2949 6645 6277 * * 36 86 4109 * 2154 367 * * 4820 1634 0 T 37 4541 * * 4134 * 2417 6073 * 4086 * * 5616 1894 4734 * 2651 4029 4145 * 4823 37 41 5148 * 0 * * * 4820 1344 0 S 38 3265 * * * 2279 3609 5706 5309 4176 6501 * 5060 3146 * 2591 3147 5544 4871 5663 * 38 309 2375 * 0 * * * 4760 2307 0 G 39 * * * * * 308 * * * * * 4095 * * * 2905 * * * * 39 0 * * * * * * 4760 0 0 T 40 * * * * * * * 5309 * * * * * * 4571 2760 349 * * * 40 28 5717 * 2807 222 * * 4760 1000 0 K 41 5630 * * 3750 * 4468 * 4867 1158 3141 3711 * * * 3781 * 4878 3620 * * 41 0 * * * * * * 4782 0 0 E 42 4522 * 2302 1061 4550 * * * 4380 5642 * 4285 * 3976 * * 5128 5630 * * 42 0 * * * * * * 4782 0 0 D 43 3656 5241 1857 4421 * * * * 4379 * * 1464 * * * 2735 6542 * * * 43 67 4468 * 2183 359 * * 4782 1563 0 P 44 * * * * * * * * * * * * 0 * * * * * * * 44 0 * * * * * * 4782 0 0 N 45 3663 4597 * * * * 4414 1701 * 6217 * 2128 * * 4494 6395 3730 3356 * 4216 45 0 * * * * * * 4782 0 0 L 46 * * * 4404 * 5630 * 1846 4580 1525 4314 * 5911 * 4984 6387 * 2885 * 5691 46 0 * * * * * * 4782 0 0 V 47 * * * * * * * 2183 * * 4984 * * * 5691 * * 456 * * 47 26 * 5822 * * * * 4782 0 0 P 48 3689 * 4949 3553 4018 * 5713 * 3812 * * 5809 972 4997 4880 * 4521 * * 5915 48 19 6256 * 0 * 0 * 4740 1000 1000 S 49 4275 * * * * 5794 * * * * * * * * * 210 3921 * * * 49 0 * * * * * * 4782 0 0 I 50 2497 5269 5977 6217 3781 5125 3787 3678 * 3697 4754 6543 * 5642 4550 4590 4485 4358 * 2373 50 0 * * * * * * 4782 0 0 T 51 3638 6084 3106 6017 2373 3044 4850 5492 * 5369 4230 3544 * * * 4423 4958 5371 5681 3101 51 60 4619 * 0 * * * 4782 1675 0 N 52 6017 * 1262 2881 * 5492 4582 * 4924 * * 4820 2616 5217 * 5241 4477 4713 * * 52 29 5648 * 0 * * * 4782 1000 0 K 53 4165 6325 * 1598 3445 5397 * 5822 2737 * * * * * 3823 3780 * 4642 * 2894 53 38 5275 * 1000 1000 * * 4782 1000 0 R 54 5203 * * * * * * * * * * * * 3527 174 * * * * * 54 0 * * * * * * 4782 0 0 I 55 * * * * * * 5981 1431 * 4657 3768 6124 * 5911 * 5822 4642 2261 * 2301 55 0 * * * * * * 4782 0 0 V 56 4471 * * * * * * 2363 * 4793 * * * 5203 * * * 520 * * 56 0 * * * * * * 4782 0 0 G 57 4274 5632 * 4984 * 277 * * * * * * * 4480 * * * * * 5241 57 135 5822 3803 0 * * * 4782 1000 0 C 58 4828 137 * * * * * * * * * * * * * 4663 * 5957 * * 58 0 * * * * 0 * 4620 0 1689 I 59 * * * 5525 5977 * 4480 2286 5492 3929 5984 * 3665 * 6124 4395 1728 2589 * * 59 0 * * * * * * 4782 0 0 C 60 * 1415 4543 4984 * 1119 * * * * * * * * 5275 4642 * 5371 * * 60 719 1450 5241 626 1507 * * 4782 3212 0 E 61 * * 4662 1417 * 2583 4612 * * 4653 * 5741 1960 * * 3996 * * * * 61 87 4099 * 3695 116 0 * 4737 1742 1000 E 62 2553 * 2876 1490 * 5397 * * * * * 4642 2535 5984 * 5275 * 5911 * 4550 62 32 5525 * 0 * * * 4782 1000 0 D 63 * * 599 2839 * 5165 3134 * * * * 5632 * 5492 * 5981 * * * * 63 46 4993 * 1000 1000 * * 4782 1184 