HHsearch 1.5 NAME c9g30H_ FAM FILE c9g30H_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9g30H_.a3m DATE Sat Apr 26 10:20:29 2025 LENG 119 match states, 119 columns in multiple alignment FILT 113 out of 199 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.4 EVD 0.4242 -0.1670 SEQ >ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEE EEECCCCCHHHHHHHCCCC >ss_conf 9243044000773113356998852357665556823300036569999998720783999973879989999999999767246889897589868999 9987997247778523769 >Consensus xkxxtxxxfxrpxtlxxxxxpkxxrxxxxxxxkmdxyxIIxxPxiTEKsxxxxexxNxyxFxVxxxAnKxeIKxAVExlfxVkVxkVnTxxxxxxxKKAx VxLxxxxxaxdvAxkiGxi >c9g30H_ LKVRTSTTFRLPKTLKLTRSPKYQRKSVPHYNRLDAHKIIVAPIATETAMKKVEDGNTLVFQVDIKSNKHQIKSAVKELYDVDALYVNTLIRPNGTKKAY IRLTSDYDALDIANRIGYI >UniRef50_Q0EW38(2-99:99) 50S ribosomal protein L23 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW38_9PROT E=2e-06 s/c=0.55 id=25% cov=70% ---------------------------------INHFNILRQPVITEKSYTATGAANQYTFRVAREASKAQVKAAIEAIFEVNVDKVQVINMPskpkrrg aqsgsrSGYRKAVVRLA-EGQTLEVAEEV--- >UniRef50_Q0BUP8(3-114:115) 50S ribosomal protein L23 n=156 Tax=Bacteria RepID=RL23_GRABC E=6e-17 s/c=0.79 id=31% cov=82% -----------------QKTSLAARRRAERMSREAMYEVIRSPLITEKAT-LLSERSQVVFRVAIDATKPEIKAAVEGLFGVKVIGVNTLVNKGKTkrfr grpgqrsdvKKAYVQLVAG-QAIDLTAKL--- >UniRef50_Q8EUB5(1-90:138) Ribosomal protein L23 n=1 Tax=Mycoplasma penetrans RepID=Q8EUB5_MYCPE E=1e-07 s/c=0.64 id=30% cov=64% ---------------------------------MDLLSVIIKPLHSEKSYSLRnEDIKKYVFEVNRNANKYEISLAFQLIYGIVPNKVNVVNRKptptrt gtrnpgmtKAKKIAYITLPHGVD----------- >UniRef50_D1JEA7(2-82:82) 50S ribosomal protein L23P n=1 Tax=uncultured archaeon RepID=D1JEA7_9ARCH E=4e-12 s/c=0.90 id=26% cov=69% --------------------------------------VLKHVLPSEKATLMIDAENKLPFVVDLRANRAEIKREVEIVFETPVKSVRTMISSKGKKKAI IEFEDEGKAKEVGTSLGIL >UniRef50_C1DYL9(30-88:160) Ribosomal protein L23 n=2 Tax=Micromonas RepID=C1DYL9_9CHLO E=5e-05 s/c=0.83 id=20% cov=34% ----------------------------------------------------------VTFITRPAVTKVDVKECLEKVYGVGVERVHTVNYEGKKKR-- ------------------- >UniRef50_Q85FW1(4-71:74) 50S ribosomal protein L23 n=1 Tax=Cyanidioschyzon merolae RepID=Q85FW1_CYAME E=6e-07 s/c=0.81 id=26% cov=58% ------------------------------------------PILTDKSTRLME-MRQYTFQVSPKMRKPDLRRYLEQRFQVKVLAV----RKSRPNRMI VRLAESIDLLAYASE---- >UniRef50_Q9TLT4(11-70:101) 50S ribosomal protein L23, chloroplastic n=1 Tax=Cyanidium caldarium RepID=RK23_CYACA E=1e-06 s/c=0.90 