HHsearch 1.5 NAME c9g9tF_ FAM FILE c9g9tF_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9g9tF_.a3m DATE Sat Jun 21 10:44:31 2025 LENG 88 match states, 88 columns in multiple alignment FILT 57 out of 59 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.2 EVD 0.4454 0.2502 SEQ >ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCC >ss_conf 9875204996474448887710024396899989978731789999999999862478886576899999999999520389998539 >Consensus xxxxxxxfxxxxpxxxpxxxxxeexVDPxxxLrexCxxxCxxxxxxyxxCxxRVxsxsxxxexCxeexfdxxhCvDxCvapkLFxxLK >c9g9tF_ SYPYYCEFFVKFPNYIPPKDPAERLVDPRQKLEPGCTARCSLWVNEYDACTKRVRARTDNKGNCSGQYEELHVCIDRCVAKDIFKYLK >UniRef50_A8P2D7(105-176:176) Ubiquinol-cytochrome C reductase hinge protein n=2 Tax=Chromadorea RepID=A8P2D7_BRUMA E=8e-19 s/c=1.31 id=26% cov=83% ----------------PLTVDEEEVMDSLIKFREECIAHTGKWKKLLDECTERVNSKAKTKESCHYEMVDYIQALDHCAMPKAFAALK >UniRef50_B6U556(1-61:102) Ubiquinol-cytochrome c reductase complex 7.8 kDa protein n=1 Tax=Zea mays RepID=B6U556_MAIZE E=2e-13 s/c=1.26 id=32% cov=68% ---------------------DAEPVDQKNYLEERCKPQCVKTLYDYEKCVKRVESDGSGQKHCTGQYFDYWSCVDKCVS-------- >UniRef50_C1BSF9(26-90:90) Cytochrome b-c1 complex subunit 6, mitochondrial n=1 Tax=Lepeophtheirus salmonis RepID=C1BSF9_9MAXI E=4e-12 s/c=1.11 id=28% cov=74% ------------------------LVDPAVEIKERCKTQaCTSYVTRLETCNDRVNSKSKTSETCLEEIMDLVHCIDHCASPQVIKLCK >UniRef50_B8CBP1(8-78:78) Ubiquinol cytochrome c reductase (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CBP1_THAPS E=1e-12 s/c=1.04 id=38% cov=75% ---------------------EEEVVDHLPQLKASCAKHCPAQKKEYDACVNRITK--LGEGDCEAWYFDLLHCVDHCVAPQAFKKLK >UniRef50_Q4Q603(57-141:141) Ubiquinol-cytochrome-c reductase-like protein n=5 Tax=Trypanosomatidae RepID=Q4Q603_LEIMA E=2e-16 s/c=1.02 id=29% cov=95% ----SPTFQESTGPFNCPAMAS-DPVDIKLDLEKECLAnECVKKVGAYNACLERIKTVSPEKEpHCYNQYFAIVHCVDVCVDPKLWPTLK >UniRef50_Q7QKB0(10-90:90) AGAP002245-PA (Fragment) n=3 Tax=Endopterygota RepID=Q7QKB0_ANOGA E=1e-15 s/c=1.04 id=29% cov=89% -----------FSSFFPTVKaqEEEDIVDPQTVLREKCAQHGSAPqlWEKYQACNERVGSRSQTAETCVEELFDYLHELDHCVTKTLFSKLK >UniRef50_A6QW11(57-126:126) Predicted protein n=2 Tax=Ajellomyces capsulatus RepID=A6QW11_AJECN E=2e-10 s/c=0.95 id=27% cov=72% --------------------------DIKPKLEEECAnsSKCAPAKHHFNECVERVTRNSEdpdfkgPHEDCVEEFFHLQHCATQCAAPKLFRALK >UniRef50_A0CBT7(29-107:116) Chromosome undetermined scaffold_165, whole genome shotgun sequence n=3 Tax=Paramecium tetraurelia RepID=A0CBT7_PARTE E=1e-13 s/c=0.98 id=27% cov=88% ----------NYPSAIKTMLEQGK--DPKDLLIQYCRPQCKWYDDKYDRCVKAFLSlkNADPEKNCMYPYRDLVTCVEACVQPKIQHALR >UniRef50_Q1ZXP3(12-69:69) Probable cytochrome b-c1 complex subunit 6 n=1 Tax=Dictyostelium discoideum RepID=QCR6_DICDI E=6e-08 s/c=1.01 id=40% cov=66% -------------------------------IQEGCASGCEKSWSAYQACSGRVaKLEHDEKANCLGQFLEHVQCIDKCVGPKLFAQLK # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 1918 * * * * * * * * * * * * * * 443 * * * * 1 0 * * * * * * 1960 0 0 Y 2 * * * * 1864 * * * * * * * * * * * * * * 463 2 0 * * * * * * 1960 0 0 P 3 * * * * * * * * * * * * 463 * * 1864 * * * * 3 0 * * * * * * 1960 0 0 Y 4 * * * * * * * * * * * * * * * * * * * 0 4 0 * * * * * * 1960 0 0 Y 5 * * * * * * * * 2342 * * * * * * 1145 * * * 1512 5 0 * * * * * * 2404 0 0 C 6 * 2536 * * * * * * * * * * 623 * * * 2489 * * * 6 0 * * * * * * 2404 0 0 E 7 * * * 1512 * * * * * * * * * * * * 623 * * * 7 0 * * * * * * 2404 0 0 F 8 * * * * 0 * * * * * * * * * * * * * * * 8 0 * * * * * * 2523 0 0 F 9 * * * * 675 * * * * * 2693 * * 2190 * * * * * * 9 0 * * * * * * 2523 0 0 V 10 2542 * * 2190 * * * * * 2693 * * * 2579 * * * 1800 * * 10 0 * * * * * * 2523 0 0 K 11 * * 3013 * * * 2848 * 1985 * * 2408 * * 3101 2477 * * * * 11 0 * * * * * * 2950 0 0 F 12 * * * * 1424 * * * * * * * * * * * 2757 * * 1060 12 0 * * * * * * 3217 0 0 P 13 * * * * * 2924 * * * * * * 430 * * 2987 * * * * 13 137 3464 * 0 * * * 3425 1000 0 N 14 * * * 2104 * * * * 2421 * * 3528 2924 * * 1465 * * * * 14 0 * * * * * * 3425 0 0 Y 15 2782 * * 2999 1547 * * * * * * * * * * * * * * 1369 15 127 * 3566 * * * * 3425 0 0 I 16 * * * 2908 2889 * 2212 1416 * * * 2825 * * * * * * * * 16 0 * * * * 0 * 3382 0 1000 P 17 3631 3465 * 3922 * * * * 2465 * * * 782 * * * * * * * 17 0 * * * * * * 3666 0 0 P 18 * * * 2933 * 3665 * * 3978 3765 * * 1427 * * 3571 2343 * * * 18 0 * * * * * * 3666 0 0 K 19 2765 * * 2608 * * 3838 * 3228 * 3242 * * * 2426 * 3234 3131 * * 19 105 3838 * 0 * * * 3838 1000 0 D 20 4789 * 2412 2486 * * * * 2699 3362 3757 * * * 4042 4434 4089 3232 * * 20 53 4785 * 1000 1000 * * 3852 1000 0 P 21 2893 * 1981 1512 * * * * * * * 4157 2562 4789 * * * * * * 21 0 * * * * * * 3852 0 0 A 22 3638 * 2231 1338 * 4678 * * 4919 3709 * * * 3705 * 3541 * * * * 22 57 * 4694 * * * * 4068 0 0 E 23 5196 * 2195 632 * 3678 * * 5023 * * * * * * * * * * * 23 63 4545 * 0 * 0 * 4073 1000 1000 R 24 3794 * 1642 1097 * * * * 3730 * * * * * 3949 * * * * * 24 113 * 3730 * * * * 4096 0 0 L 25 3679 * 5006 * * * 5042 5623 * 1387 4611 * 2497 * * * 4291 2710 * 4805 25 0 * * * * * 0 4088 0 1000 V 26 * * * * * * * 4817 4929 * 5238 * * 4652 * 5416 * 248 * * 26 0 * * * * 0 * 4084 0 1000 D 27 * * 42 * * * * * * 5113 * * * * * * * * * * 27 0 * * * * * * 4460 0 0 P 28 4736 * * * * * 5383 3745 * * * * 529 3208 * 5704 * 4530 * * 28 0 * * * * * * 4467 0 0 R 29 4479 * * * * * * 6058 1598 1500 4041 * * 3729 3453 * 5119 * * * 29 0 * * * * * * 4467 0 0 Q 30 4471 * 2124 2233 * * * 3745 3122 4081 * 5988 3853 5377 5546 * 3611 4265 * * 30 0 * * * * * * 4467 0 0 K 31 3501 * 4176 3169 5254 5427 4553 * 2543 3880 * 4584 * 4000 * 5793 3053 3796 * 3337 31 0 * * * * * * 4467 0 0 L 32 * * * * 3744 * * 2977 * 696 3779 * * * * * * 3555 * 5438 32 0 * * * * * * 4511 0 0 E 33 * * * 1967 * * * 4889 2960 3668 * * * 5132 1309 * 3814 * * * 33 0 * * * * * * 4511 0 0 P 34 3967 * 4369 943 * * 5889 * 2748 * * * 3518 3329 * * * 6046 * * 34 0 * * * * * * 4511 0 0 G 35 4428 * * 1833 * 4333 4423 * 2337 * * 5789 5689 5052 3359 2859 5689 5458 * 4889 35 0 * * * * * * 4511 0 0 C 36 5028 45 * * * * * * * * * * * * * * * * * * 36 434 1945 * 1000 1000 * * 4511 2899 0 T 37 1799 * * 5247 * 5578 * 3811 2384 3467 * * * 4226 3358 3527 3747 * * * 37 157 3274 * 848 1171 * * 4511 2140 0 A 38 2175 * 5438 3184 * 4872 * * 3336 * * * 1557 6172 * 3959 5312 3853 * * 38 139 3444 * 611 1535 * * 4511 2057 0 R 39 4785 * 4608 2857 * 5150 1851 * 2261 * * 4089 * 2502 5581 * * 6109 * * 39 77 4267 * 0 * * * 4515 1660 0 C 40 4630 262 * * * 5309 * 5232 * * * * * * * * 4284 5457 * * 40 0 * * * * * * 4660 0 0 S 41 2639 * * 4237 * 4284 5476 5819 2943 4987 * 5223 5508 5512 * 2699 3323 2260 * * 41 0 * * * * * * 4660 0 0 L 42 3089 * 5476 3020 * * 2744 * 2044 5600 * 5740 2812 5284 4513 4047 * * 4907 * 42 0 * * * * * * 4660 0 0 W 43 3787 * * 5549 3225 * * * 4251 2928 5745 * 3308 4782 5512 4237 4981 5715 2415 2774 43 37 5309 * 1000 1000 * * 4660 1120 0 V 44 * * 4364 4987 4049 5892 * * 1823 2425 5774 5624 * 5745 3602 * 5714 2919 4248 5046 44 0 * * * * * * 4660 0 0 N 45 4004 * 3551 2406 * 5280 2676 5866 2898 3796 * 3496 * 4987 6197 4318 4369 * * 5283 45 0 * * * * * * 4660 0 0 E 46 3069 * 6268 2237 * * 2676 4151 1781 4181 * * * * 3726 * * 5549 * * 46 49 4898 * 0 * * * 4660 1000 0 Y 47 * * * * 3034 * * * * 1436 * * * * * * * * 4951 1071 47 0 * * * * * * 4598 0 0 D 48 5864 * 1848 1894 * 5529 5215 * 4941 * 5150 3007 * 2573 * 6083 5679 * * * 48 0 * * * * * * 4598 0 0 A 49 1846 * 5733 1339 * 5247 * * 4566 6124 * 5064 * 4777 3498 * 4652 5052 * * 49 0 * * * * * * 4598 0 0 C 50 * 47 * * * * * * * * * * * * * * * 4951 * * 50 0 * * * * * * 4598 0 0 T 51 5078 * 6124 2932 * 5207 * 4547 * 3674 * 2325 * * * 4469 3243 1765 * 4951 51 0 * * * * * * 4598 0 0 K 52 2971 * 2161 1865 * 4026 * * 2712 * * 4390 * 5414 * 4881 4178 * * * 52 0 * * * * * * 4598 0 0 R 53 4866 * * * * * * * 4205 * * * * * 134 * * * * * 53 40 * 5207 * * * * 4598 0 0 V 54 * * * * 4845 * * 2844 * 4180 * * * * * * 5948 406 * * 54 68 4449 * 0 * * 0 4583 1542 1000 R 55 * * * 3604 * 4267 6312 * 2287 4845 * 2057 * 5258 3361 3856 2469 * * * 55 142 3419 * 2371 310 * 0 4583 2199 1000 A 56 2892 * * 6175 * 3470 * * 2986 4246 5396 * * * 5271 1137 5307 4246 * * 56 154 3639 5575 1779 497 0 * 4583 1878 1000 R 57 * * 2966 3780 * 6179 5523 * 2082 * * 3292 * 4263 1644 * * 4225 * * 57 70 5687 5177 1585 585 * 0 4592 1000 1000 T 58 2599 * 4623 3790 * 4368 4994 4923 4715 4940 * 5641 5116 4248 * 1574 3305 * * * 58 50 5496 6368 1585 585 1000 1000 4547 1000 1486 D 59 5510 * 1842 2692 5912 * 4622 * 3030 