HHsearch 1.5 NAME c9ha1N_ FAM FILE c9ha1N_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9ha1N_.a3m DATE Sat Jan 25 10:45:21 2025 LENG 109 match states, 109 columns in multiple alignment FILT 106 out of 181 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.8 EVD 0.4592 0.6792 SEQ >ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEEECHHHHHHH HHCCCEEEC >ss_conf 9666788998703540000326789887457888877677268615321467400799998759745577622797478768447899854189999999 980984529 >Consensus kLxxLxpxxgaxkxrkRvGRGxgSGxGkTaGRGxKGqkxrxxxxxxxxxxegxxvxxxxLxxxglixxxxxxvKilgxGelxxxixixxxxxSxxAxexI exaGGxvee >c9ha1N_ RLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKAAITAEIRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAI EAAGGKIEE >UniRef50_Q6ME46(4-147:150) 50S ribosomal protein L15 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RL15_PARUW E=1e-12 s/c=0.52 id=32% cov=99% -LNTLKDSTRKRKPRKRVGRGIGSKHGKTCGRGEKGagarsgykrrlgkeggqmplfmklplrgfsnaQFRRQFDVINLDQIEavfkdGETVDELSLRER GFISGRTHGIKLLGNGDLTKKVKIHVHAISESAREKLTQAKVSFE- >UniRef50_Q3KLI6(3-144:144) 50S ribosomal protein L15 n=13 Tax=Chlamydiaceae RepID=RL15_CHLTA E=6e-07 s/c=0.39 id=32% cov=95% KLECLQDPSPRKRRTKLLGRGPSSGHGKTSSRGHKGDCSRSGykrrfgyegggvplyrrvptRGFSHKRFDkcveeittqrlneifdnGAEVSLEALKER KVIHRETSRVKVILKGALDKKLVWKDAAIvlSEGVKSLIEAV------ >UniRef50_B8IYL0(2-146:153) 50S ribosomal protein L15 n=5 Tax=Desulfovibrionales RepID=RL15_DESDA E=2e-16 s/c=0.60 id=32% cov=101% QLHNLYPFPEERKTRRRVGRGSGSGLGCTAGKGHKGQNARAGGGvapgfeggqmplqrrlpkhgfkNAPFKVTYDVINLDRLLEafegkdtitlddiyAR GLARMGAPVKILSRGEVKSALKVEAHKFSQTAAEKIRGAGGEVSE >UniRef50_Q9Y7M5(2-149:220) 60S ribosomal protein L10, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=RM10_SCHPO E=5e-12 s/c=0.49 id=31% cov=96% -LNDLNNSAN-YQSKKRVGRGPASGLGKTSGRGHKGSGQRRGRRIKP-GFEGGQtpitklfpkvghstghlkkplrlglgrvqewidrgrldasktITMK DLLDSRCCRGIKHGVELTADepGLLKTAISIEVSKATVQAIQQIKNAGGSI-- >UniRef50_A2QQY5(43-162:317) Remark: YNL284C is the systematic name for MRPL10 of S. cerevisiae n=18 Tax=Eurotiomycetidae RepID=A2QQY5_ASPNC E=2e-16 s/c=0.72 id=26% cov=100% -LASLSDTQGAYNKRIRRGRGPASGKGKTSGRGHKGQKQHgkvpaaFNGGQTPDIIVHGERGFNNVHSIDLAPVNLDRIQSWIDQgriDPTRPITVRELA QSRcihQTKEGVKLLGRGVEK >UniRef50_A5USH0(2-145:174) 50S ribosomal protein L15 n=7 Tax=Bacteria RepID=RL15_ROSS1 E=6e-15 s/c=0.57 id=32% cov=100% KLHDLKPAPGAHRERKRIGRgigsgkgktggkgmmgqkarsGPKPSPSFEGGqmritrkmpklRGFKNRwrvEYQVINIGQLNDVpDGTELTIEEMVAQG