id=25% cov=51% -------------------------------------DLILSSVITDKTIKLLETKN-YTFLAPKEVSKIAFKRAIEDMFKVKVNSINSLNLPNKKKR-- ------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 0 * * * * * * * * * * 1 0 * * * * * * 1000 0 0 K 2 * * * * * * * * 111 * * * * 3753 * * * * * * 2 0 * * * * * * 2896 0 0 V 3 3958 * * * * * * 1328 * * 4124 * * * * 3890 3230 1709 * * 3 0 * * * * * * 2923 0 0 R 4 * * * * * * * 4016 * * * * * * 562 * 4237 * 3532 3045 4 0 * * * * * * 3114 0 0 T 5 * * * * * * * * 4107 * * 3194 * * 2857 * 526 * * * 5 0 * * * * * * 3282 0 0 S 6 3494 * * * 3507 * * * 3380 * * 2440 * * 2658 1379 * * * * 6 0 * * * * * * 3282 0 0 T 7 * * * * * * * 3254 * 3494 * * 2507 * * * 1532 1812 * * 7 0 * * * * * * 3282 0 0 T 8 3815 * * * * * 2602 * 2678 3705 * * * 2995 2848 * 1905 * * * 8 0 * * * * * * 3529 0 0 F 9 * * * * 191 * * * * 3705 * * * * * * * 4402 * * 9 0 * * * * * * 3529 0 0 R 10 * * * * 2702 3854 2726 * 2103 * * * * * 2541 * * * 2922 3483 10 0 * * * * * * 3529 0 0 L 11 * * * * * * * * 2102 4498 * * * 2922 910 * 4090 * * * 11 0 * * * * * * 3529 0 0 P 12 4090 * * * * 4678 * * * * * 3854 264 * * * * * * * 12 0 * * * * * * 3529 0 0 K 13 3854 * * * * * 2747 * 890 * * * * * 3041 3705 * 4498 * * 13 0 * * * * * * 3529 0 0 T 14 3934 * * * * * * 3553 * * 3789 * 4149 * * 4125 592 * * * 14 0 * * * * * * 3560 0 0 L 15 * * * 3789 6092 * * * 3553 651 * * * 3934 4432 * * * * 3659 15 0 * * * * * * 3560 0 0 K 16 4237 * * * * * 4458 * 2136 * * 3648 * 4538 2807 3887 4854 3090 2406 * 16 0 * * * * * * 3775 0 0 L 17 * * * * * * 3319 3648 * 1164 * * 3614 * 2741 * 3608 4049 * * 17 0 * * * * * * 3775 0 0 T 18 2864 * * 4693 * * * * 3545 * * 3690 2027 2858 3245 3763 4791 * 4008 * 18 0 * * * * * * 3896 0 0 R 19 3833 * * * * 3763 * * 1454 * * 3690 * * 1274 * * * * * 19 0 * * * * * * 3896 0 0 S 20 3367 * * 4395 * * * 3136 2424 * * 2532 * 3355 2977 3913 3451 * * * 20 0 * * * * * * 3896 0 0 P 21 3800 * * * 4108 * * * * * * * 512 * * 2889 * 4881 * * 21 0 * * * * * * 3896 0 0 K 22 3442 * * * * * * * 916 3137 * 4008 * 3064 3596 * * * * * 22 0 * * * * * * 3896 0 0 Y 23 4121 3884 * * 2878 * 4108 3690 * * * * 2797 * * * 4008 5046 * 1446 23 70 4406 * 1585 585 * * 3896 1000 0 Q 24 4212 * * 3621 * * * * 5083 4085 * 3795 974 4881 * 3892 4507 4321 * * 24 0 * * * * * * 4035 0 0 R 25 * * * 3831 * * 4379 * 3938 * * 3225 4038 4602 955 3451 * * * * 25 0 * * * * * * 4035 0 0 K 26 * * * * * * 5083 2865 1652 * * 2487 * 4507 2197 4719 * 4768 * * 26 88 * 4085 * * * * 4035 0 0 S 27 