HHsearch 1.5 NAME c9ihrX_ FAM FILE c9ihrX_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9ihrX_.a3m DATE Sat Oct 18 10:49:22 2025 LENG 115 match states, 115 columns in multiple alignment FILT 29 out of 31 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.4056 -1.2034 SEQ >ss_pred CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC CCCCHHHHHHHCCCC >ss_conf 9578998742443899999999999999999865379998388899899999999999972268709999999999999999999996342368878427 782446798732689 >Consensus xxxxxxaxtxxxSxnxxEArxrvlxlYRxxxRxiPxixxxYxLxxxxxxxRxkIrxxFxxnxxvxDxrviDxLvxkgxxElxexxxxwKQrxHvmxyfxx xxxsxFlxkFlxGxx >c9ihrX_ TNPTAFAQTTRYVKDSTEMRTLVLNLYRRYLRHSRGFVNNYNLDIPASQVRTKIRQEFERQRFVKDLPLKNVLYMKAQMEFQELVNFWKQQCHVMQYFES IKGDSFVQKFLKGAQ >UniRef50_Q6UKY9(24-127:138) NADH:ubiquinone oxidoreductase B14 subunit n=1 Tax=Chlamydomonas reinhardtii RepID=Q6UKY9_CHLRE E=4e-05 s/c=0.47 id=20% cov=71% -------------------------------RCLPFIQRLHKMEemVSLKELRAIVKEKFKEYKDVKDGRVVDLLIFKGREEIETYLLMHKQRHHVVTEV VEPyyakqravkkvtTNSPFLDSFLS--- >UniRef50_B8PKM4(3-119:133) Predicted protein n=4 Tax=Agaricomycetes RepID=B8PKM4_POSPM E=1e-33 s/c=1.22 id=34% cov=100% TIPARLARTAQISANPAQARQRVIQLYRDWYRGAPEMVSLYAIPVSVQYFRQCIRRKFEENRYVTDQRVVDVLLLKGRQEYQETINLWKQTDHVMGILle tQSRPPRPFLQKFYEGR- >UniRef50_D0A0E2(182-270:713) Putative uncharacterized protein n=7 Tax=Trypanosomatidae RepID=D0A0E2_TRYBG E=8e-20 s/c=1.10 id=27% cov=78% ---------ANTVVNW-EIKAAMMSLYRSCLKGLPMVKHYYWLLTPLPEMKSKIRERFLQNQHTKDPDAIRHLLHNGWMEYQEVILFRRTRASVAKFFE- --------------- >UniRef50_A0BPW3(45-169:173) Chromosome undetermined scaffold_12, whole genome shotgun sequence n=3 Tax=Paramecium tetraurelia RepID=A0BPW3_PARTE E=4e-22 s/c=0.84 id=16% cov=94% --------TGRPSKNIIQAHFKVLRFYRKVCRLIPFLLRIHDMEVTcnSQQAMLNVANVIRKRAYLRDPDAVDRWVYRGYELLYQAEWHMLNRDHLFQYF ANQNRSDagysylenqklkgkseFLKDFYIGNK >UniRef50_O18236(24-131:131) Protein Y57G11C.12b, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O18236_CAEEL E=9e-22 s/c=0.96 id=24% cov=90% ------------SNNSAEARMSVLAAYKEFQRLTPKFWWDFGLhDMPLGVFRAVIKKQFTKNGHLTDVRVVDRLVGETHQHMKSIRYAFYNPDHVRNYLf aenVEAKPKDFLSKFLNGKE >UniRef50_D2VT73(43-131:180) NADH-ubiquinone oxidoreductase n=1 Tax=Naegleria gruberi RepID=D2VT73_NAEGR E=4e-21 s/c=1.15 id=26% cov=77% -----------RSKSLEEANANVLFLYRRMLKILPWMKETYHVPTNLDVMRKTIHKEFKSFQGLSDTELIDALVIRGYIEYNEATMHHKQRGHIIKFF-- --------------- >UniRef50_C1EGJ0(25-141:144) Predicted protein n=2 Tax=Micromonas RepID=C1EGJ0_9CHLO E=7e-20 s/c=0.84 id=20% cov=90% -----------FSADLTEAKARSRQFFRDVCRQVPWAMREFFLEevTTTAKFRSQLANEWRRHRT-DDHRVIDVMLFKANQELVTVLAHHFQRHHLITKY VAPesnainrrsksgkPQSKFLSAFLDGK- >UniRef50_Q54F42(17-106:124) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 n=1 Tax=Dictyostelium discoideum RepID=NDUA6_DICDI E=4e-18 s/c=1.03 