WIHP-AKPVKILGDGELERKLTIHAHKFSASARARIEAAGGAAIE >UniRef50_A8J6Z1(117-272:347) Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J6Z1_CHLRE E=3e-12 s/c=0.47 id=26% cov=98% -LGNLRDNPGATRQRIRVGRGDGSRRGNYGGRGMKGQKSRGRGlhmlydggqlgllkfpvtrqrpsyevlyyhlglsrvaeFVQLGLLDAGrtitmkara dmESDAADLYDSGCVTSNIKyGVLLYGKARLAVPLDLQVTACDADTRAAVESAGGRV-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 898 * * * * 2749 1668 * * * * * 1 0 * * * * * * 4055 0 0 L 2 6395 * * * * * * 4805 * 87 * * * * * * * 6535 * * 2 0 * * * * * * 4723 0 0 N 3 4040 * 5516 4681 * 3986 1993 * 6142 * * 1333 * * * 2842 6219 * * * 3 0 * * * * * * 4748 0 0 T 4 * 5406 2623 2984 * 5064 6582 * 5229 6535 * 1701 * 4299 6341 4213 2538 * * 6260 4 0 * * * * * * 4748 0 0 L 5 6171 * * * * * * 2353 * 359 * * * * * * * 6575 * * 5 0 * * * * * * 4753 0 0 S 6 4695 6368 * 5002 5363 6442 5490 6171 1534 * * 4984 6523 3586 2447 3312 * 6491 5429 4145 6 0 * * * * * * 4753 0 0 P 7 5554 * 2068 * * * * * * * * 4352 772 * 4820 4556 * 6546 * 5870 7 49 * 4898 * * * * 4753 0 0 A 8 1787 * 6465 * 4334 3530 5028 6474 3786 6544 * 2266 4125 6421 * 4216 4069 4400 * * 8 0 * * * * 0 * 4733 0 1933 E 9 3254 * 6884 2936 * * 6411 4332 2994 3838 5317 5269 1523 4876 * 4774 5619 6747 * * 9 16 6495 * 0 * * * 4753 1000 0 G 10 6750 * 6040 4501 6727 503 6354 * 6077 * * 5021 4146 * 4575 5437 4762 * * * 10 48 * 4943 * * * * 4753 0 0 S 11 1276 6162 * 4875 * 6523 5304 * 4237 * * 6516 * 6677 5423 1348 * * * 6262 11 0 * * * * 0 * 4831 0 1858 K 12 6737 * * * 6188 * 3771 5783 2475 * 5984 4234 * 5383 1860 4572 2962 3733 6586 3622 12 58 4666 * 0 * * * 4856 1915 0 K 13 6571 * * * 6428 * 3091 * 942 * * 4126 5854 3935 2729 5628 5745 * * 6606 13 0 * * * * * * 4840 0 0 A 14 3419 * 5156 4170 * 7390 6644 6668 1837 5671 * 3334 3712 4383 3399 3158 4758 5038 * * 14 33 5463 * 0 * * * 4840 1000 0 G 15 4929 * * 5231 7028 4346 * * 1762 * * 6611 6629 4529 1312 4571 4089 6632 * 6428 15 0 * * * * * * 4840 0 0 K 16 5628 * * * * * 5202 3375 1007 6650 6918 4666 * * 2687 * 3609 3976 * * 16 0 * * * * * * 4840 0 0 R 17 * * * * * * * 5409 6397 4520 * * * * 181 * 6182 5307 * * 17 0 * * * * * * 4840 0 0 L 18 * * * * * 5463 * 2935 3694 2580 * * * * 3531 * * 1013 6668 6611 18 0 * * * * * * 4840 0 0 G 19 4593 * * * * 96 * * * * * * * * 5463 * * * * * 19 0 * * * * * * 4840 0 0 R 20 * * * * * 5477 * * 6206 6446 * 6125 * * 92 * * * * * 20 49 5410 6680 4392 70 * * 4843 1000 0 G 21 * * * 5455 * 33 * * * * * * * * * * * * * * 21 0 * * * * * 