HHsearch 1.5 NAME c9fy0S_ FAM FILE c9fy0S_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9fy0S_.a3m DATE Sat Jan 18 10:15:29 2025 LENG 113 match states, 113 columns in multiple alignment FILT 102 out of 143 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.2 EVD 0.3821 -2.0605 SEQ >ss_pred CCCCCEEEECCCCCCCCCHHHCCCCCCCEEEEEEEEEEEEEEEEEEECCCCEEEEEEEEEEECCCCEEEEECEEEEEEECCCCCEECCCCEEEEECCCCC CCCEEEEEEEEEC >ss_conf 9876445522468863855652877787052346858999999997067885999997588677500376023459998786532113888999704655 4522599999829 >Consensus xxxxxxxxxigxxxxxxpxxxxxDxxcPxxGxxxvrgkxlxGxVvsxkMxKTVvVxvxrxxxhpkYxKxxxrxkkyxaHDpexxxxkvGDxVxIxexRPl SKtKxfxVvexlx >c9fy0S_ VSKGKTVKDPGIPNITIPEKVCEDEDCPYHGSLRVRGITLEGVIVKYRGTKAAVIERQYLYYDSKYKRYERRRSRIHAHVPPCINVREGDKVIIGECRPL SKSISFVVLGKVS >UniRef50_Q03246(3-78:237) 37S ribosomal protein S17, mitochondrial n=11 Tax=Saccharomycetaceae RepID=RT17_YEAST E=1e-13 s/c=1.02 id=27% cov=66% -----------------------------------RQNFLGLVVSQGKMQKTVKVRVETKVFNKKINKELFHRRDYLVHDEGEIS-REGDLVRIEATRPL SKRKFFAIAE--- >UniRef50_UPI00006CFC97(24-95:205) ribosomal protein S17 containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CFC97 E=5e-13 s/c=1.05 id=26% cov=64% ------------------------------------GRELFGTVIQHgKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENFCVT-GDKVVIKSMLP ISTMKHYYV----- >UniRef50_Q9UUB0(5-76:90) 40S ribosomal protein S17, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=RT17_SCHPO E=2e-10 s/c=0.93 id=23% cov=63% -----------------------------------------GIVISRAMPKTAKVRVAKEKFHPVVKKYVTQYQNYMVQDD--LNCNVGDAVTIQPCRPR SATKRFEIIKILS >UniRef50_Q86K64(13-88:127) Probable 28S ribosomal protein S17, mitochondrial n=1 Tax=Dictyostelium discoideum RepID=RT17_DICDI E=2e-06 s/c=0.71 id=32% cov=63% -------------------------------------KFISGVCISKTHTKTAMCQVKRLYFDKgKYSALNYKTTKYMIHDPNDI-CAVGDQVHFRECAP VSKRKAHVV----- >UniRef50_Q0CSK6(63-158:225) Predicted protein n=9 Tax=Trichocomaceae RepID=Q0CSK6_ASPTN E=6e-09 s/c=0.64 id=19% cov=60% ----------------------------------------TGTVVSVgRMDRTVRVSHRHTTWDPYLRKTYPKITSYLVSDPRN-SLREGDVIEFSSGYP KSRHVRHVV----- >UniRef50_Q2JFG7(10-98:102) 30S ribosomal protein S17 n=37 Tax=Bacteria RepID=RS17_FRASC E=1e-20 s/c=1.12 id=28% cov=77% ------------------ASQSTDAAAPARGFRKVR----EGLVVSDKMTKTVVVAVEDRVQHPLYGKTIRRTKKVKAHD-ESGTTGVGDRVLLMETRPL SATKRWRIV---- >UniRef50_UPI0000E48F12(6-72:144) PREDICTED: similar to mitochondrial ribosomal protein S17 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48F12 E=4e-09 s/c=0.93 id=28% cov=59% -------------------------------------KILIGQVVGTKMIRTAKVRVNRLHLDPFVTQYFPKRSTVFAHDPE-EAAKLGDIVLVKE-LPI KKSTH-------- >UniRef50_A9BK75(27-137:153) Rps11 n=2 Tax=Cryptophyta RepID=A9BK75_9CRYP E=2e-29 s/c=1.16 id=37% cov=95% --KKKNFRNIGL-GLKTPIEATKnnffDKKCPFTGNISIRGRIIRGRVVSTKMNRTVIVRRDYLHWIAKYKRFEKRHKNIPCHCSPCFRIQEGDFVTIGQ CRPISKTIRFNVL---- >UniRef50_A8JCF4(1-63:206) Mitochondrial ribosomal protein S17 (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JCF4_CHLRE E=5e-05 s/c=0.77 id=30% cov=57% ------------------------------------------------MQKTVVVAVSYVVWVPKYKVYQKRVARHKARDESQASV-IGDIVRIRKSRKF SREVSYSVVDTL- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * V 