HHsearch 1.5 NAME c9ii7L_ FAM FILE c9ii7L_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9ii7L_.a3m DATE Sat Jun 14 11:47:36 2025 LENG 45 match states, 45 columns in multiple alignment FILT 31 out of 33 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.2 EVD 0.4304 1.0123 SEQ >ss_pred CCEEECCCCCCCEEECCCCCEECCCCCCEEEEEECCCCEEEEECC >ss_conf 916871246883064589848802686337885002651212049 >Consensus xVxYiCgxCxxxxxlkxxdxirCxeCGxRIlYKkRtxrxvqfeAR >c9ii7L_ GVKYTCGACAHNFSLNKSDPVRCKECGHRVIYKARTKRMIQFDAR >UniRef50_C5LIS7(46-91:91) DNA-directed RNA polymerases I, II, and III 7.0 kDa polypeptide, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5LIS7_9ALVE E=1e-10 s/c=1.47 id=46% cov=102% AVTYLCGECGAYVDIKPHDAVRCRECGHRILYKLRQKqRPCVYEAR >UniRef50_A9UY90(25-63:101) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UY90_MONBE E=2e-06 s/c=1.37 id=38% cov=89% ---YVCGECRNPNQIKAGGDINCRNCGHRILYKLRTERGRSF--- >UniRef50_Q8IDR2(15-58:58) Transcription activator, putative n=4 Tax=Plasmodium RepID=Q8IDR2_PLAF7 E=3e-09 s/c=1.43 id=36% cov=100% -VVYICGECGIDTVIPPNASLRCKNCGSKIFFKKRSRRVMQYEAR >UniRef50_Q8L449(19-62:65) Os07g0105100 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q8L449_ORYSJ E=8e-09 s/c=1.39 id=40% cov=100% -VSYLCTDCGTETLLKPTDVVQCHECGCRILCKKRTRQGIVVDHR >UniRef50_Q5T909(15-58:58) Novel protein similar to polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa POLR2K n=2 Tax=Homo sapiens RepID=Q5T909_HUMAN E=2e-08 s/c=1.37 id=42% cov=100% -MAYNCRECHTENDMKSRDPVKCGECGYRIIYKKRTEILVGFDAQ >UniRef50_B2VUW1(227-281:281) Predicted protein n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VUW1_PYRTR E=4e-08 s/c=1.08 id=39% cov=98% -IVYQCVACEADVRIRGGgqlpynlsggntEMLRCRECGCRILLKK-TRRAMQFEAR >UniRef50_Q9XG44(27-70:73) DNA-directed RNA polymerases I, II and III n=1 Tax=Guillardia theta RepID=Q9XG44_GUITH E=3e-07 s/c=1.28 id=29% cov=100% -MEYICSECGMLINISDLTSLTCKSCGCRILYKKRSDEVVEYIAR >UniRef50_C1G4C4(31-59:111) Metallothionein-I gene transcription activator n=3 Tax=Onygenales RepID=C1G4C4_PARBD E=8e-06 s/c=1.78 id=48% cov=64% -VVYVCGDCNSRVSMKRGDQIRCKECGHQ---------------- >UniRef50_Q2HF65(104-146:147) Predicted protein n=1 Tax=Chaetomium globosum RepID=Q2HF65_CHAGB E=6e-10 s/c=1.52 id=34% cov=98% -VPYLCAACGVVTRFTANDMLRCVNCGGWTMHKPRVKQISQYPA- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 529 * * * * 1704 * * * * * * * * * * * * * * 1 0 * * * * * * 2084 0 0 V 2 * * * * * * * 3074 * 4512 3003 * * * * * * 489 * * 2 0 * * * * * * 3169 0 0 K 3 3144 * * 3937 * * * 4627 2655 3607 * * 3628 * 4800 3305 3207 2224 * * 3 0 * * * * * * 3177 0 0 Y 4 * * * * * * * * * * * * * * * * * * * 0 4 0 * * * * * * 3198 0 0 T 5 * * 4311 * * * * 1373 5170 1939 * 3872 * 4768 * * 4725 2918 * * 5 0 * * * * * * 3198 0 0 C 6 * 0 * * * * * * * * * * * * * * * * * * 6 0 * * * * * * 3198 0 0 G 7 2227 * * * * 771 * * * * * * * * 4551 3568 4769 4768 * * 7 75 4311 * 1585 585 * * 3198 1000 0 A 8 2794 * 2097 1231 * 4352 5045 * 4584 * * 3736 * * * * * * * * 8 0 * * * * * * 3254 0 0 C 9 * 0 * * * * * * * * * * * * * * * * * * 9 0 * * * * * * 3247 0 0 A 10 3925 * 4155 4719 * 983 3455 * * * * 3884 * * 4046 3920 * 4361 * * 10 0 * * * * * * 