id=22% cov=79% ------------SLTQQQARRRCFKLYRNCIRSIPHLIQHYNLSYNMSEMRNRFRSNFVEFEEVTEKNQLDRLAFIGETELFDAMSLLKTRSHVVNYFDT QP------------- >UniRef50_B7S480(16-106:123) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7S480_PHATR E=4e-17 s/c=0.98 id=25% cov=77% ---------------------RPARLYKCIMREVPRVLMIYDLmNISRADAKKAIRDHFYHNKDVKDQRVQDMLVEKGYIDLEDTLLQHKQKTHLMVLLE GPIGTDFNDK------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * * 0 * * * 1 0 * * * * * * 1848 0 0 N 2 * * * * * * * 1022 * * * 978 * * * * * * * * 2 0 * * * * * * 2101 0 0 P 3 * * * * * * * * * * * * 0 * * * * * * * 3 0 * * * * * * 2214 0 0 T 4 1669 * * * * * * * * * * * * * * * 545 * * * 4 0 * * * * * * 2486 0 0 A 5 1846 * * 2896 * * * * 2916 * * * * * 1669 * * * * 2830 5 0 * * * * * * 2486 0 0 F 6 * * * * 1278 * * * * 1136 * * * * * * * * * 2916 6 0 * * * * * * 2486 0 0 A 7 0 * * * * * * * * * * * * * * * * * * * 7 0 * * * * * * 2486 0 0 Q 8 * * * 1859 * * * 2916 2688 * * * * 1850 2650 * * * * * 8 0 * * * * * * 2486 0 0 T 9 3013 * * * * * * * * * * * * * 3162 * 388 * * * 9 0 * * * * * * 3029 0 0 T 10 1989 * * * * 2337 * * * * * * * * * * 1150 3328 * * 10 0 * * * * * * 3322 0 0 R 11 * * * * * * * * 3328 * * 2772 * 3244 872 3291 * * * * 11 0 * * * * * * 3322 0 0 Y 12 * * * * 1956 * * 2890 * * * * 3091 4121 2753 2949 3467 * * 3957 12 0 * * * * * * 3920 0 0 V 13 * * * * * * * * * * * * * * * 218 * 2837 * * 13 0 * * * * * * 4774 0 0 K 14 1918 * * * * 4658 * * 2809 4137 * 4151 * 4128 2462 3744 * 2981 * * 14 0 * * * * * * 4789 0 0 D 15 * * 2202 * * * * * * * * 1052 * * * 2281 3403 * * * 15 0 * * * * * * 4789 0 0 S 16 3824 * * * * * 3612 4246 4658 2602 3576 * 3897 4137 4885 3382 * * 2608 3491 16 85 * 4120 * * * * 4789 0 0 T 17 2174 * 2950 3480 * 4760 * 4199 * * * 4155 4590 2836 * 4863 2892 4031 * * 17 0 * * * * 0 * 4733 0 1000 E 18 * * 3329 585 * * * * * * * * * 2096 * * * * * * 18 0 * * * * * * 4789 0 0 M 19 276 * * * * * * 4120 * 3694 4657 * * * * * * * * * 19 0 * * * * * * 4789 0 0 R 20 * * * * * * 4246 * 1963 4439 * 4310 * 3600 1137 4128 * * * * 20 0 * * * * * * 4789 0 0 T 21 2717 * * * 4246 * * * 2401 * 3140 * * 4946 1368 * 4657 4923 * * 21 0 * * * * * * 4789 0 0 L 22 3415 * * * * * * * 3228 4685 * 4364 * * 676 3537 * * * * 22 0 * * * * * * 4858 0 0 V 23 3994 4178 * * * 3548 * * * * 4178 * 4693 * * 3619 3420 922 * * 23 0 * * * * * * 4858 0 0 L 24 4693 * * * 2985 * * 3187 * 1027 4178 * * * 2479 * * * * * 24 0 * * * * * * 4858 0 0 N 25 2581 * 4606 4294 4364 3789 4806 * 3480 * * 2997 * 3769 2782 3084 4940 * * * 25 0 * * * * * * 4858 0 0 L 26 3465 * * * 2148 * * * * 621 * * * * * 4899 * * * * 26 0 * * * * * * 4946 0 0 Y 27 * * * * 3631 * * * * * * * * * * * * * * 121 27 0 * * * * * * 4946 0 0 R 28 * * * * * * * * 2727 * * * * * 236 * * * * * 28 0 * * * * * * 4946 0 0 R 29 1898 4848 3121 3510 * * * * 