HHsearch 1.5 NAME c9h9wB_ FAM FILE c9h9wB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9h9wB_.a3m DATE Sat Mar 8 10:43:23 2025 LENG 103 match states, 103 columns in multiple alignment FILT 101 out of 908 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.5 EVD 0.4587 1.1482 SEQ >ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC CCC >ss_conf 9612899999999999997369999799999999840793316866489999999985974116885247789999999999999999999999999721 059 >Consensus xxxxxxxxrgxxxxILxlLxxxxxxGYeixkxixxxxxxxxxxsxgtiYxxLxrLexxGxIxxxxxrkxYxiTxxGxxxlxxxxxxxxxxxxxixxlxxx xxs >c9h9wB_ AEIPKEMLRAQTNILLNVLKQGDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGRKYYRLTEIGHENMRLAFESWSRVDKIIENLEAN KKS >UniRef50_D1YZ73(14-115:175) PadR-like family transcriptional regulator n=2 Tax=Methanocella paludicola SANAE RepID=D1YZ73_METPS E=6e-08 s/c=0.57 id=21% cov=92% --------RASLNyFVLMLLRTNPKHGYMLMQDIERHTQGHWRPSHSAIYKLLNRLETDGYITSWEEkdgervRRVYQISKEGVALLEASDRDFEsFINA FISSLLEAER- >UniRef50_C0QBE6(5-94:165) Transcriptional regulator (PadR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBE6_DESAH E=6e-09 s/c=0.69 id=24% cov=83% -------------MLLGFLMDGAKTGYEVKKYMEKSTHYFFNTGFSSIYPKYKKLEKEGRVRVSQEikngklNKVYTLTDEGKKAF----QEWLAVKPEI GRIRDEA-- >UniRef50_Q6L022(8-83:143) Hypothetical transcriptional regulatory protein n=1 Tax=Picrophilus torridus RepID=Q6L022_PICTO E=1e-09 s/c=0.85 id=22% cov=75% -------------LILDQIYYEEKKPYGIIKGIIEKFDERYKPSTGMIYPSLRRLQRENYIIKMESG--YKITDKGKEYFNKNFDEYTRFS--------- --- >UniRef50_B2I2U7(6-101:186) Predicted transcriptional regulator n=17 Tax=Acinetobacter RepID=B2I2U7_ACIBC E=7e-09 s/c=0.64 id=13% cov=88% -------------VLLTSLLERPSTGFELARRFDRSMGFFWNATHQQIYRELNNMLKKGWVSTlenemdSGRKKTYQVEQLGRIELASWMTQQSEPAQLR DDLMVRLRA >UniRef50_D0WKT0(2-109:113) Transcriptional regulator, PadR family n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WKT0_9ACTO E=4e-10 s/c=0.61 id=21% cov=97% ADEATQLRKGVLElAALAMLAPAPMYGAQIISALAEIEG--LAANSGTVYPMLTRLARTGRVAATWepsvrggpPRKYYSITAKGRKALVAQTAAWRTLA TAMNSILGDA-- >UniRef50_B8FUA4(15-110:112) Transcriptional regulator, PadR-like family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUA4_DESHD E=2e-09 s/c=0.66 id=23% cov=87% ----------TTFLVLLAVYQ-PNHGYGIMRFIETATKGRVTLGAGTLYGAINALVKKQWIapygdEADGKKKAYIITNTGKQKVAEELRRMDEVLRLAS TIIRE--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 423 * * * * * * * * * * * * * * 1975 * * * * 1 0 * * * * * * 2494 0 0 E 2 * * 1368 3177 * * * * 994 * * * * * * * * * * * 2 0 * * * * * * 3801 0 0 I 3 * * * 4005 4000 * * 1736 * 4051 1918 * * 3926 * * * 4018 3027 * 3 0 * * * * * * 4522 0 0 P 4 4187 4199 3283 4416 * 4221 * 4247 4157 * * 2705 2552 * * 1972 * * * * 4 0 * * * * * * 4678 0 0 K 5 4382 * * * * 4327 * * 1800 * * * * 3570 3384 3388 1783 4359 * * 5 0 * * * * * * 4777 0 0 E 6 * * 2013 