HHsearch 1.5 NAME c9grxO_ FAM FILE c9grxO_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9grxO_.a3m DATE Sat Feb 15 10:04:46 2025 LENG 100 match states, 100 columns in multiple alignment FILT 104 out of 204 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.5 EVD 0.4582 -0.1146 SEQ >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC >ss_conf 9178999999999999999999832199999999999999999999996203867874079999999999999999999999999972897999964069 >Consensus mxlxxxlxxaxxLfxiGlxgxlxxRnlixiligielmxnavxlxxvxxxxxxxxxdpxgqxlxLxxIvIaaaexAvxLalxixxyrxxgtxdxdxxxxLx >c9grxO_ MILEHVLVLSAFLFSIGIYGLVTSRNLVRALMCLELILNAVNLNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVSSIYRNRKSIRINQSNLLN >UniRef50_Q057W6(2-99:100) NADH-quinone oxidoreductase subunit K n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=NUOK_BUCCC E=2e-08 s/c=0.61 id=27% cov=99% LSLNYGFTISIILFFIGIISLLIHKNLIFILVSLEVLINSIILGFILIGKYW--KQIDCCVLYIFIVTIATVEVSVMLAIFLRIYQRYHTLDIYKLREIS >UniRef50_C6A3Z8(5-119:121) Membrane-bound hydrogenase MBH 2, subunit Mbh2G (Na+/H+ transporter subunit) n=4 Tax=cellular organisms RepID=C6A3Z8_THESM E=6e-06 s/c=0.45 id=21% cov=100% LFVNFPFIVVALLLALGFYTIGFKRNLIKVVIGVEILEGAVNMFIVALGYVKGGYTpiytqapqeavgkmvlPTPQALTLTSIVIGVAVTALMLAFAVNI YRHYGTLDVTRVRRL- >UniRef50_D2SDG1(5-103:105) NADH-ubiquinone oxidoreductase chain 4L n=4 Tax=Actinomycetales RepID=D2SDG1_9ACTO E=1e-08 s/c=0.61 id=28% cov=100% LVLQVVLTVAAALIGVGVFGALSQQSIVMIMMGLELALNGVLLGGAAAWYFLAPEVPDGQLVVVVALVVMAVEMAMGFAATIAIYRARQVDMVDMATDL- >UniRef50_C7R2S9(4-110:159) NADH-ubiquinone oxidoreductase chain 4L n=2 Tax=Micrococcineae RepID=C7R2S9_JONDD E=1e-06 s/c=0.50 id=20% cov=96% MVPSLMLVLAVGAFVTAGVYLLLERSLTRVLVGFILISNGVNILLLLSGGKAGGapivgvtaeedmADPLAQFMILTAIVITFGLTAFILAMAYRSWQMH GHDEVQD----- >UniRef50_Q3JBL4(8-100:105) NADH-ubiquinone oxidoreductase, chain 4L n=3 Tax=Proteobacteria RepID=Q3JBL4_NITOC E=2e-06 s/c=0.57 id=18% cov=91% -----YILTGIGLFILGLYALFVHSHLLRKILALNIMASGVFLVYVAAAYRSPEAisDPVPQAMVLTGIVVASASMLLGLALAARVKAKTGRTELDD--- -- >UniRef50_B8DS09(3-100:104) NADH-ubiquinone oxidoreductase chain 4L n=6 Tax=Desulfovibrionales RepID=B8DS09_DESVM E=0.0001 s/c=0.49 id=28% cov=95% -----YQLASLVLLGAGLAGLVKRRTLVGMLIAVELMLNGAGLSIVAATQLTGADPALGQLATLLVMGLAAAEATVALAAIVVVFRRFGTTRTDALATL- >UniRef50_C0XU59(3-87:140) Monovalent cation/H+ antiporter subunit C n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XU59_9CORY E=0.0002 s/c=0.55 id=21% cov=42% ------LALSVGILMAGAVYLMMRPDMFRITIGFVMLSHAANLVIMS----------------------------------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 1717 * 2436 1111 * * * * * * 4380 * * 1 0 * * * * * * 