3441 * * * * * * 4696 * 2622 * 3733 3046 * 2939 1694 * 3811 * * 27 0 * * * * 0 * 3914 0 1000 V 28 3498 * * 4602 * * * 2084 2464 * 4085 * * * * 4944 3062 2047 * * 28 71 4379 * 0 * * * 4035 1000 0 P 29 4944 * * 3122 * * * * 3538 * * 3795 963 * * 3938 3621 4841 * * 29 152 5083 3831 0 * * * 4035 1000 0 H 30 4238 3843 * 4741 * * 3910 2633 2732 * * * * * 1834 4732 3494 4187 * * 30 71 * 4387 * * * 0 3825 0 1000 Y 31 * * * * * 4125 * * 2812 4680 3165 * * 3152 2982 2614 2866 * * 3181 31 0 * * * * 855 1161 3807 0 1511 N 32 4598 * * * * * * 3983 2005 4458 * 2056 2954 * * 2358 4784 * * * 32 0 * * * * * 0 3698 0 1000 R 33 * * 3260 4318 * 4917 * * 941 * * * * 4223 2576 5232 * * 4511 * 33 86 4116 * 0 * * 0 3803 1097 1000 L 34 5793 * 5322 5870 * * 4190 3672 * 1858 1319 3883 * * 4934 * * 5974 6208 * 34 0 * * * * * 0 4351 0 1000 D 35 5923 * 784 4234 4743 * * * 4054 * * 2985 * * 5819 5713 3488 * * * 35 0 * * * * * 0 4391 0 1000 A 36 3161 6293 5921 * 5910 * 2583 3589 3427 3370 5038 * 2364 * 6151 3612 5368 6009 * 4561 36 0 * * * * * 0 4438 0 1000 H 37 * 5922 5201 * 2267 * 3365 5435 * 5882 * 5121 * 4866 6412 5247 5097 * * 1056 37 19 6245 * 4585 61 * 0 4513 1000 1000 K 38 4628 * 1835 4066 * 4878 * * 2992 * * 3486 6564 2890 3905 2936 6757 5762 * * 38 0 * * * * * 0 4673 0 1000 I 39 * * * * * * * 1098 5956 3174 * * * 4659 * * 6704 1487 * * 39 39 * 5220 * * 0 * 4744 0 1000 I 40 * * * * 5433 * * 812 * 1614 * * * * * * * 3635 * * 40 0 * * * * * 0 4746 0 1000 V 41 5765 5198 5577 5255 * * 5992 2765 1461 3121 6793 * * 4821 2656 * * 3984 * * 41 0 * * * * * 0 4746 0 1000 A 42 3867 6534 * 6423 4168 4472 3465 * 2496 6111 6366 * * 5824 2977 2922 5110 * * 2263 42 0 * * * * 0 * 4746 0 1000 P 43 4496 * * * * 5565 * * * * * * 272 6412 * 4485 * 4323 * * 43 20 6172 * 1000 1000 * * 4811 1000 0 I 44 * * * * * * 3821 2082 * 1863 4682 5296 5247 5587 4414 * * 2393 5636 4347 44 0 * * * * * * 4811 0 0 A 45 4707 * 5341 * 5480 * 6055 1930 5740 2506 * * 6234 5410 6552 * 2479 2214 * * 45 10 7208 * 0 * * * 4832 1000 0 T 46 * * * * * * * * * * * 3806 * * * 2165 503 * * * 46 0 * * * * * * 4833 0 0 E 47 * * 3713 311 6075 * * * 5131 5312 * * 6194 * * 6549 * * 5343 * 47 0 * * * * * * 4833 0 0 T 48 8581 * * 5957 * * * * 301 6826 * * * 5312 5666 3943 5909 5343 6667 * 48 28 6911 6549 1000 1000 * * 4833 1000 0 A 49 1419 * 6616 * * 5077 * 6232 * 7099 4832 5467 * 6289 * 1691 2699 5002 * * 49 0 * * * * 0 * 4838 0 1000 M 50 4744 * 6706 5947 4597 * * 4671 * 3872 2114 3871 * 5343 * 3582 2081 3779 * 3810 50 52 7069 5148 0 * * * 4833 1000 0 K 51 4501 * 4706 4784 5099 4384 6420 4562 2076 3828 4744 3406 * 4233 3181 4273 4697 4547 6115 * 51 8 * 7424 * * 0 * 4842 0 1973 K 52 3468 6553 5237 4357 * 6738 6634 4208 3076 1625 3348 4700 * 3306 6429 4856 * 5414 * * 52 16 6525 * 3322 152 0 * 4838 1000 1000 V 53 3900 * * * * 4363 6757 2467 4429 2732 2816 6039 * 4608 3167 4752 3270 4412 * * 53 115 4158 5580 156 3290 * * 4833 2264 0 E 54 5737 * 3147 710 6494 5075 * * 4795 * * * * 5259 * 3410 6425 4688 * 6690 54 38 * 5269 * * 0 * 4800 0 1000 D 55 4729 * 2986 2472 4748 5996 * 6641 2187 6081 * 4023 * 3358 4213 3538 4264 7052 * * 55 90 * 4053 * * 0 * 4832 0 1842 G 56 5000 * 4608 3310 4089 4051 3901 4148 4378 4579 4402 1786 * 4635 6143 4200 5179 * * 5584 56 172 * 3157 * * 0 * 4824 0 2359 N 57 * * 4337 5318 * 3468 * * 3783 * * 583 * * 4391 4400 * * * * 57 64 6774 4856 2000 415 0 * 4810 1000 3145 T 58 7257 6264 * 6885 * * * 6011 1814 * 6172 * * 2036 4319 6534 1967 3355 * * 58 37 5289 * 3170 170 0 * 4889 1000 2245 L 59 * * * * 5014 * * 3118 * 2018 5677 * * * * 5263 * 3354 * 1109 59 0 * * * * * * 4870 0 0 V 60 3052 6535 * 5820 7165 6310 6810 5418 * 7058 6100 * 6420 4416 * 4702 1678 1482 * 6713 60 0 * * * * * * 4909 0 0 F 61 * * * * 127 * * 5478 * 5366 * * * * * * * 5150 * 6753 61 0 * * * * * * 4909 0 0 Q 62 6066 * 4252 2903 6978 * 6798 2162 2860 3607 5683 5315 * 4394 4170 * 5392 3479 6699 3879 62 0 * * * * * * 4909 0 0 V 63 4909 4789 * * * * * 5433 * * * * * * * * 5070 188 * * 63 0 * * * * * * 4885 0 0 D 64 3103 * 1421 4212 5426 6823 4389 * 5454 5800 * 3534 4677 6182 4319 3277 5292 5831 * * 64 0 * * * * * * 4885 0 0 I 65 4021 * * 6173 * 6252 6785 3859 2527 3654 6251 4667 2440 6806 2715 4666 4910 3186 * * 65 0 * * * * * * 4885 0 0 K 66 5132 6724 2222 4853 6134 4272 5027 * 2334 7049 6209 3597 * 4825 2634 4089 4857 * 7131 5831 66 0 * * * * * * 4885 0 0 S 67 638 5990 * * 6463 * * * * 3910 5036 6209 * * * 4141 4938 3045 * 6740 67 0 * * * * * * 4885 0 0 N 68 * * 4477 * * * 6293 6146 6914 * * 1078 6947 * 6381 3278 1630 * * * 68 0 * * * * * * 4885 0 0 K 69 * * * * * * * * 64 * * * * * 4534 * * * * * 69 0 * * * * * * 4885 0 0 H 70 4749 * 4740 4367 7245 6216 3909 3091 4180 3861 * 5522 2984 4420 3784 4315 2802 4186 * 4922 70 0 * * * * * * 4885 0 0 Q 71 6380 * 2877 1519 * 6440 * * 5459 5399 6005 6521 * 1676 5714 4785 6252 6098 6134 6923 71 0 * * * * * * 4885 0 0 I 72 * * * * 5440 * * 485 * 4779 4530 * * * * * 5947 2587 * * 72 