0 4843 0 1000 I 22 6749 * 5861 3966 5485 5455 4170 1828 * 5498 5421 6617 2031 3229 5732 4465 5387 5511 * 6611 22 0 * * * * * 0 4843 0 1000 G 23 2987 * * * * 599 * * 5406 * * * * * * 2396 * * * * 23 13 * 6785 * * 0 * 4843 0 1000 S 24 3425 6420 * * * 4927 * * * * * * 5307 * * 307 5120 * * * 24 49 5769 6031 3907 100 0 * 4852 1000 1000 G 25 * * 6581 * * 221 * * 4661 * * * * * 3871 5403 * * * * 25 14 6665 * 0 * 0 * 4849 1000 1351 L 26 * * * * 6441 4932 3679 6149 1913 2182 * 4683 5409 4424 3003 5823 4416 5653 4312 6763 26 0 * * * * * * 4843 0 0 G 27 * * 6802 * * 48 * * * * * * * * * 5409 * * * * 27 0 * * * * * * 4843 0 0 K 28 5562 4628 * * 5409 3758 4796 * 544 * * 4362 * * 6446 * 4625 5777 * * 28 0 * * * * * * 4843 0 0 T 29 5159 * * 5409 * * * * * * * * * 5026 * 4148 244 * * 5876 29 0 * * * * * * 4843 0 0 G 30 1433 2461 * * * 3294 * 5777 * * * * * * * 1609 * * * * 30 0 * * * * * * 4843 0 0 G 31 6357 * * * * 232 * * * * * * * * * 5585 3111 * * * 31 34 5410 * 3459 138 * * 4843 1000 0 R 32 * 6641 * * 5688 5777 6660 * 2589 * * * * * 410 * * 6214 * 6632 32 0 * * * * * * 4843 0 0 G 33 * * * * 5777 27 * * * * * * * * * * * * * * 33 0 * * * * * * 4843 0 0 H 34 * * 6674 4755 4901 6669 1348 6285 * * 3431 3985 * 2521 5635 4930 3405 5776 * 6861 34 21 6124 * 5087 43 * * 4843 1000 0 K 35 * * 5930 * * 4757 * * 254 * * 5069 * * 4283 5211 * * * * 35 41 5165 * 3954 96 * * 4843 1796 0 A 36 5486 * * * * 108 * * 6099 * * 5364 * * * 6474 * * * * 36 42 5122 * 4846 51 * * 4860 1859 0 A 37 3332 * 5579 * * 5537 5331 * 5588 6810 * * * 541 4917 3956 5742 * * * 37 130 4119 5119 3208 165 * * 4860 2213 0 I 38 * 5544 6032 5355 4969 3683 5080 7014 1010 * 5172 3333 * 4864 5211 4840 4955 6710 * 5043 38 141 3534 7223 4849 51 0 * 4822 3064 1537 T 39 1555 * * * 6054 5718 * * 5139 * * * 4305 3570 6576 1672 4500 * * 3414 39 171 3160 * 4674 58 0 * 4867 3148 1000 A 40 3127 * * * * 5418 4891 * 6576 5174 * * 3594 3630 785 4681 * 7057 * * 40 95 3967 * 4259 77 * * 4870 2476 0 E 41 4153 * * 3051 4756 5090 5174 5479 2540 6576 * 5757 * 4938 3463 1697 5181 4431 * * 41 232 3135 4853 4890 49 * * 4870 3115 0 I 42 * * * * 5464 1450 5730 2870 5873 4173 6771 4727 * * 3186 4090 * 2576 * * 42 194 3285 5427 4523 64 0 * 4872 3097 2176 R 43 4803 * 6655 * * 1248 * * 4935 6445 * 1954 * * 2801 4956 5146 6300 * 6121 43 119 3917 6297 4957 47 * 0 4854 2561 1473 L 44 6608 * * * 2066 2408 * 4909 5096 1712 * * * * 6534 4176 5742 3859 * 4607 44 44 5728 6470 4796 53 0 * 