HHsearch 1.5 NAME c9g1zH_ FAM FILE c9g1zH_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9g1zH_.a3m DATE Sat Apr 26 10:40:25 2025 LENG 121 match states, 121 columns in multiple alignment FILT 116 out of 199 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.4 EVD 0.4201 -0.5025 SEQ >ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEE EEEEECCCCCHHHHHHHCCCC >ss_conf 9436851440007820143569988523576655568233000365699999987207839999738799899999999997672468898975898689 999987997247778523759 >Consensus xxxkxrtxxxFxxpktxxxxxxpkxxxxxxxxxxxmdxyxIIxxPiiTEKsxxxxexxNxyxFxVxxxAnKxeIKxAVExlFxVkVxkVNTlxxxxkxKK AxVxLxxxxxAxdvAxkiGxi >c9g1zH_ KALKVRTSTTFRLPKTLKLTRSPKYQRKSVPHYNRLDAHKIIVAPIATETAMKKVEDGNTLVFQVDIKSNKHQIKSAVKELYDVDALYVNTLIRPNGTKK AYIRLTSDYDALDIANRIGYI >UniRef50_D1JEA7(2-82:82) 50S ribosomal protein L23P n=1 Tax=uncultured archaeon RepID=D1JEA7_9ARCH E=5e-10 s/c=0.81 id=26% cov=68% ----------------------------------------VLKHVLPSEKATLMIDAENKLPFVVDLRANRAEIKREVEIVFETPVKSVRTMISSKGKKK AIIEFEDEGKAKEVGTSLGIL >UniRef50_Q0BUP8(3-114:115) 50S ribosomal protein L23 n=156 Tax=Bacteria RepID=RL23_GRABC E=2e-16 s/c=0.77 id=31% cov=81% -------------------QKTSLAARRRAERMSREAMYEVIRSPLITEKAT-LLSERSQVVFRVAIDATKPEIKAAVEGLFGVKVIGVNTLVNKGKTkr frgrpgqrsdvKKAYVQLVAG-QAIDLTAKL--- >UniRef50_Q9TLT4(11-70:101) 50S ribosomal protein L23, chloroplastic n=1 Tax=Cyanidium caldarium RepID=RK23_CYACA E=3e-05 s/c=0.82 id=25% cov=50% ---------------------------------------DLILSSVITDKTIKLLETKN-YTFLAPKEVSKIAFKRAIEDMFKVKVNSINSLNLPNKKKR --------------------- >UniRef50_Q8EUB5(1-90:138) Ribosomal protein L23 n=1 Tax=Mycoplasma penetrans RepID=Q8EUB5_MYCPE E=9e-08 s/c=0.64 id=30% cov=63% -----------------------------------MDLLSVIIKPLHSEKSYSLRnEDIKKYVFEVNRNANKYEISLAFQLIYGIVPNKVNVVNRKptpt rtgtrnpgmtKAKKIAYITLPHGVD----------- >UniRef50_Q85FW1(4-71:74) 50S ribosomal protein L23 n=1 Tax=Cyanidioschyzon merolae RepID=Q85FW1_CYAME E=9e-07 s/c=0.81 id=26% cov=57% --------------------------------------------PILTDKSTRLME-MRQYTFQVSPKMRKPDLRRYLEQRFQVKVLAV----RKSRPNR MIVRLAESIDLLAYASE---- >UniRef50_C1DYL9(30-88:160) Ribosomal protein L23 n=2 Tax=Micromonas RepID=C1DYL9_9CHLO E=8e-05 s/c=0.82 id=20% cov=34% ------------------------------------------------------------VTFITRPAVTKVDVKECLEKVYGVGVERVHTVNYEGKKKR --------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * 1828 * * * * 926 * * * * * 2381 * * * * * 1 0 * * * * * * 3139 0 0 A 2 1275 * * * * 