1416 * * * * 4519 * * 3292 * 2439 * 4400 * * * * 6 0 * * * * * * 4777 0 0 M 7 3640 * * * 3636 * * 2398 * 1329 3034 * * * * * * 3541 4522 * 7 59 4647 * 0 * * * 5066 1000 0 L 8 * * * * 4680 * * 2248 3905 1714 3064 * * * 2409 4741 * * * 4889 8 62 * 4579 * * * * 5268 0 0 R 9 5070 * * * * * 4752 * 1824 * * * 4912 4833 1060 3282 * * * * 9 0 * * * * * 0 5456 0 1000 A 10 2550 * * * * 424 4546 * 4607 * * * * * * * * * * * 10 0 * * * * * 0 5456 0 1000 Q 11 4107 * * * 5121 * 4681 5046 * 2545 4904 5035 * 4892 * 3086 1751 3379 * 3966 11 0 * * * * 0 * 5515 0 1000 T 12 * * * * * * * 2791 * 1284 5123 * 4810 * 3492 5155 2745 4073 * 4183 12 75 4299 * 0 * * * 5663 1590 0 N 13 3604 * 2496 2556 4083 4271 * * 5453 5057 * 2927 5082 4041 * 4083 2987 * * * 13 320 2331 * 0 * * * 5899 3446 0 I 14 5165 6118 * * 2952 * * 2461 * 1613 3484 * * * * * * 2117 * * 14 146 3377 * 0 * * * 6556 3478 0 L 15 5520 * * * * * * 999 * 2349 4832 * * * * * 6543 2085 * * 15 59 4645 * 0 * * * 6782 2468 0 L 16 * * * * 6342 * * 5679 * 178 5326 * * * * * * 4651 * 5683 16 0 * * * * * * 6834 0 0 N 17 3011 6265 6411 5681 6547 2050 5070 5542 3350 3258 5622 4853 * 5000 6282 3442 4411 4019 7057 5755 17 20 6205 * 1000 1000 * * 6834 1000 0 V 18 3957 5063 * 4037 4476 * 5988 2964 6406 1350 4880 * * 4990 6254 4147 4962 3834 * 6081 18 0 * * * * * * 6834 0 0 L 19 6347 6205 * * * * * 3099 6342 473 * * * 6560 * * * 3133 * * 19 43 5085 * 825 1199 * * 6834 2061 0 K 20 2719 * 5689 4325 * * 6257 6362 3380 3824 3303 3724 * 5255 3353 2596 4798 4232 * 5002 20 13 6765 * 0 * * * 6829 1000 0 Q 21 4463 * 3923 1796 * 6323 6101 6028 2831 4094 6422 5733 6685 3236 3793 4413 4439 5397 * 5379 21 153 3827 5048 219 2825 * * 6844 3188 0 G 22 4673 * 5573 3113 * 2082 6718 6860 2671 * * 3132 * 3545 2780 5519 4806 * 6632 * 22 29 5659 * 0 * 0 * 6818 1745 2177 D 23 4850 * 2851 2385 * 6822 6028 * 5399 * * 4346 1288 4964 5377 3994 6649 * * * 23 80 4207 * 223 2804 * * 6844 3056 0 N 24 2892 5872 * 7019 6029 5885 6503 5217 3240 3362 2369 5709 * 4547 3594 2809 4827 6547 6121 5267 24 16 6503 * 0 * * * 6916 1000 0 Y 25 6061 4857 * * 6551 * 1714 * 5483 * * 4932 * * 6065 2817 2998 * * 1747 25 0 * * * * * * 6923 0 0 V 26 4050 * 6318 * * 395 * 6527 * 6321 * * 3517 5999 * 6061 * 5310 * * 26 0 * * * * * * 6923 0 0 Y 27 4580 * * 6460 5735 6281 5588 6582 5477 * * 5778 * 5570 6613 5044 5759 4401 * 482 27 0 * * * * * * 6923 0 0 G 28 3224 * 2597 1314 * 3893 * * 4493 6552 5759 * 6789 3562 4570 5319 5388 * * * 28 22 6070 * 0 * * * 6924 1000 0 I 29 6070 * * * * * * 1316 * 1267 3720 * * * * * * 3441 * * 29 0 * * * * * * 6924 0 0 I 30 2935 * * 6843 6552 5139 5349 2178 3375 3960 3663 5954 * 4366 3501 4702 3877 4176 * 5536 30 0 * * * * * * 6924 0 0 K 31 5709 * 5656 3320 * 5410 * 5966 1689 6311 * 4647 * 2142 2493 4519 6507 * * * 31 0 * * * * * * 6924 0 0 Q 32 4073 * 3929 