0 N 64 2941 * 3150 2622 * 3835 * * * * * 4438 * 4090 4686 1678 4550 * * 5275 64 22 * 6049 * * * * 4782 0 0 S 65 * * 5621 5354 5483 5851 1178 * 5267 * * * * * 5814 2969 1929 5230 * 6300 65 71 4389 * 743 1313 0 * 4770 1552 1000 T 66 3327 * 1997 4993 5059 * 3781 5187 5492 5033 6209 3389 4552 5630 * 4517 4068 4152 * 3263 66 35 * 5397 * * * * 4782 0 0 V 67 * * * * * * 5208 1712 * 3357 4538 * 2960 * * * 3775 1620 * * 67 0 * * * * 0 * 4781 0 1116 I 68 * * * 6127 * * 4460 2939 3398 3130 5165 2890 * 3745 6209 6084 4168 2203 * 4005 68 0 * * * * * * 4782 0 0 W 69 * * * * 3136 4984 * * * 4885 * * * * * 5203 5241 * 544 3616 69 0 * * * * * * 4782 0 0 F 70 * * * * 1351 4543 5525 5691 * 2347 1812 * * * * * * * 4550 * 70 0 * * * * * * 4782 0 0 W 71 * * * 5642 * * 5681 4577 3152 5213 5110 3629 * * 3714 * 2646 3082 1666 * 71 0 * * * * * * 4782 0 0 L 72 * 3637 * * * * * 5016 * 786 3401 * 4567 * * * * 2539 * * 72 76 4286 * 0 * * * 4782 1512 0 H 73 5525 * 4770 2008 5028 * 2822 * 2818 * * 5681 * 6035 2757 5794 3250 * * 3768 73 0 * * * * * * 4782 0 0 K 74 4263 * 4997 1890 5486 * * * 1531 4984 * * * 4791 3079 4774 4516 6381 * * 74 0 * * * * * * 4782 0 0 G 75 * * 3297 3456 * 698 * * 5525 4792 * 3087 * * 6046 * * * * * 75 0 * * * * * * 4782 0 0 E 76 4733 * 4288 2316 4355 * 5485 * 1871 4470 * 4164 3363 4189 5059 6214 4541 5236 * * 76 22 6023 * 0 * * * 4782 1000 0 A 77 3698 * * * 4541 4982 5679 5256 * 3425 6145 5013 1035 6028 * 4469 6539 3249 * * 77 44 5059 * 0 * * * 4782 1164 0 Q 78 3631 * * 4469 4708 4982 2949 * 2732 * * * 4503 2427 3378 3939 4663 4492 * 4355 78 63 4542 * 0 * * * 4782 1409 0 R 79 * * * 3646 * 5742 * 5451 * * 5342 * * 3881 538 * * 4136 * 4624 79 0 * * * * * * 4756 0 0 C 80 * 96 * * * 5344 * * * 4644 * * * * * * * * * * 80 504 * 1761 * * * * 4713 0 0 P 81 * * 3953 * 3377 3459 * * * 4950 4450 * 988 * * 5621 6001 * 3434 4732 81 207 * 2901 * * 0 * 4553 0 2957 S 82 * * 2737 1018 * 6271 5973 * * 4093 5531 * * 4685 4263 4545 6079 3341 * * 82 40 * 5180 * * 0 * 4645 0 1968 C 83 * 188 * * * * * 4515 * * * * * * * 5280 4241 * * * 83 0 * * * * 0 * 4688 0 1000 G 84 * * 4210 4644 * 350 * * * * * 5210 * * * 4393 4424 * * * 84 0 * * * * * * 4713 0 0 T 85 5489 5648 * 4958 * * 2009 * 4184 4497 * 3277 * 2132 * 2891 4925 5222 * 4263 85 0 * * * * * * 4713 0 0 H 86 * * * * 5187 * 3820 3346 * * * * * * * * * 1724 1744 2307 86 0 * * * * * * 4713 0 0 Y 87 * * * * 604 * * * * 5471 * * * * * * * 4893 5629 1912 87 0 * * * * * * 4713 0 0 K 88 6315 * * 3184 * * * 5858 1083 4288 3339 * * 3312 6396 6520 5330 3480 * * 88 0 * * * * * * 4515 0 0 L 89 * * * * * * 5634 5751 * 193 3536 * * * * * * * * * 89 108 3787 * 1000 1000 * * 4442 1270 0 V 90 * * * * * 4049 * 3155 * * * 2431 * * * * * 640 * * 90 0 * * * * * * 3747 0 0 P 91 * * * * * * * * * * * * 0 * * * * * * * 91 0 * * 0 * * * 2507 0 0 //