HHsearch 1.5 NAME c9h91W_ FAM FILE c9h91W_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9h91W_.a3m DATE Sat May 24 09:29:03 2025 LENG 93 match states, 93 columns in multiple alignment FILT 102 out of 235 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.4 EVD 0.4413 0.5618 SEQ >ss_pred CCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCEECCCCCCCCCCEEEEEEEECCCCCC >ss_conf 987788888760133489998856437909999778689899999999997793368899971886300165678479803999990699709 >Consensus xxxxxxxxxiikxPixTEKsxxxxexxnxyxFxVdxxatKxeIKxaiExlfxVkVxxVnTxxxxgkxkrxxxxxgxxxxxKKaiVtLxxgxxI >c9h91W_ MITEERILKVLRAPHISEKATMAAEKANTIVFKVAKDATKKEIKAAVEKLFEVEVKSVNTLITKGKTKRQGLRQGRRSDVKKAYVTLKEGQDL >UniRef50_Q4AAE2(2-88:167) 50S ribosomal protein L23 n=4 Tax=Mycoplasma RepID=RL23_MYCHJ E=2e-14 s/c=0.92 id=31% cov=91% --------EIIKGPILTEKSYQLM-SSGVYSFKVSPKTNRSETKKAVEYIFNVKVEKVNIFTVPKKEKKLGKSKGFTTKYKKALVKLMPGYTI >UniRef50_P19167(8-94:100) 50S ribosomal protein L23, chloroplastic n=1 Tax=Euglena gracilis RepID=RK23_EUGGR E=7e-12 s/c=0.82 id=20% cov=95% -----KFYDQFKYGILTDKTNKLL-KNNVYTFDVDIQMSKRQFKDLIETAFSVKITSVNSYVKSSKYYRSNNFEGMKKYYKRMFIKLNDLETI >UniRef50_O52334(2-88:108) 50S ribosomal protein L23 n=2 Tax=Mycoplasma RepID=RL23_MYCGA E=1e-10 s/c=0.78 id=30% cov=89% -----QITDVLIKPILTEKTYgIMMSEPRKYTFLVNAKANKNYIKQAFKAIYGVTPIAVNTKIKKPARVRTGtQNPGYSRLEKIAIITV------ >UniRef50_UPI00005A4969(61-135:175) PREDICTED: similar to 60S ribosomal protein L23a n=2 Tax=Eutheria RepID=UPI00005A4969 E=2e-08 s/c=0.80 id=29% cov=59% ---------IVKFSLTTKSAMKNIEDNNTFVFIVDAKANKHQIEQAGETLYDIDTANVTTLTC------------------------------ >UniRef50_Q2WGC1(7-87:99) 50S ribosomal protein L23, chloroplastic n=2 Tax=Selaginella RepID=RK23_SELUN E=2e-08 s/c=0.74 id=24% cov=81% -------------PVSTDKAIRLPER-KQYSSNAEPNPSKTEVKRRIERFPRVRIVAINSHRLPAGAARgsAGSVTGRRVRRKRMITTLR----- >UniRef50_Q9GYS9(41-110:159) Probable 39S ribosomal protein L23, mitochondrial n=2 Tax=Caenorhabditis RepID=RM23_CAEEL E=5e-06 s/c=0.75 id=23% cov=69% ---------------------------NCVKFEVDPRMSRHDIREYLTKIYDLPVRDVRTEVQMGDITwnskldhQYKKAMWKDEDKKIAYVFMSKG--- >UniRef50_B2X251(20-106:163) Ribosomal protein L23 n=3 Tax=Chlorophyta RepID=B2X251_9CHLO E=6e-19 s/c=1.09 id=26% cov=95% ------LFDLIKSPVFNFKSYNMLSEKKQYTFDVDLRLTKPQIQSLFLQAFGVNVIEVNTLIPPRKKRKYTAIAGYKNRFKRVFLTLKEDQSI >UniRef50_B6JWM1(34-93:164) Mitochondrial ribosomal protein subunit L23 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JWM1_SCHJY E=2e-05 s/c=0.84 