3256 * * 4212 * 3847 2752 4272 4785 * * 5077 29 0 * * * * * * 4946 0 0 Y 30 4670 3242 * * 2771 * * 3957 * * 4407 * * * * * * 2511 1516 3795 30 0 * * * * * * 4946 0 0 L 31 * 1893 * * 4970 * * 4212 * 2082 3839 * * 4204 * 5021 5077 * * 2158 31 0 * * * * * * 4946 0 0 R 32 * * * * * * * * 2971 * * * * * 197 * * * * * 32 0 * * * * * * 5000 0 0 H 33 3996 4925 * 2586 * 3153 4937 4462 * 2720 * * * 2274 * 2672 * * * 4965 33 46 5008 * 2000 415 * * 5000 1000 0 S 34 3029 * * * * * * 1791 * 2497 * * 5008 * * 3375 3608 2308 * * 34 0 * * * * * * 5000 0 0 R 35 * * * * * * * * 3986 * * * 145 * 4937 * * * * * 35 0 * * * * * * 5000 0 0 G 36 * * 4776 2738 2279 4937 4248 * 4201 5013 4295 4399 * * 3869 * 3752 * 2577 5135 36 0 * * * * * * 5000 0 0 F 37 4632 * * * 2707 * * 1608 * 3346 3316 * * * * * 4399 2313 * 5008 37 0 * * * * * * 5000 0 0 V 38 3940 4965 * * * * * 3166 3376 2285 3024 * 4385 3437 * * * 2536 4201 * 38 0 * * * * * * 5000 0 0 N 39 * * 2283 3852 * * 3405 * 4401 * 4021 4009 * 3533 2329 4194 3948 * 4187 * 39 0 * * * * * * 4990 0 0 N 40 5362 * 3607 3534 * * 4299 2177 * 2402 4063 3160 * 5474 * 4993 3778 * * 4392 40 0 * * * * * * 4990 0 0 Y 41 * * * * 2809 * 2942 * * * * * * * * 4993 * * * 523 41 118 3667 * 1155 860 * * 4990 1189 0 N 42 3928 * 2842 3952 4682 3466 4543 * 4904 * * 2158 * 3702 5246 2741 * * 4392 * 42 0 * * * * * * 4990 0 0 L 43 * * * * * * * 2854 * 774 3046 * * * * * 5363 2925 * * 43 219 2828 * 455 1888 * * 4990 2339 0 D 44 * * 2085 3088 * * 4813 * 4280 4392 * 2906 2416 3827 4692 4299 4993 * * * 44 270 2551 * 1000 1000 * * 4990 2503 0 I 45 4692 * * 4558 3543 * * 2794 5246 4302 2786 * * * * * 2949 1963 * 3629 45 0 * * * * * * 4990 0 0 P 46 4791 * * 4938 * 5362 * * * * * 3416 1812 * * 2602 1638 4558 * * 46 67 4467 * 1000 1000 * * 4990 1000 0 A 47 3604 * * 3943 * * * 3421 * 2483 4299 * 3261 * 4860 4467 3241 2059 * * 47 63 4558 * 3322 152 * * 4990 1000 0 S 48 2875 * 3550 3582 * 4187 * * 4161 4993 * * 2952 2756 * 2080 4692 * * * 48 0 * * * * * * 4990 0 0 Q 49 4958 * 4860 2390 * * 3835 5363 4682 4813 5474 5044 * 2067 * * 3958 2389 * 5211 49 0 * * * * * * 4990 0 0 V 50 2357 3683 * * 3048 5474 * 3409 * 2833 2444 * * * * * * 2597 * * 50 0 * * * * * * 4990 0 0 R 51 * * * * * * 4401 * 3154 * 3370 * * 5058 487 * * * * * 51 46 * 4993 * * * * 4990 0 0 T 52 2021 * 4277 5319 * * * 4255 3667 3656 4786 4281 * 5182 4647 3156 2621 * * 4768 52 0 * * * * * 0 4966 0 1000 K 53 3253 5182 * * * * * 4105 1335 * * 3344 * 4645 2886 * 4517 3385 * * 53 0 * * * * 0 * 4966 0 1000 I 54 * * * * 3289 * * 917 * 2252 * * * * * * * 2661 * * 54 0 * * * * * * 4990 0 0 R 55 3215 * * 4558 * 4280 4543 * 2447 * * * * 4938 990 4791 * * * * 55 0 * * * * * * 4990 0 0 Q 56 3862 * 3773 1588 * * * * 3354 * * 2882 * 2390 5211 3750 * * * * 56 0 * * * * * * 4990 0 0 E 57 * * 4813 1448 * * 4860 * 3527 3136 4417 3629 * 3457 4392 * * 4467 * 4280 57 0 * * * * * * 4990 0 0 F 58 * * * 4558 421 * * 2912 * * 4692 * * * * * * * 4682 * 58 0 * * * * * * 4990 0 0 E 59 * * 5362 2199 * * * * 3712 3757 4251 * * * 1534 * 3360 3681 * 4860 59 0 * * * * * * 4990 0 0 R 60 4692 * * 2620 * * 4860 5246 1895 * * 4791 * 3639 1691 4543 * * * * 60 0 * * * * * * 4990 0 0 Q 61 * * * * 3416 * 2294 * * * * 1093 * 4034 3370 * 4558 * * 4904 61 0 * * * * * * 4990 0 0 R 62 2513 * * 4299 * 4187 * * 2532 * * 4280 * 3466 1512 4224 * * * * 62 0 * * * * * * 4990 0 0 F 63 * * 2219 3482 3023 4543 1783 * * * * 4224 4558 * * * 4682 * * 3260 63 112 4813 4682 0 * * * 4990 1000 0 V 64 * * * 4444 * * * 2646 4545 2761 * * * * * * 4367 992 * 4246 64 0 * * * * 0 * 4941 0 1000 K 65 * * 3111 * * * * 4692 1957 * * 3472 * 5246 2980 4543 1728 * * * 65 0 * * * * * * 4990 0 0 D 66 * * 334 4299 * * * * 5176 * * 4215 * 4958 4558 * * * * * 66 0 * * * * * * 4990 0 0 L 67 4558 * * * * 3794 4682 5202 4299 1892 * * 1944 4025 * * 3912 3168 * * 67 0 * * * * * * 4990 0 0 P 68 3819 * 3021 4543 * 4280 * * 4067 * * 3423 4098 * 1216 3839 * * * * 68 57 4692 * 3170 170 * * 4990 1000 0 L 69 2340 * * * * * * 3145 * 2610 * * * 3696 * * * 1157 * * 69 0 * * * * * * 4990 0 0 K 70 * * * * * * * 1227 5024 2922 4813 * * 3862 * 5044 * 1860 * * 70 0 * * * * * * 4990 0 0 N 71 * * 284 * * * * * * * * 2933 * * 4392 * * * * * 71 0 * * * * * * 4990 0 0 V 72 4543 * * * * * 3335 3787 * 2550 2570 * * * 2399 * * 1962 * * 72 0 * * * * * * 4990 0 0 L 73 3623 * * * * * * * * 420 3746 * * * 4280 * * * 4467 * 73 0 * * * * * * 4990 0 0 Y 74 4299 * * * * * * 2275 * 1540 * * * * * * * 1584 * 3942 74 0 * * * * * * 4990 0 0 M 75 4865 * * 4860 2218 4187 2985 2529 * 3998 3326 * * 4280 * * 4052 * 4558 4467 75 0 * * * * * * 4990 0 0 K 76 * * * 4187 * * * 4299 957 4280 * 4392 * 4958 2012 * * * * * 76 0 * * * * * * 4990 0 0 A 77 2788 * * * * 613 * * * * * 4813 * * * 4958 4187 * 3667 * 77 0 * * * * * * 4990 0 0 Q 78 * * * 3629 * * 2437 * 3773 * 4067 3804 * 2583 2821 * * * 4392 2522 78 0 * * * * * * 4990 0 0 M 79 4063 * * 1884 * * * 3324 * * 1819 3667 * 2676 * * 4299 * * * 79 0 * * * * * * 4990 0 0 E 80 * * 3441 403 * * 4187 * * 3370 * * * * * * * * * * 80 0 * * * * * * 4990 0 0 F 81 * * * * 3564 * * 4904 * 786 4187 * * * * * * * * 2016 81 0 * * * * * * 4990 0 0 Q 82 * * * 2744 4299 * * 3349 3607 5440 * 4543 * 1645 5410 * 4791 3687 * 3370 82 0 * * * * * * 4990 0 0 E 83 3623 * 3043 733 * * * * * * * 5410 * 4467 * 4187 3789 * * * 83 0 * * * * * * 4990 0 0 L 84 2393 4865 * * * * * 3457 * 2814 * * * * * 5202 1773 2405 * 4904 84 0 * * * * * * 4990 0 0 V 85 3667 * * 2491 * * * 2426 * 2133 3133 * * * 4187 * 4543 3089 * * 85 0 * * * * * * 4990 0 0 N 86 3058 * 4791 4302 * * 3667 * 4356 2781 2977 2199 * 5362 * 4299 * * 4467 4187 86 