0 * * * * * * 4885 0 0 K 73 3918 * * 4935 * 6209 * * 570 * 6296 * * * 2479 5518 * * * * 73 0 * * * * * * 4885 0 0 S 74 2973 * 3826 2762 * * 5113 * 1966 4538 * 3964 * 3571 3328 4852 5806 6216 * 6255 74 0 * * * * * * 4885 0 0 A 75 415 6411 * 4315 5795 * * 4795 * 4747 * 6521 * * * 5599 7357 * 5452 4776 75 0 * * * * * * 4885 0 0 V 76 * * * * 2887 6251 * 1886 * 3956 5406 * * * * * * 1020 * * 76 0 * * * * * * 4885 0 0 K 77 6881 5831 * 658 * * 6961 5503 2947 * * 5140 * 3974 6019 4421 5248 * * * 77 0 * * * * * * 4885 0 0 E 78 4079 * 4594 3052 6153 5247 5186 5189 2338 4091 5290 5101 * 3532 4399 3031 3857 5559 * 5266 78 26 5834 * 1585 585 * * 4885 1000 0 L 79 3969 6134 * * 4954 * * 2373 5498 1269 4659 * * 5661 4228 * 5949 3067 * 6480 79 0 * * * * * * 4885 0 0 Y 80 * 4839 * * 719 * * * * 5027 * * * * * 6663 * * 6657 1704 80 32 5514 * 746 1309 * * 4885 1935 0 D 81 * * 2104 3336 * 2075 * * 2660 * * 2474 * 4616 * 4263 * * * * 81 13 6823 * 0 * * * 4885 1000 0 V 82 * * * 5101 * * * 2883 5095 4481 5795 * * 6216 * 6961 5330 521 * * 82 0 * * * * * * 4885 0 0 D 83 4839 * 3917 4697 * 5804 5698 * 1005 * * 4169 4534 4967 5274 4153 3291 6631 * * 83 0 * * * * * * 4885 0 0 A 84 5280 4719 * * * * * 3960 * * 5834 * 3435 * * * 4939 455 * * 84 0 * * * * * * 4885 0 0 L 85 2942 * 4498 2742 * 6558 * 3291 3127 2926 * 4714 * 5120 5807 4918 3751 3114 * 6677 85 0 * * * * * * 4885 0 0 Y 86 3921 * 3167 6730 * 4598 * * 1396 * * 3999 * * 3207 2369 6841 6558 * 6922 86 0 * * * * * * 4885 0 0 V 87 * 5478 * * * * * 2685 * * * * * * * * 5675 317 * * 87 34 6487 6370 3700 115 * * 4885 1000 0 N 88 5976 5175 * * * * 4574 * 5643 * * 669 * 5740 2512 5216 4489 * * * 88 22 6047 * 591 1573 * 0 4865 1636 1000 T 89 6462 * * * * * * 3451 * 5512 5997 * * * * 3426 623 3089 * * 89 17 6422 * 3807 107 * 0 4865 1000 1000 L 90 4240 5827 * * 5333 * 4463 3454 6899 1479 3518 6422 * 3538 6029 4158 5498 3309 * 5533 90 17 * 6387 * * * 0 4865 0 1000 I 91 * * * * * 6378 5803 1720 * 5780 4829 1261 * * 4273 * 4158 3503 * * 91 100 3899 * 3895 100 0 * 4711 2223 1557 R 92 6495 6041 * * 5448 6262 * 5784 3547 3919 4954 4747 6707 5322 1904 4413 2497 3291 * 3828 92 29 5653 * 3798 108 * * 4904 1464 0 P 93 5579 * 5807 4544 5192 * 6782 5149 2674 4342 3870 5258 1555 6277 4387 3854 4364 5789 * 5937 93 54 4766 * 3768 110 * * 4684 1930 0 N 94 5499 * 3892 6262 * 1454 6721 * 3025 5777 * 2786 6038 * 3615 4025 4420 5937 * 6001 94 60 4628 * 3818 106 * * 4684 1894 0 G 95 4381 * 4550 * 6021 1574 6466 * 1245 * * 5865 * 6404 3935 5033 * * * * 95 225 3228 4719 3607 124 * * 4683 2676 0 T 96 5344 * 4972 3540 4765 5358 * * 1982 3878 5818 4928 5833 5026 5248 6543 3977 4413 3003 3262 96 153 3316 * 3703 115 0 * 4651 2601 1850 K 97 * * * * * * * * 146 * * 4635 * * 4579 6154 * * * * 97 16 6534 * 3700 115 * * 4683 1000 0 K 98 * * * * * * 6290 5947 554 6161 * 6067 * 6086 2204 5750 * 6558 * * 98 0 * * * * * * 4661 0 0 A 99 400 * * * * * * 5841 * 5742 3011 * * 6444 4727 * * 4933 * * 99 0 * * * * * * 4811 0 0 Y 100 * * * 6125 2422 6375 * 2145 * 5677 6012 * * * * 6041 4338 5290 5770 1261 100 0 * * * * * * 4697 0 0 I 101 * 5457 * * * * * 2006 * * * 5515 * * * * 4497 595 * * 101 0 * * * * * * 4717 0 0 R 102 * 5223 6268 5010 * * 5265 5519 2352 * * * * 4348 1701 3444 2454 6720 5048 6069 102 0 * * * * * * 4658 0 0 L 103 * * * * 3612 * * 4461 * 283 * * * * * * 5377 5205 * * 103 0 * * * * * * 4662 0 0 T 104 1764 * 4039 3816 * 3956 4343 6034 3235 * 5575 * 4088 * * 2580 4033 5039 * * 104 75 * 4306 * * * * 4577 0 0 S 105 2434 * 3670 2835 * 6090 5551 * 2743 * * 4489 1870 * 5356 3869 * * * * 105 0 * * * * 0 * 4534 0 1883 D 106 5034 * 1602 2723 * 1947 * * * * * 3324 4609 * 5785 4421 5403 * * * 106 34 * 5405 * * * * 4556 0 0 Y 107 * * 3335 5298 5992 2928 3146 5407 5565 * * 4362 * 3125 * 3820 * 3264 * 2104 107 35 * 5387 * * 0 * 4567 0 1322 D 108 3919 * 1305 2226 * * * * 3042 * * 4093 5872 3799 6449 6601 5340 * * * 108 86 * 4103 * * 0 * 4407 0 1000 A 109 469 * * * * * * 4990 * 4712 * * 4658 5290 5498 4243 3882 * * * 109 0 * * * * 0 * 4222 0 1704 L 110 * * * 3285 * * * 1834 4177 1428 4551 * * 4420 5071 4196 * 5937 * * 110 0 * * * * * * 4254 0 0 D 111 4833 * 808 1851 * * * 5224 * * * 4497 * 5682 * * * * * 5253 111 0 * * * * * * 4254 0 0 I 112 5054 * * * 5324 * * 2121 * 2219 * * * * * * 5195 1197 * 4766 112 0 * * * * * * 4186 0 0 A 113 365 * * * * 4115 * * * 4112 * * * * * 5505 3541 * * * 113 0 * * * * * * 4153 0 0 N 114 4071 * 5370 4849 * 5133 * * * 4917 4945 1715 * * * 1707 2762 5098 * * 114 0 * * * * * * 4128 0 0 R 115 * * * 2848 * 4887 * * 1183 * * 5154 * 4206 2081 3876 * * * * 115 0 * * * * * * 4109 0 0 I 116 * * * 4805 * * * 929 * 1764 4575 * * * * * * 3285 * * 116 0 * * * * * * 3970 0 0 G 117 * * * * * 133 * * 4410 * * * * * * * * * 4613 * 117 0 * * * * * * 3755 0 0 Y 118 * * * * 3354 * * 1854 * 2248 3406 * * * * * 4832 2245 * 3742 118 0 * * * * * * 3646 0 0 I 119 * * * * * * * 1080 * 1549 4089 * * * * * * 2986 * * 119 0 * * 0 * * * 3403 0 0 //