id=27% cov=65% ------------------------------AFKVPLHVNKFDVRDYLLHVYNLKVLSVRSMIFARKLYRNRMGQVKRPkSIKKVIVEMEE---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 2491 0 0 I 2 * * * * * * * 2891 4015 3438 797 * * * * 3829 * 3944 * * 2 0 * * * * * * 3487 0 0 T 3 2426 * 3883 * * * 4062 * 2294 * * 1698 * 3973 * 4266 4095 * * * 3 0 * * * * * * 3574 0 0 E 4 * * 4331 2785 3631 * * * 2468 3911 * 1863 4153 4297 * 4469 * 4318 * * 4 0 * * * * * * 3637 0 0 E 5 * * 3234 2137 * * * 3072 3259 2583 * 4388 * 4297 * 4274 * 3631 * 4469 5 0 * * * * * * 3637 0 0 R 6 3779 * 4637 * * * 4524 * 1465 * * 1961 * 4827 2403 * * * * * 6 0 * * * * * * 3964 0 0 I 7 4032 * * * 4768 * 4283 2353 * 1654 2199 * 5422 * * 5301 * 5089 * 4589 7 24 5904 * 1000 1000 * * 4557 1000 0 L 8 * * * * 2303 * * 3200 5700 6534 3133 5389 * 5672 * 4114 4086 5778 * 1449 8 29 5631 * 0 * * * 5229 1000 0 K 9 4651 * 1361 3933 * 5886 6488 * 3257 * 6137 3686 5848 3663 4061 3139 6483 * * * 9 0 * * * * * * 5102 0 0 V 10 * * * * 4930 4979 * 1521 4159 2794 * * * 4740 * 6362 5993 1702 * 6123 10 0 * * * * * * 5285 0 0 L 11 * * * * 5644 * * 921 * 1427 * * * * * * * 3645 * * 11 17 * 6428 * * * * 5366 0 0 R 12 5867 * 6458 5353 * * 6010 2715 1094 3287 * * * 5346 3371 * 6203 3767 * * 12 0 * * * * * 0 5378 0 1000 A 13 4862 5398 * 5305 4285 3793 4137 * 2404 * 5434 5802 * 5344 3631 3085 3995 * * 2181 13 0 * * * * * 0 5378 0 1000 P 14 4114 * * * 6416 5748 * 5926 * * * * 436 4135 * 4219 * 4450 * * 14 37 5320 * 577 1601 0 * 5399 1753 1000 H 15 * * * * 6132 * 5256 2112 * 1966 5200 * * 6695 4565 * * 1689 5499 4034 15 0 * * * * * * 5410 0 0 I 16 4992 * * * 4184 * * 2140 5514 1954 * 6528 5512 6306 6527 4455 3728 2231 * 5936 16 19 6226 * 0 * * * 5410 1000 0 S 17 6303 * * * * * * * * * * 3781 * * * 2971 345 * * * 17 0 * * * * * * 5410 0 0 E 18 * * 2850 418 6298 5989 * * 6031 5979 * * 6303 * * * 5196 * * 6252 18 0 * * * * * * 5416 0 0 K 19 * * * 5409 * * * * 185 * * * * * 5470 4001 6407 * * * 19 19 6248 * 1000 1000 * * 5458 1000 0 A 20 2227 * * * * 4777 * 6353 5278 * 6384 4265 * 6251 * 1354 2239 4976 * * 20 33 5452 * 2542 272 * * 5458 1617 0 T 21 4240 5190 * 5928 5703 6098 * 3020 * 4054 3361 3497 * * * 3325 2170 3355 * 3639 21 35 6558 6245 0 * * * 5458 1000 0 M 22 3760 * 5118 4526 6675 4800 6736 4454 2779 3541 4036 3105 * 3885 3079 4042 4455 5199 * 5322 22 0 * * * * 0 * 5444 0 1000 A 23 3477 * 5231 4804 6098 * 6233 4464 3463 1472 3941 5146 * 3139 5105 4893 5522 5796 6146 * 23 65 5523 5483 3322 152 * * 5458 1062 0 A 24 3911 * * * * 4069 * 3038 4062 2059 3826 6098 5783 4341 3092 3745 4130 4750 * 6210 24 149 6113 3582 2322 322 0 * 5441 1000 1583 