3247 0 0 H 11 1859 * 4361 * * * 3590 4439 4596 * 3648 3776 * 5067 * 3131 3183 3346 * * 11 0 * * * * * * 3247 0 0 N 12 * * 2242 1726 * * 5284 * 3389 3594 * 4792 3574 * 4546 5327 * 3866 * 5258 12 0 * * * * * * 3247 0 0 F 13 * * * * 3932 * 4673 4236 * 5087 * 1969 * 4731 * * 2732 1438 * * 13 0 * * * * * * 3247 0 0 S 14 * * 3952 2692 * * * 5067 * 4046 5327 4236 5227 3705 2688 2167 4371 3595 * * 14 43 5098 * 0 * * * 3247 1000 0 L 15 * * * * 3866 * * 1312 * 1153 3666 * * * * * * * * * 15 0 * * * * * * 3247 0 0 N 16 * * * 4596 * * * 4771 1090 * * 4792 3727 4166 3255 3599 3354 * * * 16 55 4731 * 0 * * * 3247 1000 0 K 17 2408 * 4236 * * 4719 5098 * 4792 * 4731 * 1775 3673 2394 4140 * * * * 17 0 * * * * * * 3247 0 0 S 18 4731 * * * * 1377 5258 * 3235 4236 * 2795 * * 3103 3919 3937 * * * 18 56 4720 * 3585 126 * * 3247 1000 0 D 19 3255 * 802 2298 * 4823 * * * * * * * * * 5057 4236 * * * 19 0 * * * * * * 3247 0 0 P 20 2717 * 4823 * * * * 4596 * 5310 3230 * 1721 4546 * 3334 5087 2602 * * 20 0 * * * * * * 3247 0 0 V 21 * * * * 5067 * * 1444 * 2088 * * * * * * * 1444 * * 21 0 * * * * * * 3247 0 0 R 22 * * * * * * * 5340 3116 * * 4823 * 3569 541 * 4236 * * * 22 0 * * * * * * 3247 0 0 C 23 * 0 * * * * * * * * * * * * * * * * * * 23 61 * 4596 * * * * 3247 0 0 K 24 * * * * * 4650 4765 * 1314 5243 * 4654 * * 1500 * 5034 3816 * * 24 0 * * * * 0 * 3203 0 1000 E 25 * * 3344 989 * * * * * * * 2080 * 4596 4731 4236 5098 * * * 25 0 * * * * * * 3247 0 0 C 26 * 0 * * * * * * * * * * * * * * * * * * 26 0 * * * * * * 3247 0 0 G 27 * * * * * 58 * * * * * * * * * * 4673 * * * 27 0 * * * * * * 3247 0 0 H 28 * 2680 * * 3671 3866 1268 * * * * * * * * 3715 * * * 2283 28 0 * * * * * * 3247 0 0 R 29 * * * * * * * * 4439 * * * * 5417 214 * * * 3866 * 29 0 * * * * * * 3247 0 0 V 30 * * * * * * * 553 * * * * * * * 4380 3819 2324 * * 30 0 * * * * * * 3283 0 0 I 31 * * * * 4350 * * 3734 * 717 2189 * * * * * * 4380 * * 31 0 * * * * * * 3283 0 0 Y 32 * 4804 * * 4350 * 3819 * * 3868 * * * * * * * * * 366 32 0 * * * * * * 3283 0 0 K 33 * * * * * * * * 0 * * * * * * * * * * * 33 0 * * * * * * 3283 0 0 A 34 3930 * * 3134 * * * * 856 3888 5285 * 3819 4156 4380 * * * * * 34 57 * 4683 * * * * 3283 0 0 R 35 * * * * * * * * * * * * * * 0 * * * * * 35 0 * * * * 0 * 3210 0 1000 T 36 4741 * * * * * * * 4479 * * * * 3799 * 2630 707 3800 * * 36 66 4479 * 1585 585 * * 3272 1000 0 K 37 * * 3418 3651 * * * * 1309 * * 3105 * * 2186 5252 5054 * * 5015 37 44 5065 * 0 * * * 3272 1000 0 R 38 * * * 4230 * * * 4649 3831 * * 4479 * 2887 692 * * * * 4741 38 0 * * * * * * 3272 0 0 M 39 4627 5700 * * * 3176 * 2977 * 2461 1869 * 3708 * * * 4708 2915 * * 39 0 * * * * * * 3262 0 0 I 40 * 4966 * 4470 * * * 2272 * * 3473 * 4453 * 4548 3311 * 1196 * * 40 0 * * * * * * 3228 0 0 Q 41 * * * 3950 * 4424 * * * * * * * 663 * 3508 * 2564 * * 41 0 * * * * * * 3168 0 0 F 42 * * * * 816 * * * * * * * * * * * * 4070 * 1424 42 0 * * * * * * 3168 0 0 D 43 * * 2160 780 * * * 3836 * * * * 3698 * * 4414 * * * * 43 0 * * * * * * 3003 0 0 A 44 94 * * * * * 3981 * * * * * * * * * * * * * 44 0 * * * * * * 3003 0 0 R 45 * * * * * * * * * * * * * 3848 104 * * * * * 45 0 * * 0 * * * 2789 0 0 //