3380 * * * * * * * * * * 2335 1774 * * 2 0 * * * * * * 3139 0 0 L 3 * * * * * * 3089 3077 1663 3448 * * * * 2870 * 2907 * * 3529 3 0 * * * * * * 2893 0 0 K 4 * * * * * * * * 149 * * * * * 3349 * * * * * 4 0 * * * * * * 2987 0 0 V 5 2608 * * * * * * 1576 * * 3693 * * * * 3783 3271 2017 * * 5 0 * * * * * * 2987 0 0 R 6 * * * * * * * * * * * * * * 489 * 3805 * 3491 2977 6 0 * * * * * * 3156 0 0 T 7 * * * * * * * * 4062 * * 3258 * * 2880 * 515 * * * 7 108 3792 * 1000 1000 * * 3368 1000 0 S 8 3497 * * * 3574 * * * 3392 * * 2462 * 3792 2672 1637 * * * * 8 0 * * * * * * 3368 0 0 T 9 * * * * * * * 3357 * 3497 * 3792 2513 * * * 1552 2150 * * 9 0 * * * * * * 3368 0 0 T 10 3582 * * * * * 2911 * 2609 3556 * * * 2846 2699 * 2050 * * * 10 0 * * * * * * 3543 0 0 F 11 * * * * 128 * * * * 3556 * * * * * * * * * * 11 0 * * * * * * 3543 0 0 R 12 * * * * 2557 3709 2550 * 2029 * * * * * 2806 * * * 2754 4423 12 0 * * * * * * 3543 0 0 L 13 * * * * * * * * 2006 4306 * * * 2754 1042 * 3908 * * * 13 0 * * * * * * 3543 0 0 P 14 3908 * * * * 4510 * * * * * 3709 299 * * * * * * * 14 0 * * * * * * 3543 0 0 K 15 3709 * * * * * 2621 * 754 * * * * * 3594 3556 * * * * 15 0 * * * * * * 3543 0 0 T 16 3709 * * * * * * 3516 * * 3556 * 3908 * * 3950 690 * * * 16 0 * * * * * * 3543 0 0 L 17 * * * 3556 5708 * * * 3516 777 * * * 3709 4156 * * * * 3435 17 0 * * * * * * 3543 0 0 K 18 4038 * * * * * * * 2551 * * 3571 * 4319 2592 3650 4652 2895 2220 * 18 0 * * * * * * 3745 0 0 L 19 * * * * * * 3943 3571 * 1102 * * 3374 * 2564 * 4319 3849 * * 19 0 * * * * * * 3745 0 0 T 20 3086 * * * * * * * 3338 * * 3649 1839 2678 3929 3602 4464 * 3746 * 20 0 * * * * * * 3882 0 0 R 21 3622 * * * * 3602 * * 1261 * * 3649 * * 1559 * * * * * 21 0 * * * * * * 3882 0 0 S 22 3162 * * * * * * 3028 2562 * * 2340 * 3746 2818 3636 3294 * * * 22 0 * * * * * * 3882 0 0 P 23 4544 * * * 3929 * * * * * * * 494 * * 2803 * 4705 * * 23 0 * * * * * * 3882 0 0 K 24 4072 * * * * * * * 864 2958 * 3746 * 2900 4209 * * * * * 24 0 * * * * * * 3882 0 0 Y 25 3975 3689 * * 3139 * 3929 3649 * * * * 2612 * * * 3746 4831 * 1614 25 80 4209 * 1585 585 * * 3882 1000 0 Q 26 4149 * * 3334 * * * * 4933 3756 * 3708 1214 4621 * 3728 4325 3962 * * 26 0 * * * * * * 3865 0 0 R 27 * * * 3764 * * 4102 * 3822 * * 3101 3921 4384 1128 3191 * * * * 27 0 * * * * * * 3865 0 0 K 28 * * * * * * 4933 2764 1830 * * 2313 * 4325 2035 4519 * * * * 28 111 * 3756 * * * * 3865 0 0 S 29 3247 * * * * * * 4489 * 2405 * 3674 2880 * 2782 2192 * 3594 * * 29 0 * * * * 0 * 3801 0 1000 V 30 4149 * * 4384 * * * 1887 2343 * 3756 * * * * 4818 3580 2088 * * 30 138 3458 * 0 * * * 3865 1528 0 P 31 3874 * * 3031 * * * * 3325 * * 3708 1110 * * 3822 4085 4644 * * 31 110 * 3764 * * * * 3865 0 0 H 32 3988 3630 * 4503 * * 3636 2532 2952 * * * * * 1891 * 3328 4051 * * 32 81 * 4189 * * * 0 3761 0 1000 Y 33 * * * * * 3907 * * 3051 4404 2848 * * 2971 3428 2749 3034 * * 2886 33 0 * * * * 855 1161 3735 0 1511 N 34 * * * * * * * 3830 1717 4175 * 2153 3221 * * 2373 4475 * * * 34 0 * * * * * 0 3804 0 1000 R 35 * * 3055 4150 * 4736 * * 1161 * * * * 4010 2346 4967 * * 4387 * 35 98 3927 * 0 * * 0 3764 1080 1000 L 36 * * 5243 5616 * * 5416 3529 * 1776 1283 3823 * * 4869 * * 5704 5971 * 36 0 * * * * * 0 4296 0 1000 D 37 5869 * 845 4579 4691 * * * 3912 * * 2832 * * 5692 5540 3351 * * * 37 0 * * * * * 0 4355 0 1000 A 38 3176 6149 5755 * 5812 * 3069 3519 3297 3174 4911 * 2263 * * 3525 5144 5939 * 4409 38 0 * * * * * 0 4397 0 1000 H 39 * 5993 * * 2275 * 3306 5422 * 5975 * 5022 * 4959 6420 5851 5167 * * 950 39 0 * * * * * 0 4442 0 1000 K 40 5476 * 1652 3900 * 4874 * * 3019 * * 3538 6647 3022 4137 2933 6785 5736 * * 40 0 * * * * * 0 4641 0 1000 I 41 * * * * * * * 1165 6067 3036 * * * 4613 * * 6699 1447 * * 41 38 * 5266 * * 0 * 4706 0 1000 I 42 * * * * 5450 * * 704 * 1730 * * * * * * * 4014 * * 42 0 * * * * * 0 4703 0 1000 V 43 5785 5184 5557 5657 * * 5959 2785 1378 3158 6838 * * 5176 2752 * * 3823 * * 43 0 * * * * * 0 4703 0 1000 A 44 3740 6614 * 6467 4645 4028 3926 * 2406 5975 6395 * * 5869 3180 2792 5131 * * 2187 44 0 * * * * 0 * 4703 0 1000 P 45 4531 * * * * 5581 * * * * * * 241 6360 * 5118 * 4361 * * 45 21 6122 * 1000 1000 * * 4771 1000 0 I 46 * * * * * * 3871 2028 * 1943 4738 5366 5306 5651 4494 * * 2239 5673 4516 46 0 * * * * * * 4775 0 0 A 47 5009 * 5420 * 5111 * 6137 1958 5820 2351 * * 6243 4909 6584 * 2631 2231 * * 47 10 7247 * 0 * * * 4798 1000 0 T 48 * * * * * * * * * * * 3770 * * * 2194 498 * * * 48 0 * * * * * * 4797 0 0 E 49 * * 3577 314 6127 * * * 6043 5389 * * 6201 * * 6675 6405 * 5421 * 49 0 * * * * * * 4797 0 0 T 50 8583 * * 5216 * * * * 271 6850 * * * 5389 5714 4451 6572 5421 6586 * 50 27 6860 6675 1000 1000 * * 4797 1000 0 A 51 1551 * 6645 * * 5061 * 6369 6350 6129 4664 5619 * 6544 * 1626 2683 5062 * * 51 0 * * * * 0 * 4802 0 1000 M 52 4800 * 5943 5991 5294 * * 4692 * 3660 2268 3782 * 4962 * 3470 2062 3800 * 3738 52 53 7145 5105 0 * * * 4797 