E 25 * * 3503 807 * 4065 * 6224 * 4640 * 5366 * 4630 * 3698 4426 5845 * 5558 25 79 6259 4634 0 * 0 * 5414 1000 2772 K 26 4184 * 4006 2619 5493 5964 * * 1811 6943 * 3385 * 3248 3582 4155 4830 6278 * * 26 341 * 2248 * * 0 * 5596 0 2084 A 27 4425 * 3425 3488 4572 4773 4508 5730 3795 3784 4788 2153 * 3903 6013 3850 4194 * * 5815 27 0 * * * * 0 * 5177 0 3945 N 28 * * 6546 6422 * 3331 * * 3242 * * 642 6395 * 4151 4262 * 6424 * * 28 25 7001 6688 3700 115 * * 5602 1000 0 T 29 * 4722 6748 5351 * * * 4880 1815 * * * * 2085 3585 6679 2683 3155 * 6229 29 0 * * * * 0 * 5768 0 1000 I 30 * * * * 5526 * * 3087 * 2643 6686 * * * * * * 3009 6229 854 30 0 * * * * * * 5824 0 0 V 31 3050 5479 * 5737 7026 5548 6796 * 5212 6774 5387 * 6856 5023 * 3627 1637 1783 * 7047 31 0 * * * * * * 5861 0 0 F 32 6862 * * * 259 * * 5140 * 4458 * * * * * 4849 * 4617 * 7266 32 0 * * * * * * 5861 0 0 K 33 5314 * 3374 3192 6435 * 6733 2523 2594 4349 6664 4458 6668 4453 3775 5798 7037 3539 6665 4212 33 0 * * * * * * 5861 0 0 V 34 3677 5550 * * * * * 4961 * 5157 * * * * * * 4292 341 * * 34 0 * * * * * * 5861 0 0 A 35 3284 * 1307 3623 5938 6664 4591 * 5694 6548 * 4116 3545 5750 4278 3514 6224 * * * 35 0 * * * * * * 5861 0 0 K 36 4707 6012 * 6541 * 6355 6711 4178 2480 3206 5218 6734 1941 6174 3103 5206 5452 3412 * * 36 13 6782 * 1585 585 * * 5872 1000 0 D 37 5523 * 2926 4205 5711 4579 4389 * 2316 7049 6218 3089 * 4496 2322 3661 6397 * 6743 * 37 0 * * * * * * 5872 0 0 A 38 1072 6874 * * * * * 5727 * 3021 3652 6218 5804 * * 3654 4779 3062 * 5197 38 0 * * * * * * 5872 0 0 T 39 6224 * 5514 * * 6019 6160 * 5315 * * 1329 * * 6060 2874 1471 * * * 39 0 * * * * * * 5890 0 0 K 40 * * * * * * * * 108 * * * * * 3794 * * * * * 40 14 * 6673 * * * * 5890 0 0 K 41 4544 * 5614 5270 5626 6699 4298 3490 4120 2922 * 6377 3080 5281 3800 4213 2201 5159 * 5355 41 0 * * * * * 0 5764 0 1000 E 42 6655 * 2630 1418 * 5461 6860 * 5408 5721 6036 5534 * 1956 6276 4844 5571 7411 6460 * 42 0 * * * * * 0 5657 0 1000 I 43 4964 * * * 5528 * * 721 * 3998 5397 * * * * * 6547 2043 * * 43 0 * * * * * 0 5657 0 1000 K 44 4671 * * 5517 * 6342 * * 539 * * * * 6737 2292 7075 * * 5845 * 44 0 * * * * 0 * 5657 0 1000 A 45 3069 * 4336 2699 * * 5167 6870 2075 5274 * 3791 * 3223 3131 4359 5321 6576 * * 45 0 * * * * * * 5765 0 0 A 46 981 5550 6931 3972 6188 * * 4447 * 3956 5680 6535 * * 5775 5683 * 5667 4618 2758 46 0 * * * * * * 5765 0 0 V 47 * * * * 2711 6464 * 1791 * 2510 6014 * * * * * * 1490 * * 47 0 * * * * * * 5765 0 0 E 48 6628 * * 588 6683 * * 5838 2939 5057 * 5787 * 4793 