4854 1533 1858 S 45 5268 * 6874 4644 5563 4098 6407 4550 2106 * 6871 3597 4725 4405 3563 2998 4008 3530 * 5357 45 71 5028 5864 4463 67 0 * 4871 1935 1000 D 46 4109 * 2583 * * 6954 6632 5524 2770 * * 2424 6570 3561 3026 3335 3838 6042 * * 46 8 7578 * 5087 43 0 * 4876 1000 1505 L 47 * 7113 * 6541 * * 5308 2733 4049 1378 * 6318 2173 * 3468 6937 * 5135 * * 47 131 4818 4283 4400 70 * * 4870 1901 0 A 48 3432 * 2866 3455 2934 5230 * 5367 3722 4141 * 3207 3485 4141 5739 4246 * 4679 * * 48 10 7217 * 5170 41 0 * 4844 1000 2332 K 49 4619 * 4357 6056 4750 2798 6978 4997 2175 3950 * 5401 6638 4764 2320 4456 * 6769 3975 * 49 68 4440 * 4020 92 * * 4870 2124 0 V 50 6787 * * * 1710 * 6771 2857 3214 2626 6584 4807 * 5833 * 5525 6638 2760 * 5307 50 261 2595 * 2973 197 * * 4870 3309 0 E 51 4150 6604 2552 1063 * 5772 * * 4250 6318 * 6156 4112 5837 * 4430 5694 4449 * * 51 79 4224 * 3237 162 * * 4870 2601 0 G 52 5004 * 5803 5361 7406 922 4030 * 5798 5220 6419 6662 6491 6885 5467 6319 5361 5089 * 2672 52 44 5053 * 4205 80 * * 4869 2105 0 G 53 3662 * 4120 2562 * 1278 * * 5012 * * 3843 * 4842 6349 3884 3918 * * * 53 121 3632 * 4116 86 * * 4869 2939 0 V 54 6349 * * 1856 * * * 5730 6285 4917 * 5435 4627 2249 5350 5753 2416 2813 * * 54 169 3181 * 5013 45 * * 4869 3113 0 V 55 6782 * * * 4324 * 6064 1918 * 3069 3988 * * 6586 5510 5245 4213 1448 * * 55 0 * * * * * * 4869 0 0 D 56 * * 1914 6469 * 4761 * * * * * 2261 3096 5468 * 3502 2000 * * * 56 60 4627 * 2407 301 * * 4869 2248 0 L 57 4472 * * 5348 3919 * * 2522 6162 1500 3972 5558 3456 * 4481 * 5472 3841 * 6723 57 95 3969 * 4120 85 * * 4869 2589 0 N 58 3156 * 3105 1829 5558 * 3945 5466 3085 5407 5586 4150 6279 4314 4721 4686 6607 6319 * * 58 117 4094 5716 4086 88 * * 4869 2560 0 T 59 3422 * 4114 4754 6030 * 6636 5126 4835 5016 5989 4388 * * 3469 2786 1994 2816 * * 59 60 4610 * 4552 63 0 * 4828 2045 1000 L 60 * * * * 5801 * * 4356 6677 431 2761 * * * * * 6332 5510 * * 60 36 5325 * 3909 99 * * 4869 1520 0 K 61 3912 * * 5060 4529 * 3678 4401 2099 3537 * 6754 4674 5385 3111 * * 3117 6832 3277 61 0 * * * * * * 4869 0 0 A 62 3064 * 2889 1870 * * 7070 5784 2499 4111 5716 5478 * 3986 6770 3694 6545 6677 * * 62 52 4831 * 3443 139 * * 4869 2012 0 A 63 2246 5521 * * 5278 6279 5604 4648 3487 2734 6782 3592 6373 4794 3085 3250 * 4927 * 4926 63 18 6349 * 4000 93 * * 4869 1000 0 N 64 6279 * 4393 * * 722 * * 2885 * * 3314 * 6285 3744 6677 * * * * 64 0 * * * * * * 4869 0 0 I 65 4874 4151 * * 4206 5173 * 2332 6427 1272 6835 * * 6586 6421 6964 * 2835 5358 * 65 0 * * * * * * 4869 0 0 I 66 3753 6062 * * 5550 * * 1337 6560 3439 * * * * 4711 5167 6664 1667 * * 66 95 4500 5671 0 * * * 4869 2130 0 G 67 4173 * 5779 6145 * 2804 3811 6945 2826 * * 3398 3247 6045 2860 2839 4351 7206 * * 67 83 6319 4525 4000 93 0 * 4869 1000 1496 I 68 3878 * 4589 6590 * 3086 * 5565 2251 5429 * 4462 3612 5974 2664 3114 4550 4359 * * 68 97 4641 5321 2042 401 0 * 4838 2359 1972 Q 69 5465 5572 6736 4092 5583 3993 5127 3902 2422 6438 5444 3007 3835 4582 3467 4854 3898 4066 * * 69 59 5766 5519 4661 58 0 * 4823 1426 1000 I 70 3107 6131 4376 6496 4684 4505 * 3221 2273 4159 5722 3870 7804 5042 5647 4863 4181 3686 * 4378 70 68 5301 5606 3592 125 0 * 4896 1873 1732 E 71 6175 * 2050 4422 6727 5551 3361 7466 2351 3917 * 3806 4766 4489 4399 4347 5507 * * 5026 71 125 3786 6602 2842 217 0 * 4863 2769 1496 F 72 5071 * * 5810 4456 1784 * 5440 2998 3549 * * 2554 * 2941 6597 5538 5255 * 5363 72 87 4421 6388 2947 200 0 * 4877 2267 1000 A 73 4577 6645 * 5975 6737 * * 2092 6203 3549 * * * 6823 * 5722 * 860 * 6565 73 13 6823 * 5044 44 0 * 4874 1000 1000 K 74 * * * 6614 * * 6765 6203 312 5821 5742 * * 4343 4192 6568 6592 * * * 74 13 6765 * 1000 1000 * * 4856 1000 0 V 75 * * * * * * * 1502 * 1794 * * 5742 5205 * 5495 * 1783 * * 75 18 6351 * 1585 585 * * 4856 1000 0 I 76 6203 6584 * * 5042 * * 2853 * 646 4972 * * * * * 6614 4097 4755 5020 76 27 5742 * 0 * * * 4856 1000 0 L 77 2108 * 6203 6373 * 971 * 4755 5290 5032 5086 * * * * 3498 5563 * * * 77 31 5568 * 670 1429 * * 4856 1567 0 A 78 3962 * 2223 5985 5259 5584 6270 * 2864 * 5894 2607 * 5735 2742 3888 3605 6687 * * 78 29 5672 * 1000 1000 * * 4856 1518 0 G 79 4411 * 5471 6379 * 348 * * * 5528 * * * 4067 5042 * 5568 * * * 79 168 3188 * 2184 359 * * 4856 3023 0 E 80 4140 * 2720 1213 * * * * 3117 5638 * 5526 * 5831 4553 4805 3562 5473 * * 80 107 3804 * 2491 283 * * 4856 2719 0 V 81 6351 5465 * * 3302 * 5742 2258 * 1012 6722 * 5104 * * * * 3470 * 6458 81 9 7255 * 1000 1000 * * 4856 1000 0 T 82 4489 * 3237 4313 5392 * 6579 * 2758 * * 3501 6037 * 4705 3455 1381 * * * 82 0 * * * * * * 4845 0 0 T 83 3955 * 4947 8307 6570 6362 5207 6821 1562 6019 * 5689 * 4976 3053 2958 3135 4209 7098 6427 83 14 6713 * 0 * * * 4845 1000 0 P 84 2477 * * * * 4364 * 6587 1625 * * 5414 1838 5547 * 4401 4941 4932 * * 84 0 * * * * * * 4845 0 0 V 85 * * * * 4360 * * 1871 * 1370 7818 * * * 6054 * 6037 2004 * 7169 85 