1000 0 K 53 5003 * 4623 4532 5177 4212 6411 4352 2161 3572 4858 3598 * 4344 2934 4274 4752 4888 6021 * 53 0 * * * * 0 * 4798 0 2115 K 54 3186 6569 5808 4205 * 7253 6555 4007 3216 1569 3282 5394 * 3519 6430 4829 * 5445 * * 54 26 6483 7253 3322 152 * * 4797 1000 0 V 55 3920 * * * * 4112 * 2507 4470 2481 2862 6004 * 4726 2999 5093 3581 4409 * * 55 93 4581 5601 215 2853 0 * 4801 1919 1000 E 56 5452 * 2916 717 6618 4796 * * 6035 6388 * * * 5790 * 3509 6418 4786 * 6771 56 36 * 5339 * * 0 * 4764 0 1000 D 57 4745 * 3289 2507 4986 6025 * 6687 2106 6133 * 3966 * 3201 4269 3459 4261 6203 * * 57 122 * 3627 * * 0 * 4800 0 1799 G 58 5019 6820 4542 3333 3753 4500 4020 4338 4111 4441 4401 1936 * 4389 6172 4208 5247 * * 4873 58 163 6471 3385 0 * 0 * 4726 1000 2830 N 59 * * 4356 5331 * 3483 * * 3663 * * 582 * * 4471 4477 * * * * 59 50 6879 5308 2000 415 0 * 4844 1000 2860 T 60 * 6535 * 5688 * * * 6070 1776 * 6042 * * 2107 4029 6506 2093 3198 * * 60 35 5375 * 3170 170 0 * 4850 1000 1872 L 61 * * * * 5336 * * 2994 * 2133 5730 * * 6851 * 5429 * 3552 * 1042 61 0 * * * * * * 4865 0 0 V 62 3129 6626 * 5857 7205 5830 6566 5055 * 7112 6138 * 6254 4625 * 4264 1661 1552 * 6820 62 0 * * * * * * 4916 0 0 F 63 * * * * 139 * * 4967 * 5425 * * * * * * * 5189 * 6718 63 0 * * * * * * 4916 0 0 Q 64 5451 * 4400 2993 6288 * 6882 2171 2846 3347 6613 5332 * 4351 4409 * 5406 3394 6728 3963 64 0 * * * * * * 4916 0 0 V 65 4982 5097 * * * * * 5563 * * * * * * * * 5133 169 * * 65 0 * * * * * * 4860 0 0 D 66 3131 * 1377 4014 5978 * 4606 * 5449 5911 * 3592 4381 5529 4317 3338 5396 5873 * * 66 0 * * * * * * 4860 0 0 I 67 4385 * * 6192 * 6276 6883 3970 2554 3848 6237 4729 2546 6843 2456 4675 4580 3169 6908 * 67 0 * * * * * * 4860 0 0 K 68 4821 6570 2482 4476 6116 4586 5181 * 2250 7088 6148 3223 * 4802 2641 4181 4921 * 7265 5873 68 0 * * * * * * 4860 0 0 S 69 612 6028 * * 6481 * * * * 3982 5025 6148 * * * 4318 5298 3111 * 5656 69 0 * * * * * * 4860 0 0 N 70 * * 4487 * * * 7021 6092 6651 * * 1132 6983 * 6371 3326 1526 * * * 70 0 * * * * * * 4860 0 0 K 71 * * * * * * * * 62 * * * * * 4581 * * * * * 71 0 * * * * * * 4860 0 0 H 72 4753 * 4629 4203 6165 5612 4281 3174 4208 3807 * 5487 3072 4412 3748 4020 2902 4207 * 4881 72 0 * * * * * * 4860 0 0 Q 73 5792 * 2907 1548 * 6581 * * 4489 5358 6234 5729 * 1790 5692 4746 6276 6172 6116 6931 73 0 * * * * * * 4860 0 0 I 74 * * * * 5521 * * 478 * 4804 4566 * * * * * 5949 2591 * * 74 0 * * * * * * 4860 0 0 K 75 3990 * * 5533 * 6270 * * 541 * 6245 * * * 2610 5092 * 6837 * * 75 0 * * * * * * 4860 0 0 S 76 3117 * 4199 2706 * * 5146 7381 1846 4667 * 3776 * 3766 3390 4865 5305 6417 * 6384 76 0 * * * * * * 4860 0 0 A 77 420 6387 * 4262 5149 * * 4767 * 4822 * 6701 * * * 5524 * * 5530 4833 77 0 * * * * * * 4860 0 0 V 78 * * * * 2847 * * 1827 * 4011 5311 * * * * * * 1024 * * 78 0 * * * * * * 4860 0 0 K 79 6833 5873 * 620 * * * 5489 2989 * * 5206 * 4056 5872 4445 5322 * * * 79 25 5849 * 1585 585 * * 4860 1000 0 E 80 3889 * 4365 3243 5541 4884 5757 5180 2341 3939 5313 5110 * 3520 4617 2973 4076 5666 * 5265 80 0 * * * * * * 4860 0 0 L 81 3880 6116 * * 4673 * * 2283 4945 1347 4645 * * 5603 4422 * 6060 3134 * 6474 81 17 * 6426 * * * * 4860 0 0 Y 82 * 4846 * * 639 * * * * 5094 * * * * * 6606 * * 6696 1868 82 46 4998 * 611 1535 0 * 4852 2078 1000 D 83 * * 2332 3543 * 1910 * * 2650 * * 2368 * 4456 * 4295 * * * * 83 0 * * * * * * 4860 0 0 V 84 * * * 5161 * * * 3138 5192 4503 5917 * * 6417 * 7027 5353 484 * 6426 84 0 * * * * * * 4860 0 0 D 85 4857 * 4355 4763 * 5801 5732 * 909 * * 4009 4646 5487 5638 4399 3195 6749 * * 85 0 * * * * * * 4860 0 0 A 86 5673 4846 * * * * * 3934 * * 5849 * 3457 * * * 5598 413 * * 86 0 * * * * * * 4860 0 0 L 87 3025 * 4516 2798 * 6594 * 3263 3196 2834 * 4837 * 5274 5809 4763 3672 3034 * 6670 87 0 * * * * * * 4860 0 0 Y 88 3964 * 3398 6828 * 4349 * * 1276 * * 4315 * 6651 3366 2432 6873 6594 * 6783 88 0 * * * * * * 4860 0 0 V 89 * 5501 * * * * * 2620 * * * * * * * * 5533 333 * * 89 33 6548 6362 3700 115 * * 4860 1000 0 N 90 6028 5197 * * * * 4586 * 5509 * * 577 * 5788 2752 5330 4974 * * * 90 22 6071 * 584 1586 * 0 4840 1636 1000 T 91 6397 * * * * * * 3388 * 5564 5578 * * * * 3469 617 3210 * * 91 15 6549 * 3807 107 * 0 4840 1000 1000 L 92 4328 5847 * * 5344 * 4525 3355 6904 1435 3346 5851 * 3920 6015 4193 5999 3327 * 5524 92 27 7140 6410 0 * * 0 4843 1000 1000 I 93 * * * * * 6493 6113 1645 6826 5988 4589 1265 * * 4615 * 4156 3724 * * 93 113 3731 * 3815 106 0 * 4585 2456 1557 R 94 5647 6223 * * 5481 6262 * 5906 3634 4135 4597 4623 5914 5220 1818 4408 2690 3252 * 4033 94 46 5007 * 3769 110 * * 4724 1688 0 P 95 5146 * 5983 4595 5153 * 6598 4738 2465 4371 4171 5265 1661 6435 4733 3849 3926 6508 * 5949 95 37 5285 * 3807 107 * * 4730 1458 0 N 96 5431 * 3547 6636 * 1522 6646 * 2944 6740 * 2637 5895 * 3649 4168 4509 6279 * 6155 96 40 5196 * 3700 115 * * 4909 1509 0 G 97 4450 * 4584 * 6119 1579 6375 * 1239 * * 6099 * * 