0 * * * * * * 4990 0 0 F 87 4187 * * * 2551 * 1647 3593 * 3310 4904 5058 * 3898 * * * 3201 * 4958 87 0 * * * * * * 4990 0 0 W 88 4791 * * * 3232 * 2115 * * 4299 4467 * * * 4392 5410 * * 1122 * 88 0 * * * * * * 4990 0 0 K 89 * * * * 3687 * * * 615 4467 * * * * 3732 4280 * * * 3360 89 0 * * * * * * 4990 0 0 Q 90 * * * * * * * * * * * 3320 * 468 * 3667 3345 * * * 90 0 * * * * * * 4990 0 0 Q 91 * * 3201 * * * 4280 * 3407 4958 * * 4187 3390 1163 * 3626 4813 * * 91 0 * * * * * * 4990 0 0 C 92 3609 3457 2976 * * 3835 2230 * * * * * 4813 * * 3591 1913 4938 * * 92 0 * * * * * * 4990 0 0 H 93 * * * * * * 207 4280 * * * * * 4865 * 4392 * * * * 93 0 * * * * * * 4990 0 0 V 94 5362 * * * 4865 * * 2946 * 2028 3914 * * * * * * 1000 * * 94 0 * * * * * * 4990 0 0 M 95 4392 * * * 4467 * * 2167 * 3952 1258 * * * 3558 * * 3098 * * 95 0 * * * * * * 4990 0 0 Q 96 * * 3201 * * 3529 4813 * 2671 * * 3242 * 2972 2936 5176 2426 4860 * * 96 0 * * * * * * 4990 0 0 Y 97 * * * 4904 2622 * * 5211 4682 3898 * * * 3346 4558 * * * 4813 1015 97 0 * * * * * * 4990 0 0 F 98 * * * * 643 * * * * 2319 * * * * * * * 4904 5202 3342 98 396 2058 * 2429 296 * * 4990 2850 0 E 99 4406 * 3026 1864 * * * * 2915 * * 4910 4807 5027 3644 4193 * 2407 * * 99 103 3854 * 1867 462 * * 4803 1520 0 S 100 3357 * 2575 1751 * 4632 3699 * * * * 3321 3365 * * 3856 4211 * * * 100 118 3673 * 2338 318 * * 4593 1680 0 I 101 4153 * 3852 3753 * * * 4747 * * * * 1452 2545 3749 * * 3412 * 4114 101 583 1589 * 3153 172 * * 4593 3290 0 K 102 * * 4803 4860 * 3861 * 4632 2735 * * 3233 2266 3046 2637 4836 4668 * * * 102 138 3452 * 2907 206 * * 4593 1662 0 G 103 * * * * * 3627 * * 2831 * 4961 4605 991 4383 3209 * 4431 * * * 103 0 * * * * * * 4454 0 0 D 104 3756 * 4690 * * * * * 2005 * * 4747 * * 4912 1442 2326 * * * 104 0 * * * * * * 4454 0 0 S 105 4158 * 1168 4961 * * * * 2681 * * 4630 2704 * * 3726 4592 * * * 105 77 4262 * 4000 93 * * 4454 1000 0 F 106 * * * * 138 * * * * 3458 * * * * * * * * * * 106 0 * * * * * * 4454 0 0 V 107 * * * * * * * 4762 * 682 4859 4567 4431 * * * * 2204 * * 107 0 * * * * * * 4454 0 0 Q 108 * * 1383 4592 * 4723 * * 2256 * * * * 2903 * 2365 * * * * 108 66 4484 * 2807 222 * * 4454 1000 0 K 109 4383 * 3209 * * 3343 * * 870 * * 2669 * * * 4605 * * * * 109 0 * * * * * * 4454 0 0 F 110 * * * * 0 * * * * * * * * * * * * * * * 110 0 * * * * * * 4429 0 0 L 111 * * * * * * * 4824 * 896 4400 * * * * * * * * 1396 111 0 * * * * * * 4429 0 0 K 112 4139 * 3403 4665 * * 4966 4117 2633 * * 3889 * 2944 4522 2058 4428 5014 * * 112 0 * * * * * * 4294 0 0 G 113 * * * * * 162 * * * * * 4153 * 4330 * * * * * * 113 0 * * * * * * 4155 0 0 A 114 3517 * * * * * * * 1254 * * 2378 * * 1732 * * * * * 114 0 * * * * * * 3787 0 0 Q 115 * * * 2700 * * 2896 * 1744 * * * * 1275 * * * * * * 115 0 * * 0 * * * 3104 0 0 //