0 * * * * * * 4845 0 0 T 86 7264 6524 3659 4886 * * 3950 6529 3735 6591 * 2946 6054 5862 4972 3461 1616 3354 * * 86 0 * * * * * * 4845 0 0 V 87 6633 * * * 4166 * * 1569 * 2472 6297 * * * * * * 1378 5688 * 87 0 * * * * * * 4845 0 0 R 88 4975 * * 2238 * * 3941 5081 2206 * * 6633 * 3931 3329 3544 3499 3835 * 5307 88 9 7381 * 0 * * * 4845 1000 0 G 89 1300 * 3749 4833 * 3722 * 4990 * 5497 * 6529 * * * * * 1586 * 6524 89 0 * * * * * * 4845 0 0 L 90 4143 * 2907 7818 8307 * 1756 4568 * 3065 * 3534 6791 5547 6736 2676 4319 * * 6376 90 47 4974 * 3815 106 * * 4845 1510 0 R 91 1981 * 5018 4961 5325 3578 5231 * 2131 6861 6799 * * 6591 2249 4471 7331 * * 5030 91 0 * * * * * * 4845 0 0 V 92 2022 5804 * * 1361 * * 2943 * 6916 * * * 5483 * 5675 * 2697 * 6353 92 28 5688 * 1000 1000 * * 4845 1070 0 T 93 * * 5804 5709 * * * * * * * * * * * 320 2625 * * * 93 0 * * * * * * 4845 0 0 K 94 1923 * 6440 2805 * 6802 6570 * 1755 * * 6558 6708 3571 3756 4037 6857 5806 * * 94 39 5237 * 1585 585 * * 4824 1000 0 G 95 3351 * 5050 5729 * 2539 * 6440 3224 6708 * 6475 5595 4321 4811 1494 3835 6618 * * 95 0 * * * * * * 4824 0 0 A 96 173 * * * * * * * * * * * * * * 6131 4488 4199 * * 96 0 * * * * * * 4824 0 0 R 97 4930 * * 3940 * * * 2400 1654 4166 * * * 4377 2191 6635 8060 4427 * 6413 97 0 * * * * * * 4824 0 0 A 98 2077 * 3767 1238 * * * * 4229 5792 * * * 4123 4792 4105 6618 4940 * * 98 0 * * * * * * 4824 0 0 A 99 1699 6413 * 6528 * 5237 6883 4458 1594 3815 4521 * * 5542 4555 5399 4522 6402 * * 99 0 * * * * * * 4824 0 0 I 100 * * * * * * * 691 * 3123 6941 * * * * * * 1956 * * 100 0 * * * * * * 4824 0 0 E 101 5663 * * 610 * * 6573 * 3040 * 6805 * * 4346 6858 4532 3588 * * * 101 0 * * * * * * 4824 0 0 A 102 1547 * * 4859 * 6859 5410 * 1952 5244 * 3762 * 3273 5353 3454 * 6219 * * 102 0 * * * * * * 4807 0 0 A 103 668 * * * * * * 6769 5561 3506 * 4328 * * * 3492 5556 3434 * * 103 0 * * * * * * 4769 0 0 G 104 * 6234 * * * 136 * * 4246 * * 5399 * * * * * * * * 104 0 * * * * * * 4847 0 0 G 105 5875 6632 * * * 168 * * * * * 6540 * * 5136 5396 * 5641 * * 105 0 * * * * * * 4847 0 0 K 106 4822 * * 4983 * 4719 * 6738 1837 * * 5507 * 4091 4527 1565 2863 7263 * * 106 0 * * * * * * 4748 0 0 I 107 2758 5184 * * 3143 * * 2154 * 5959 * * * * * * * 1088 * * 107 0 * * * * * * 4747 0 0 E 108 * * * 726 * * * 4571 2548 * * * * 2829 * 5674 5499 * * * 108 0 * * * * * * 4423 0 0 E 109 * * * 492 * * * * 1792 * * * * * * * * * * * 109 0 * * 0 * * * 3659 0 0 //