2947 5862 5529 5621 4419 4132 3534 5605 5796 * 3236 2643 4314 4071 4380 * 4906 32 0 * * * * * * 6924 0 0 V 33 6465 * * * 3183 * 6728 1878 * 1591 3692 * * * * * * 2414 * * 33 50 * 4888 * * * * 6924 0 0 K 34 4772 * 3157 1954 5434 4306 * 5470 3573 4667 5722 4159 * 3567 2855 4695 5863 6491 * 6779 34 15 6608 * 0 * 583 1589 6876 1000 2330 E 35 3669 * 4365 1738 * 5486 5380 * 3096 5085 * 3423 * 2945 3425 6580 4599 * * 6349 35 38 6498 6056 1000 1000 0 * 6917 1000 1000 A 36 4063 5575 6642 4583 4581 5393 5812 4479 5042 2677 5040 4113 6492 6775 2417 3566 3903 4747 5293 4549 36 142 * 3416 * * * 0 6904 0 1000 S 37 4452 * * 4664 2688 2721 * 4401 * 4646 5125 5240 5637 6270 6376 2997 2114 4404 * 5881 37 98 * 3930 * * 2195 356 6810 0 4047 N 38 3816 * 3348 3886 6385 2239 4899 5541 3648 3615 5617 4344 5099 4148 * 3409 4879 * 6894 5004 38 71 * 4384 * * 1044 957 6748 0 4493 G 39 6638 * 3449 3440 4424 1670 5158 5025 4154 5499 6362 5752 3669 5424 4197 5136 5139 * * 3956 39 50 * 4872 * * 2218 349 6807 0 4291 E 40 4049 5620 5258 3113 2540 * 4769 4748 3763 3932 5118 4967 6719 6445 2793 * 5581 4062 5385 4015 40 73 5153 5569 863 1152 656 1453 6831 2277 4302 M 41 5111 5201 * * 2830 4841 * 3229 * 3834 5743 6492 6910 6349 3960 4890 5666 3507 2071 3356 41 110 3768 * 167 3195 602 1552 6862 3512 3332 E 42 4487 6772 5330 3555 * 4546 5781 5644 2410 4208 * 3579 4253 4539 3469 3399 3600 4720 * 5135 42 15 * 6613 * * 969 1032 6911 0 1717 L 43 3426 * 6043 6403 5095 5518 6814 1881 * 2751 5254 6270 2719 * * 6113 5193 2797 7212 5928 43 23 7212 6794 1000 1000 0 * 6917 1000 1724 N 44 3910 * 3574 4650 * 4105 6501 * 3412 * * 3138 3967 6684 6245 1408 4109 6457 * * 44 0 * * * * * 0 6920 0 1000 E 45 3420 * 3864 3340 5024 6883 2831 5612 4837 6052 6624 4026 3001 4123 4657 4506 3243 5846 6551 5818 45 25 5881 * 0 * 0 * 6920 1660 1000 A 46 4154 * * * * 876 * 6070 * * * 4334 5313 4527 6126 2549 4169 5318 * * 46 0 * * * * * * 6924 0 0 T 47 3461 * * * 6425 7081 * 6070 6500 6750 4660 5868 * 2780 * 2099 1681 3660 * 5144 47 0 * * * * * * 6924 0 0 L 48 5775 * * * 5447 6013 * 1659 * 1408 5674 * * * 6126 * 6070 2314 * * 48 0 * * * * * * 6924 0 0 Y 49 * * * * 6323 * 6445 6818 * 6680 * 6533 * 6060 * 6482 * 6070 * 143 49 0 * * * * * * 6924 0 0 T 50 4495 * 6556 * * 5294 6558 6610 4850 * 5239 4308 1288 4894 3278 3835 3098 5327 * 5103 50 0 * * * * * * 6924 0 0 I 51 2005 6629 * 3665 * 6635 6500 3182 6575 2679 4713 4905 * * * 5780 2506 3347 * * 51 0 * * * * * * 6924 0 0 F 52 * * * * 4651 * * 3524 * 348 6706 * 6126 * * * 6411 4589 * 6575 52 0 * * * * * * 6924 0 0 K 53 5120 * 3236 4242 * 5202 3952 6108 2090 * * 3814 * 4440 2464 4127 4293 6528 * 4220 53 0 * * * * * * 6924 0 0 R 54 5296 * 4574 5540 5764 * 5218 6126 2168 6860 6122 4481 * 4194 1246 4295 5273 * * 6967 54 0 * * * * * * 6924 0 0 L 55 * * * * 5026 * * * * 376 2485 * * * * * * * * 5645 55 17 6445 * 0 * * * 6924 1000 0 E 56 3782 5313 5588 1250 * * * 6798 4043 3273 * * * 4483 5341 3858 5025 3226 * 6396 56 0 * * * * * * 6924 0 0 K 57 2979 * 2769 2679 * 5770 5536 * 2436 * 6013 3985 * 3930 2721 5022 5719 * * * 57 16 6533 * 2585 263 * * 6924 1000 0 D 58 3378 * 2649 2300 * 5628 5272 6777 2506 5693 6633 3991 * 3466 4482 4513 5864 * * 5530 58 0 * * * * * * 6924 0 0 G 59 5625 6445 4662 4686 * 504 6750 * 4275 * * 3906 * 5234 5030 * * * * * 59 33 5455 * 2132 374 * * 6924 1678 0 I 60 5185 5347 * * 2832 6633 5218 4837 * 1559 4731 * * 5598 5082 * * 4835 3149 2638 60 0 * * * * * * 6924 0 0 I 61 5692 * * * * * * 1160 * 2470 * * * * * * 5511 1597 * * 61 207 2905 * 2522 276 * * 6924 4556 0 S 62 3773 6777 6831 1795 * * 6776 5570 3220 * * 6108 * 4545 3576 3369 2395 4179 * * 62 308 2381 * 2349 315 * * 6924 5322 0 S 63 3749 * 4585 3653 7069 3216 6728 6359 4003 * 5213 4063 6635 6933 5123 1741 3400 3934 * 6323 63 139 3443 * 2829 219 * * 6924 3878 0 Y 64 4455 * 4180 2903 5193 3879 5778 5579 4619 * 6531 5431 * 4397 2290 2903 4767 6013 6742 3195 64 225 2793 * 2706 240 * * 6924 4495 0 W 65 * * 5021 3587 * 3263 * * 4861 * 5656 4273 2457 4409 2541 * 4568 6558 2171 * 65 213 2868 * 2638 253 * * 6924 4525 0 G 66 4828 * 2603 2975 6536 2502 * 6360 4673 6833 5350 4220 3056 4370 3869 3910 4761 7176 * * 66 246 2675 * 2686 244 * * 6926 4692 0 R 67 * * * 4558 * 4676 6544 * 1691 5629 6508 6576 4772 6681 1184 * 5967 4210 * * 67 94 4597 5530 2182 359 * * 6926 2638 0 K 68 6043 * * * * * 6040 5368 1046 * * 4589 6637 5217 2102 * 3283 4417 * * 68 45 6409 5721 3000 193 * 0 6885 1000 1376 Y 69 5867 5582 * 4936 5001 * 6776 3216 6851 3296 4436 6284 5975 6325 5096 4290 3896 2551 6512 1975 69 15 6631 * 1000 1000 0 * 6882 1000 2238 Y 70 5967 * * * 3392 * * * * * * * * * * * * 6001 * 196 70 0 * * * * * * 6926 0 0 R 71 3099 * * 3207 * 5876 4138 4276 3194 * * * * 3084 2956 2978 3451 4751 * 4718 71 0 * * * * * * 6926 0 0 L 72 4609 * * * * * * 1255 * 1292 4845 * 6052 * * * * 3616 * * 72 0 * * * * * * 6926 0 0 T 73 * * * 5177 * 6585 * * * 6413 * 5312 * * 5766 4262 227 * * * 73 0 * * * * * * 6926 0 0 E 74 4059 * 1903 1556 * 5753 * * 4320 5798 6805 5657 2899 4833 6681 5074 * 6846 * * 74 22 6052 * 2807 222 * * 6926 1000 0 I 75 2628 * 4438 2479 * 6627 * 4654 2492 4285 * 5836 * 3968 4953 3115 3922 6325 * 5243 75 0 * * * * * * 6926 0 0 G 76 6015 * * * * 74 * * 5766 * * * * * 5967 * * * * * 76 0 * * * * * * 6926 0 0 H 77 5558 * * 3353 * * 6647 4430 2264 3527 5766 5312 * 3384 1776 5495 5772 4929 6630 6071 77 0 * * * * * * 6926 0 0 E 78 2857 * 3982 1885 6062 * 6940 5847 2570 5616 * 4636 * 3241 3964 4898 4447 * * 6754 78 0 * * * * * * 6926 0 0 N 79 2498 * 6001 3234 4378 7195 5471 5765 3915 3211 5504 5297 * 3647 4410 5044 4358 4551 * 2891 79 13 6820 * 2585 263 * * 6926 1000 0 M 80 3888 * * 6469 2265 * * 5038 * 920 6647 * * * 5224 6777 6833 4111 * 4589 80 33 6377 6560 2045 400 * * 6926 1639 0 R 81 3698 6573 3997 2682 6759 5440 4506 6349 2687 5245 * 3933 * 3562 2680 5284 5012 5522 * 4680 81 27 6850 6649 1000 1000 * 0 6904 1000 1000 L 82 4727 * 3727 1718 * 5446 6531 5074 3158 5061 * 3310 * 3606 3381 4204 4809 6909 * * 82 11 7066 * 1000 1000 * 0 6902 1000 1710 A 83 3855 6684 * 3365 5905 5359 4167 4450 4451 2628 4900 5035 6729 4500 4568 5731 5518 * 1920 6719 83 0 * * * * * 0 6889 0 1710 F 84 4657 6719 6715 5621 4940 * * 2806 3589 1652 3535 * * 5642 3689 5688 4141 3781 * 6440 84 18 * 6351 * * 0 * 6889 0 1710 E 85 2538 * 4777 2185 6341 6008 * * 3228 5585 6175 4373 6769 3639 2746 4770 3930 * * 6242 85 27 5730 * 2293 329 * 0 6856 1648 1000 S 86 4304 * 2872 1961 6013 5655 8079 4751 4668 4671 7056 4434 4941 4714 3064 3857 3926 6680 * 6310 86 59 5230 6254 2508 279 * 0 6803 1655 1000 W 87 4535 * * * 3311 5637 * 3980 4471 2127 4271 * 6203 6033 * * 6384 * 1689 3385 87 23 5968 * 2000 415 0 * 6639 1000 1771 S 88 3579 * 3318 2762 * 6579 6232 4685 3255 3785 * 4177 6185 3226 3467 3288 4541 * 5876 * 88 20 6170 * 0 * * * 6711 1000 0 R 89 3485 * 3655 3144 4977 6390 5330 6416 3153 6097 4721 4030 * 5093 1974 4249 4405 5154 * * 89 23 5955 * 2000 415 * * 6711 1000 0 V 90 4082 * 6137 * 3137 * 6184 3522 * 2092 3423 5979 5119 5122 3952 * 4197 3026 6390 4124 90 40 6321 6095 2000 415 * * 6711 1000 0 D 91 4239 * 4179 5028 4605 * * 4239 2425 3225 * 4607 * 3669 3665 2645 4289 5615 5143 5988 91 0 * * * * * 0 6693 0 1000 K 92 3827 * 3463 3063 5762 5172 6319 5375 2669 6355 * 4663 4006 3854 3717 2669 4382 6082 * * 92 0 * * * * * 0 6669 0 1000 I 93 2615 * 3821 3723 4010 4568 * 3145 4408 3286 6226 * * 4407 4248 3759 5024 3488 5916 * 93 0 * * * * 0 * 6596 0 1000 I 94 4222 * * 5401 6185 * * 1550 5005 1952 4225 * * * 4253 6236 * 2805 * 5990 94 0 * * * * * * 6629 0 0 E 95 3709 * 2314 2392 * 5059 * * 4469 * * 2557 5963 3361 4067 3356 * * * 5953 95 0 * * * * * * 6541 0 0 N 96 4593 * 3716 3480 * 5777 5131 4850 3753 5024 * 3296 7278 4471 2269 3227 3187 6058 * 6155 96 0 * * * * * * 6521 0 0 L 97 * * * * 2279 5899 * 2367 * 1277 5017 5808 * * 6026 * 5949 3713 * 6137 97 0 * * * * * * 6488 0 0 E 98 5844 * 5439 2573 * * * 3137 3917 2117 3878 5733 * 6008 4109 * * 2179 * * 98 0 * * * * * * 6394 0 0 A 99 2518 * 3275 3094 4513 3175 5588 * 3108 5651 * 3497 * 4488 5661 3487 5343 5200 * * 99 0 * * * * * * 6333 0 0 N 100 4455 * 3942 1675 5556 1979 * * * * * 3392 5507 * 3011 4060 * * * * 100 0 * * * * * * 6211 0 0 K 101 2252 * * 3006 * 5219 4861 4048 2178 3332 * * 4950 3406 4789 * * * * 4042 101 0 * * * * * * 5864 0 0 K 102 * * 4448 2893 4643 * * * 1803 3642 * * * * 1457 4359 * * * * 102 0 * * * * * * 5343 0 0 S 103 1700 * * * * * * * * * * 3904 * * * 837 3927 * * * 103 0 * * 0 * * * 4807 0 0 //