6352 4988 4677 * * * 48 25 * 5885 * * * * 5765 0 0 K 49 4820 * 5347 3138 5112 5756 5241 5617 1906 4642 * 5604 * 3800 3653 3156 3391 6368 * 4887 49 0 * * * * 0 * 5739 0 1000 L 50 3954 6427 * * 4059 * 5680 2224 5285 1516 4347 6597 * 6628 4449 * 5451 3487 * 5175 50 0 * * * * * * 5765 0 0 F 51 * 6092 * * 836 * * * * 4737 * * 5775 * * 7010 * * 5885 1536 51 31 5571 * 857 1158 * * 5765 1800 0 E 52 6132 * 2473 3949 * 2092 * * 2550 * * 1942 * 5286 5108 5594 * * * * 52 16 6459 * 0 * * * 5765 1000 0 V 53 6352 * * 5448 5607 * * 3258 5442 3610 6188 * * 6576 * 5346 5089 607 * * 53 25 * 5885 * * * * 5765 0 0 E 54 6039 * 4208 4425 * 6455 6161 * 1188 * * 3703 3434 4972 4422 4048 3294 * * 6695 54 0 * * * * * 0 5739 0 1000 V 55 * 7036 * * * * * 3642 * * * * 3219 * * * 4559 391 * * 55 0 * * * * 0 * 5739 0 1000 K 56 3191 * 4261 3202 * 6605 * 3024 3443 2662 * 5780 * 5623 5400 4162 3770 3000 * 5053 56 0 * * * * * * 5765 0 0 S 57 3071 * 2733 4523 * 4321 5680 * 1706 * * 4694 * 5840 3326 2775 6766 * * * 57 0 * * * * * * 5765 0 0 V 58 * 4817 * * * * * 2493 * * 4401 * * * * * 6276 461 * * 58 0 * * * * * * 5765 0 0 N 59 5909 5350 * * * * 6465 * 5219 * * 740 * 5188 2294 5098 4262 * 6731 * 59 0 * * * * * * 5765 0 0 T 60 * * * * * * * 3503 * 5506 6036 * * * * 2482 697 3671 * * 60 53 4790 * 2402 303 * * 5669 2082 0 L 61 6044 4905 * 5873 4974 * 3386 2931 * 1927 3217 * * 3920 5021 3741 5742 3828 * 4490 61 29 * 5632 * * * * 5506 0 0 I 62 * * * * * * 6016 1840 * 5086 5415 1483 * * 2950 5866 4239 3393 * * 62 0 * * * * 0 * 5455 0 1000 T 63 5212 5175 * 6881 5234 * * 4810 3970 3382 3919 6801 4337 4144 3760 4510 3230 2514 * 2895 63 9 * 7329 * * * * 5495 0 0 K 64 4544 6261 4401 4333 5749 * * 5723 2456 4194 4014 6271 1866 4792 3630 4161 5022 5646 * * 64 68 * 4447 * * * 0 5485 0 1000 G 65 5528 * 5928 5810 * 1053 * * 4017 5719 * 4369 2758 * 3251 4128 5439 * * * 65 20 6179 * 0 * * 0 5474 1000 2516 K 66 4816 * 5827 5534 * 3415 6475 5607 643 * * * * 5300 3441 5534 5620 * * * 66 17 * 6456 * * * 0 5474 0 2516 T 67 3732 5845 6275 5123 5831 5795 6578 3414 2224 4346 * 3902 4570 5250 3124 3979 3440 5563 * 4800 67 48 6563 5484 2585 263 * 0 5459 1000 2575 K 68 3923 6168 * * * 6279 * 5311 877 6708 * * * 5068 2197 5101 5152 * * 5442 68 130 3538 * 2230 346 * 0 5432 3051 2769 R 69 6182 6195 * * * * * * 2355 5301 6830 * * 4366 725 5256 6181 5277 6597 6197 69 59 4643 * 1000 1000 * 0 5419 2148 2769 Q 70 2806 5847 6306 6977 3225 6144 6311 4330 4263 4074 4136 4287 * 4716 3304 4066 5531 2676 * 4677 70 67 4787 6751 1056 946 * 0 5413 2058 2769 G 71 * * * * 