5615 * 4181 3848 4058 5178 3389 4774 * * * 59 83 4155 * 2966 198 0 * 4563 1668 1620 N 60 * * * 2811 * 2399 5136 * 5702 * * 4380 3012 * * * 1283 * * 4748 60 39 5215 * 3000 193 * * 4598 1165 0 K 61 4337 * * 2014 * 5957 3628 * 1720 6042 * * * 4005 3945 3945 3884 5200 * * 61 0 * * * * * * 4598 0 0 G 62 5105 * * 646 * 2767 * * 2936 * 4205 * * * * * * * * * 62 76 4289 * 0 * * * 4598 1143 0 N 63 5227 * 2059 5705 * * 2417 * * * * 2476 * * * 2873 2247 * * * 63 0 * * * * * * 4608 0 0 C 64 * 0 * * * * * * * * * * * * * * * * * * 64 0 * * * * * * 4608 0 0 S 65 4889 * 5227 4684 * * 3618 3810 5451 3552 2962 * * 4662 * 4725 2376 2414 * 4217 65 0 * * * * * * 4608 0 0 G 66 5626 * * 1047 * 1995 5172 * * * * 5264 * 4241 * * * * * 2855 66 0 * * * * * * 4608 0 0 Q 67 * * * 771 * * 5172 * * * * * 3493 1852 * * * * 5626 * 67 0 * * * * * * 4608 0 0 Y 68 * * * * 1803 * 5790 5383 * 1734 3618 * * * * * * * * 1790 68 0 * * * * * * 4608 0 0 E 69 5679 * * 3626 799 * * 5215 * 4022 5383 * * * 3493 5954 * 3877 5552 5790 69 0 * * * * * * 4608 0 0 E 70 5264 * 661 2979 * * 2220 * * * * * * * * * * * * * 70 0 * * * * * * 4608 0 0 L 71 * * * * 2242 * 5169 4090 * 1391 * * * * * * * * 4161 1916 71 0 * * * * * * 4608 0 0 H 72 4249 * * 6111 5767 * 5693 3696 * 1938 6023 * * 3319 * * 4767 1889 3624 4220 72 0 * * * * * * 4608 0 0 V 73 6217 * * 4809 * 5042 894 6018 5666 * 5420 6316 * 3182 * 3592 3493 5693 * 6654 73 0 * * * * * * 4608 0 0 C 74 3163 451 * 4378 * * 4780 * * * * * * * 5758 * * 5552 * 4951 74 0 * * * * * * 4608 0 0 I 75 3412 * * * * * * 1960 * 2575 * * * 3918 3678 5786 * 1649 * * 75 0 * * * * * * 4584 0 0 D 76 * * 421 3464 * * * * * * * 4202 * 5754 4700 * 4294 * * * 76 0 * * * * * * 4584 0 0 R 77 3189 * 3776 4736 * 6139 1307 * 2488 * * 5657 * 4758 4772 5860 5765 4203 * * 77 0 * * * * * * 4584 0 0 C 78 5765 92 * * * * * * * * * 5343 * 5724 * * * * * * 78 28 5724 * 1585 585 * * 4584 1000 0 V 79 2076 * * * * * * 5392 * 4820 5718 * * * * 5212 4022 747 * * 79 0 * * * * * * 4584 0 0 A 80 980 * 3747 * * 5110 * * * * 3445 * 5706 3547 * 3041 4498 5198 * * 80 0 * * * * * * 4572 0 0 K 81 6180 * 5331 5601 * * 3059 * 2371 * * * 762 5757 * 5700 * * * * 81 0 * * * * * * 4565 0 0 D 82 * * 2958 4355 * * * * 1067 * * * * 2850 3976 4294 3443 * * * 82 0 * * * * * * 4565 0 0 I 83 3665 * * * * * * 2307 * 728 5998 * * * * * * 3326 * * 83 0 * * * * * * 4565 0 0 F 84 * * * * 496 * * 3752 * 4822 5176 * * 4729 * * * * 3107 * 84 0 * * * * * * 4565 0 0 K 85 2486 * 3498 5838 * * 3406 * 1955 * * 3982 4143 * 4271 2797 4959 * * 6010 85 0 * * * * * * 4565 0 0 Y 86 3677 * * 4304 * * 3210 * 1868 4476 * 4856 * 3373 5039 4972 3232 3979 * 3625 86 0 * * * * * * 4565 0 0 L 87 * 5285 * * * * * * * 105 5372 * * * * * * 5608 * * 87 0 * * * * * * 4565 0 0 K 88 * * * * * * * * 92 * * * * * 4023 * * * * * 88 0 * * 0 * * * 4306 0 0 //