4879 0 0 I 2 5240 * * * 4339 * * 2934 * * 5402 3875 2329 * 5115 3124 1898 3463 * * 2 0 * * * * * * 4876 0 0 L 3 * * * * 6066 * * 4240 * 1013 3681 * 4592 * * 5275 4263 2142 * 6291 3 0 * * * * * * 5016 0 0 E 4 6443 * 3763 3005 5891 4405 * 5570 * 5984 6080 3450 * 4002 5244 2763 2161 4817 * 3507 4 0 * * * * * * 5094 0 0 H 5 4445 * * 5757 3746 5996 2194 * * 2437 * 3172 * 5986 * 4732 3238 4031 6143 3374 5 0 * * * * * * 5131 0 0 V 6 3063 5340 * * 3067 4254 * 5413 * 3876 5549 6197 5914 * * 4620 * 3089 * 1386 6 0 * * * * * * 5175 0 0 L 7 5224 * * * 3858 * 6015 3480 * 671 4706 * * 6119 * * 4934 4186 * 5013 7 0 * * * * * * 5235 0 0 V 8 3032 6199 * * 3264 * * 2174 * 2243 * * * * * 6703 3787 2308 * 4530 8 18 * 6361 * * * * 5331 0 0 L 9 4720 * * * 3698 6618 * 3144 * 1464 5945 * * * * * 3697 1709 * * 9 37 6619 6028 0 * 0 * 5393 1000 1000 S 10 1200 5969 * * 5556 3490 * 5436 * * 6100 6714 6722 * * 1577 4770 6667 * * 10 36 6423 6235 0 * 0 * 5420 1000 1000 A 11 1772 * * * 3406 2875 * 3266 * 3573 4450 5998 * * * 4844 3886 3002 * * 11 0 * * * * 0 * 5435 0 1000 F 12 2621 5134 * * 6656 2943 * 2258 * 2074 4527 * * * * * 6780 2693 6022 * 12 15 * 6570 * * * * 5476 0 0 L 13 6241 * * * 5534 * * 3767 * 510 3363 * * * * * * 3440 * * 13 0 * * * * 0 * 5509 0 1000 F 14 * * * * 559 * * 4100 * 3299 4232 * * * * * 6526 3361 * * 14 0 * * * * * * 5513 0 0 S 15 2364 3472 * * 3318 2739 * 6050 * 3377 5311 * * * * 3226 3972 3054 5254 6406 15 0 * * * * * * 5513 0 0 I 16 3366 5537 * * 5162 5565 * 1229 * 2562 5065 * * * * 5699 4631 2871 6606 * 16 18 6310 * 1000 1000 * * 5542 1000 0 G 17 4204 * * * * 121 * * * * * * * * * 5243 * * * * 17 0 * * * * * * 5542 0 0 I 18 3780 * * * 3912 3699 * 3180 * 1089 5852 * * * * 6707 5308 2725 * * 18 0 * * * * * * 5541 0 0 Y 19 3736 7142 * * 3135 5569 * 2924 * 3342 5255 * * * * * 5567 3352 5076 1404 19 106 * 3821 * * * * 5541 0 0 G 20 4008 4247 * * * 767 * 3949 * * 4913 6610 * * * 6385 4055 5423 * 3414 20 27 5775 * 0 * 0 * 5501 1486 2285 L 21 2964 * * * 4324 * * 3032 * 1581 3691 * * * * 6707 6363 1910 * * 21 23 5996 * 0 * * * 5538 1437 0 V 22 3667 6226 * * 5083 6800 * 3136 * 1280 3059 * * * * * 4673 2437 * * 22 0 * * * * * * 5538 0 0 T 23 3254 * * * 5015 6280 * 3798 5868 2143 5580 4142 * 6861 6969 3582 2380 2728 * 6025 23 39 5212 * 0 * * * 5539 1677 0 S 24 * * 4618 4227 * 6438 4592 6560 2758 * * 3555 * 3675 1358 3192 5577 * 6585 * 24 12 6960 * 0 * * * 5539 1000 0 R 25 6438 * 6560 * * * * * 2180 * * 6296 5948 4571 680 5060 5528 * * 6618 25 46 4996 * 0 * * * 5539 1959 0 N 26 5932 * 3980 6949 * * 4620 * * * * 686 * 5118 6456 2627 5220 5570 * * 26 21 6134 * 0 * * * 5539 1000 0 L 27 3167 * * * 4231 6912 * 2791 * 1061 3134 * * * * * * 3705 6287 * 27 0 * * * * * * 5557 0 0 V 28 * * * * 4855 * * 1303 * 1994 5751 * * * * 6835 4365 2100 * * 28 0 * * * * * * 5557 0 0 R 29 4957 * * * 3570 4944 6108 3290 2097 4465 3492 * * * 2047 * 4519 3808 * 6712 29 17 6446 * 0 * * * 5557 1000 0 A 30 4724 * * * 7044 * * 1934 3037 3857 2612 * * * 5547 6267 4875 1889 * * 30 0 * * * * * * 5557 0 0 L 31 6314 * * * 3670 * * 2253 * 1008 3792 * * * * * 7114 3135 * 6858 31 0 * * * * * * 5557 0 0 M 32 6890 * * * 4597 5207 * 1871 * 1915 1767 * * * * * * 3461 * * 32 0 * * * * * * 5557 0 0 C 33 3118 3370 * * 6831 1083 * * * * 6217 * * * * 1767 * * * * 33 0 * * * * * * 5557 0 0 L 34 4976 * * * 3900 * * 1894 * 1641 3711 * * * * 6274 4730 2438 * * 34 0 * * * * * * 5557 0 0 E 35 6864 * 5432 762 * 5533 * 4897 * 5218 5045 3394 * 6074 * 3611 5023 4894 * 6611 35 0 * * * * * * 5557 0 0 L 36 6133 * * * 4581 * * 1860 * 1048 4124 * * * * * 6324 3119 * * 36 0 * * * * * * 5557 0 0 I 37 4638 6108 * * 4753 * * 2475 * 2650 1151 * * * * 5483 6446 3557 * * 37 0 * * * * * * 5557 0 0 L 38 6287 * 5750 4265 4229 3114 * 3897 * 1365 4639 4989 * 3746 * 3372 4818 6138 * * 38 0 * * * * * * 5557 0 0 N 39 4119 * 6217 6555 6145 5119 4073 * 5289 3577 6074 1169 * 5351 * 3286 3452 * * 5124 39 16 6514 * 0 * * * 5557 1000 0 A 40 1020 * * * * 1627 * * * * * * * * * 2565 * 6145 * * 40 0 * * * * * * 5557 0 0 V 41 1737 4679 * * * * * 2591 * 6331 * * * * * 5094 4494 1290 * * 41 0 * * * * * * 5557 0 0 N 42 4127 * * 6643 4550 5067 5839 2842 * 3477 4438 1171 * * * 5907 5610 4706 * 4388 42 0 * * * * * * 5557 0 0 L 43 6317 * * * 3579 * * 2919 * 770 3915 * * * * 5332 6913 3542 * * 43 0 * * * * * * 5557 0 0 N 44 2696 * * * 2429 5408 * 6301 * 2229 6330 2527 * * 6145 3186 4806 4480 6890 6441 44 0 * * * * * * 5554 0 0 F 45 5170 * * * 1478 6361 * 2903 * 1384 4928 * * * * * * 5866 6704 5355 45 0 * * * * * * 5554 0 0 V 46 3564 5447 * * 4673 6441 * 1825 * 2537 5961 * * * * * 6301 1480 * * 46 0 * * * * * * 5554 0 0 T 47 1759 * * 6071 5699 3286 * 3865 * 3452 5866 * * * * 2399 2799 4786 * 5563 47 15 6577 * 3585 126 * * 5554 1000 0 F 48 2342 * * * 1653 6590 * 3069 6726 3314 4223 * * * * 3782 4971 4825 5477 5093 48 18 6316 * 3700 115 * * 5542 1000 0 S 49 2080 * 6003 * 6375 1332 * * * * * 4575 * * * 2386 5387 6087 3904 * 49 47 6301 5698 0 * * * 5542 1000 0 D 50 3691 * 5188 * 4235 3240 5944 * 5119 4551 7081 4974 6075 4471 2504 3120 7408 5170 * 2156 50 79 4844 5737 3361 148 986 1015 5524 2357 1621 F 51 5306 * * 6278 3236 6537 4214 4103 3840 3082 4409 6980 6888 5453 3014 5288 4437 3618 5262 2685 51 120 4494 4817 3999 93 1577 589 5514 2321 1889 F 52 4287 * 5613 3966 3631 5289 3374 6145 4553 2407 5784 7087 4617 6817 4912 3648 3688 6899 3298 4624 52 126 5672 3971 539 1682 1595 580 5510 1634 2584 D 53 4029 * 2968 4406 5048 1368 5356 * 5579 * * 3330 3922 4779 5032 4802 * 5444 6694 * 53 347 3773 2832 3234 162 1848 470 5546 2831 3124 S 54 2449 * 5360 * * 3059 4512 5357 4836 5066 4728 2759 3528 5648 4083 3068 5757 6142 * 4781 54 322 2844 4039 3779 109 1378 701 5465 3498 3595 R 55 1826 * 5555 4281 * 5447 4159 4721 6152 6130 6491 5657 4083 3842 4987 3694 2988 3588 * 5486 55 306 2844 4274 3792 108 549 1660 5441 3182 3615 Q 56 5860 * 894 5683 * 4308 * 6006 * 6848 * 3109 5090 3616 * 4717 4836 5126 6528 6473 56 106 5887 4215 3444 139 209 2891 5443 1595 3388 L 57 4195 * * 6575 4605 6735 * 2869 * 3340 4784 * 1067 6138 6981 * 5133 5450 6500 4303 57 0 * * * * 2428 296 5459 0 2867 K 58 4191 * 3481 4819 6155 4573 7121 4705 6638 1889 5255 6653 6558 5584 4872 3846 3532 2466 * * 58 54 6774 5162 2000 415 0 * 5485 1000 2644 G 59 4006 6421 * * * 1047 * * * 6685 6085 * 1441 * * 5244 * 5442 * * 59 0 * * * * 0 * 5505 0 1511 N 60 4677 6441 * 6073 5688 5828 3436 6632 * 5081 6584 6695 6839 720 6087 4105 6098 5221 * 6003 60 21 * 6098 * * * * 5542 0 0 I 61 1442 * * 6939 5413 4589 6173 2711 * 3912 5745 6703 * * * 4683 4681 2186 * * 61 0 * * * * * 0 5493 0 1000 F 62 4329 * * * 1919 * * 3769 * 1284 2697 * * * * * * 4695 * 6823 62 0 * * * * 0 * 5493 0 1000 S 63 2647 6705 * * 6227 7010 * 2649 * 6281 4201 * 4872 * * 3142 2925 1806 * 5791 63 0 * * * * * * 5542 0 0 I 64 * * * * 3904 * * 2535 * 678 5020 * * * * * * 3503 * 5902 64 0 * * * * * * 5542 0 0 F 65 * * * * 1728 * * 3793 * 3621 4881 * * * * * 1259 4068 * 4913 65 0 * * * * * * 5542 0 0 V 66 1676 6124 6110 * * 4214 * 2216 * 4591 6228 * * * * 3051 5804 2353 * * 66 0 * * * * * * 5542 0 0 I 67 * * * * 6657 * * 606 * 3083 3187 * * * * * 5223 3873 * 6632 67 0 * * * * * * 5542 0 0 A 68 2478 6450 * * * 4152 * 6086 * 6087 * * * * * 4669 2576 953 * * 68 0 * * * * * * 5542 0 0 I 69 4378 * * * 5162 * * 1054 * 2986 6285 * * * * * * 1721 * * 69 0 * * * * * * 5542 0 0 A 70 1092 * 6303 4897 * 1800 * * * * 4340 * * * * 3325 4374 * * * 70 0 * * * * * * 5542 0 0 A 71 1227 * * * 2897 4777 * 5235 * 3773 5027 * * * * 4427 4293 2520 * * 71 0 * * * * * * 5542 0 0 A 72 931 3416 * * * 3459 * 6808 * 5133 * * * * * 3103 4873 3280 * * 72 0 * * * * * * 5542 0 0 E 73 5126 * 6767 855 * 6452 * 5111 * 3799 6204 * * * * 6702 3185 2609 * * 73 0 * * * * * * 5542 0 0 A 74 2333 * * * 6354 * * 4748 6639 4138 4024 6204 * 4812 * 3496 1954 2133 * * 74 0 * * * * * * 5542 0 0 A 75 521 6670 * * * 3728 * 5164 * * * * * * * 3198 4860 4423 * * 75 0 * * * * * * 5542 0 0 I 76 5902 * * * 3109 * * 2317 * 2139 4504 * * * * * * 1337 * * 76 0 * * * * * * 5542 0 0 G 77 1871 * * * 4793 1320 * 4667 * 2840 3715 * * * * 5638 * 6086 * * 77 0 * * * * * * 5542 0 0 P 78 4377 * * * 4060 * * 4048 * 497 4701 * 6695 * * * 5684 4180 * * 78 0 * * * * * * 5542 0 0 A 79 814 * * * * 3127 * * 6301 5902 6086 * 6657 * * 3091 3716 3854 * * 79 0 * * * * * * 5542 0 0 I 80 5166 * * * 5851 6316 * 1616 * 1343 3623 * * * * 6285 * 3256 * 5430 80 0 * * * * * * 5542 0 0 V 81 1998 4968 * * 4429 6409 * 1990 * 2791 5955 * * * * 6124 4468 2415 * * 81 16 * 6485 * * * * 5542 0 0 S 82 5579 * * * 5630 * * 1827 * 2356 4360 * * 6270 5469 5569 5306 1869 * 3691 82 0 * * * * * 0 5503 0 1000 S 83 2390 * * 6847 * 5259 6379 5602 4432 2934 5610 4153 * 4326 1925 4023 5739 3966 6256 5847 83 0 * * * * * 0 5500 0 1000 I 84 3599 * * * 3465 6379 5451 1984 * 2080 5177 6462 * 5729 6372 3775 4589 4438 6964 3965 84 0 * * * * 0 * 5500 0 1000 Y 85 5125 * * 6338 2236 * 3478 6073 6262 * * * * 6924 6398 4939 * 4784 6164 926 85 0 * * * * * * 5513 0 0 R 86 * * 6683 4295 * * 5219 * 2750 * * 4736 * 3427 743 6492 6184 6515 * * 86 0 * * * * * * 5504 0 0 N 87 3312 * 6484 4176 * 5323 3085 4968 3490 4628 4341 3146 * 3977 2776 3818 4502 5415 * 5777 87 0 * * * * * * 5504 0 0 R 88 4740 * * * 3632 5202 3028 6508 3095 4005 6693 * * 7172 1982 5362 3881 * 6228 2585 88 0 * * * * * * 5508 0 0 K 89 6226 * 5898 5656 * 1046 4772 6182 3044 6228 * 4131 6230 4104 3682 4152 5783 * * * 89 0 * * * * * * 5508 0 0 S 90 3906 * 4917 5848 * * 4729 6304 5665 6199 * 3824 * * 6385 1957 1197 5446 * * 90 0 * * * * * * 5497 0 0 I 91 6179 * 3244 5816 5128 * * 2063 * 1757 * * 6395 * 6174 6868 3861 2352 * * 91 0 * * * * * * 5497 0 0 R 92 5522 * 958 3406 6226 * * 5848 7240 * 5170 3063 * 5380 3786 3848 * 5773 * * 92 0 * * * * * * 5497 0 0 I 93 4385 * 6208 4814 * 6492 * 2327 * 2897 5279 * 4410 6302 * 6450 2992 1670 5546 * 93 0 * * * * * * 5486 0 0 N 94 6077 * 1208 2068 * 6761 * * 5514 5041 * 4930 * 5003 4426 4076 4553 * * 4646 94 0 * * * * * * 5476 0 0 Q 95 4205 * 2690 2222 6752 * * * 2286 * 6126 4798 * 3388 3984 3924 4307 5539 * 6027 95 0 * * * * * * 5450 0 0 S 96 3038 * * * 3376 * * 2028 * 1731 4073 * * * * 6279 * 3124 * 4367 96 0 * * * * * * 5331 0 0 N 97 6039 * 3105 5524 * 6494 6211 * 3915 * * 2559 * 5408 1721 3157 2764 * * * 97 0 * * * * * * 5244 0 0 L 98 4902 * 4219 2142 * 4842 * 5125 4571 3243 4253 4086 5460 5471 3250 3283 3175 * * * 98 0 * * * * * * 5038 0 0 L 99 * * * * * * * 5544 * 302 2580 * * * * * * * * * 99 0 * * * * * * 4965 0 0 N 100 * * 2960 * * * * * * * * 1623 * * * 1162 3324 * * * 100 0 * * 0 * * * 3626 0 0 //