4389 1576 * 5271 2362 6662 6053 3624 * * 2499 6362 3948 6194 * 5438 71 36 5341 * 0 * 2177 361 5414 1526 2824 L 72 4207 * 5785 * 4271 2612 5439 5418 2535 5176 5064 3701 4225 6682 2471 3913 5852 5425 * 6898 72 17 6453 * 2000 415 * 0 5413 1000 2769 R 73 4332 * * * 2814 3394 * 3021 3640 4771 4850 4829 * 6753 2671 4319 4528 3797 * 3805 73 53 5358 6396 1894 452 * 0 5413 1550 2769 Q 74 5186 * * 4219 4828 6171 * 3367 3741 2577 4123 4048 3665 4121 4729 3706 3430 4542 * 5253 74 65 4884 6651 2211 351 * 0 5410 1859 2822 G 75 4109 * * * * 533 5398 6318 * * * 4993 * 6172 * * 5403 4659 4990 3741 75 68 5506 5366 1334 729 2001 415 5413 1446 2882 R 76 6637 * * * 3858 * 3668 6258 1588 5141 5519 5659 6281 4328 2677 4490 6654 * * 2708 76 22 6058 * 1000 1000 2921 204 5393 1000 2602 R 77 6697 * 5549 4217 * * * * 2234 4369 * * 5764 5357 1732 6136 1881 5338 * * 77 63 4541 * 1441 663 520 1725 5369 2302 2564 S 78 3614 * 6038 4990 * * * 6724 2315 * 4976 3708 1962 6364 4863 2732 4199 4478 * * 78 17 6431 * 0 * * 0 5438 1000 1941 D 79 3817 * 1731 6584 5475 3164 4043 * 3656 5380 * 3946 * 7026 3107 3384 6550 * * 5370 79 39 5213 * 1810 484 * 0 5438 1630 1941 V 80 * * 6286 4388 3454 * * 5537 3547 3871 5551 * * * 3857 * 5270 3715 2727 1603 80 14 6690 * 3000 193 0 * 5438 1000 1941 K 81 * * * * * * * * 161 * * * * 5430 3596 * * * * * 81 0 * * * * * * 5479 0 0 K 82 5430 * * * * * 6285 4975 552 4521 * * * * 2577 * * 4675 * * 82 0 * * * * * * 5479 0 0 A 83 543 * * * 5233 * * 5903 * * 2926 * * * * * * 2849 * * 83 0 * * * * * * 5479 0 0 Y 84 * * 5428 * 3644 * * 1218 * 5144 6660 * * * * 6283 5004 3396 * 1787 84 0 * * * * * * 5479 0 0 V 85 * 6320 * * 4095 * * 2268 * 4420 * * * * * * 5614 612 * * 85 0 * * * * * * 5479 0 0 T 86 4885 * 6521 6421 5559 * 5430 5251 3140 * * * * 4325 2788 3782 1235 4762 * 5038 86 0 * * * * * * 5474 0 0 L 87 * * * * 4394 * * 4875 * 322 4130 * * * * 5410 * 4728 * * 87 0 * * * * * * 5474 0 0 K 88 2843 * 3406 3955 * 6156 6875 * 1964 5231 5481 4911 3936 4292 3263 4248 6260 5254 * 5143 88 0 * * * * * * 5475 0 0 E 89 3872 * 3480 1799 * 5020 * * 2474 * 5299 6407 2646 4265 6153 4401 6473 5490 * * 89 45 5013 * 669 1430 * * 5403 1553 0 G 90 * * 2790 4872 * 555 * * 5085 5871 * 4023 6459 * * 5556 * * * * 90 0 * * * * * * 5426 0 0 Q 91 6008 * 2286 2665 * * 4208 5800 4690 * * 4311 * 2028 * 4317 * 5810 * 2762 91 0 * * * * * * 5234 0 0 D 92 5675 * 3192 3958 5704 * * * 2389 5723 * 4911 * 4992 4815 1857 2312 * * * 92 0 * * * * * * 5152 0 0 L 93 * * * * * * * 340 * 2719 5685 * * * * * * 4690 * * 93 0 * * 0 * * * 4799 0 0 //