3661 4871 * * * * 97 281 2907 4511 3654 119 * * 4845 2785 0 T 98 6025 * 5348 3466 5538 5397 * * 2101 3424 6032 5314 5297 5773 5389 6206 3575 4885 2729 3210 98 146 3382 * 3611 123 0 * 4823 2585 2123 K 99 * * * * * * * * 159 * * 4629 * * 4681 6373 6254 * * * 99 15 6638 * 3700 115 * * 4845 1000 0 K 100 * * * * * * 6360 6115 524 5905 * 6144 * 6097 2300 5826 * 6411 * * 100 0 * * * * * * 4827 0 0 A 101 400 * * * * * * 5778 * 5710 3023 * * 6438 4717 * * 4964 * * 101 0 * * * * * * 4820 0 0 Y 102 * * * 6124 2332 6450 * 2207 * 5681 6036 * * * * 6091 4338 5515 5740 1253 102 0 * * * * * * 4708 0 0 I 103 * 6249 * * * * * 2056 * * * 5497 * * * * 4486 557 * * 103 0 * * * * * * 4734 0 0 R 104 * 5184 * 4996 * * 5345 5554 2313 * * * * 4366 1834 3475 2182 6716 5016 6109 104 0 * * * * * * 4673 0 0 L 105 * * * * 3377 * * 4468 * 328 * * * * * * 5381 4722 * * 105 0 * * * * * * 4706 0 0 T 106 1611 * 4868 4061 * 4325 4369 5941 2980 * 5574 * 4086 * 6572 2561 4768 4626 * * 106 72 * 4363 * * * * 4588 0 0 S 107 2678 * 3430 2603 * 6099 5659 * 2669 * * 4516 1959 * 5394 3838 * * * * 107 0 * * * * 0 * 4552 0 1860 D 108 4988 * 1650 2773 * 1856 * * * * * 3312 4640 * 5905 4417 5451 * * * 108 17 * 6443 * * * * 4568 0 0 Y 109 * * 3515 5314 5063 2969 3332 5412 5588 * * 4444 * 3179 * 3638 * 3249 * 2034 109 29 * 5654 * * 0 * 4568 0 1000 D 110 3887 * 1280 2406 * * * * 3199 * * 4491 5749 3743 6370 5215 5321 5555 * * 110 29 * 5633 * * 0 * 4434 0 1000 A 111 440 * * * * * * 4910 * 4711 * * 4598 * 5421 3718 4299 * * * 111 0 * * * * 0 * 4192 0 1000 L 112 * * * 2954 * * * 1952 4039 1545 4449 * * 4962 4195 4105 * 5760 * * 112 0 * * * * * * 4205 0 0 D 113 4731 * 888 1775 * * * 5047 5393 * * 4415 * * * * * * * 5117 113 0 * * * * * * 4205 0 0 I 114 4900 * * * 5296 * * 2035 * 2328 * * * * * * 5047 1223 * 4669 114 0 * * * * * * 4211 0 0 A 115 414 * * * 5328 3648 * * * 4094 * * * * * * 3538 * * * 115 0 * * * * * * 4193 0 0 N 116 4029 * * 4040 * 4281 * * * 4856 4816 1692 * * * 1779 2992 5056 * * 116 0 * * * * * * 4166 0 0 R 117 * * * 2548 * 4991 * * 1281 * * 5233 * 4124 2099 3861 * * * * 117 0 * * * * * * 4140 0 0 I 118 * * * 4770 * * * 1039 * 1592 3831 * * * * * * 3747 * * 118 0 * * * * * * 3939 0 0 G 119 * * * * * 134 * * 4400 * * * * * * * * * 4586 * 119 0 * * * * * * 3804 0 0 Y 120 * * * * 3280 * * 1763 * 2188 3339 * * * * * 4808 2577 * 3629 120 0 * * * * * * 3681 0 0 I 121 * * * * * * * 1183 * 1468 4013 * * * * * * 2877 * * 121 0 * * 0 * * * 3417 0 0 //