1 * * * * * * * 1013 * * * * * * * * * 987 * * 1 0 * * * * * * 1469 0 0 S 2 * * * * * * * * * 1013 * * * * * 987 * * * * 2 0 * * * * * * 1469 0 0 K 3 * * * * * * * * 0 * * * * * * * * * * * 3 0 * * * * * * 1941 0 0 G 4 * * * * 2036 2009 * * 1913 * * 2046 * * * * * * * * 4 0 * * * * * * 1941 0 0 K 5 * * * * * * * * 714 * * * * * 1357 * * * * * 5 0 * * * * * * 2060 0 0 T 6 * * * * * * * 2750 2857 * * 2826 * 2849 1779 * 2816 * * * 6 0 * * * * * * 2288 0 0 V 7 * * * * 3374 * * * * * 2149 * * * * 3436 * 772 * * 7 0 * * * * * * 2617 0 0 K 8 * * * * * * * * 1182 * * * * * 838 * * * * * 8 0 * * * * * * 2935 0 0 D 9 * * 1347 * * * 3978 * * * * 880 * * * * * * * * 9 0 * * * * * * 2935 0 0 P 10 * * * * * * * 272 * 4029 * * 4195 * * * * 4162 * * 10 0 * * * * * * 2966 0 0 G 11 * * * * * 242 * * 4029 * * * * * * 3427 * * * * 11 0 * * * * * * 2966 0 0 I 12 * * * * 3934 * * 1509 * 914 * * * * * * * 4250 * * 12 909 * 1097 * * * * 2999 0 0 P 13 * * * 2042 * * * * 2836 * * 2770 1088 * * * * * * * 13 218 * 2836 * * 0 * 2511 0 2513 N 14 * * 2943 * * 1088 4287 * * 3721 * 2585 * * * * * * 3240 * 14 0 * * * * 0 * 2910 0 1000 I 15 * * * * 2567 * * 1571 * 3249 * 3881 * * * * * 1637 * * 15 0 * * * * * * 3081 0 0 T 16 * * * 3189 * * * * 1038 2854 * 3881 4481 * * * 2713 * * * 16 0 * * * * * * 3081 0 0 I 17 4481 * * 3038 * * * 4449 * 2372 * * 2330 3881 * 4530 1814 * * * 17 0 * * * * * * 3081 0 0 P 18 * * * * * * * * * * * * 0 * * * * * * * 18 0 * * * * * * 3081 0 0 E 19 2569 * * 1848 * * * 4268 1718 * * * * 4200 3702 * 3910 * * * 19 0 * * * * * * 3251 0 0 K 20 3631 * * 1581 * 4092 * * 3503 * * * * * 3143 2163 4200 4404 * * 20 0 * * * * * * 3251 0 0 V 21 1706 * 3910 2507 * * * * * * * * * 2772 * 3377 * 2263 * * 21 0 * * * * * * 3251 0 0 C 22 * 775 * * * * * 2644 * * * * * * * 3466 4268 * 4092 4200 22 0 * * * * * * 3251 0 0 E 23 4404 * 1929 2037 * * * * 4268 * * 2199 * * * 4436 2936 * * * 23 567 1622 * 1750 509 * * 3251 2229 0 D 24 * * 0 * * * * * * * * * * * * * * * * * 24 0 * * * * * * 3288 0 0 E 25 3682 * 3700 3635 * * * * 1303 * * * 1635 * * * 4744 * * * 25 0 * * * * * * 3401 0 0 D 26 3682 * 4823 4132 * * 4362 * 1235 3943 * 2253 * 3617 * * * * * * 26 0 * * * * * * 3401 0 0 C 27 3682 250 * * * * * * * * * * * * * * 3617 * * * 27 0 * * * * * * 3401 0 0 P 28 * * * * * * * * * * * * 117 * 3684 * * * * * 28 0 * * * * * * 3401 0 0 Y 29 3682 * * * 1007 * 4471 * * * * * * * 3617 * * * 2224 3574 29 0 * * * * * * 3401 0 0 H 30 * * * * * * 800 * * * * * * * 3682 * 1936 * * 3530 30 0 * * * * * * 3401 0 0 G 31 * * * * * 123 * * * * * * * * * 3617 * * * * 31 0 * * * * * * 3401 0 0 S 32 * * 3173 4161 3809 * 2570 * 2855 * * 1840 * * * 3134 4010 * * * 32 0 * * * * * * 3457 0 0 L 33 * * * * * 3733 * 1829 * 1191 * * * * 3809 * * 2901 * * 33 0 * * * * * * 3457 0 0 R 34 4197 * * * * * * * 1644 * * 4832 * * 2120 1627 * 4773 * * 34 0 * * * * * * 3585 0 0 V 35 * * * * * 3746 * 1878 * 3181 * * * * * * * 881 * * 35 0 * * * * * * 3585 0 0 R 36 * * * * * * * 4377 3805 * * * 4484 4049 424 * 5051 * * * 36 50 * 4878 * * * * 3989 0 0 G 37 4678 * * * * 738 * * 4010 3772 * * * 3503 3443 * 4444 * * * 37 40 * 5189 * * * 0 4132 0 1000 I 38 * * * * 5676 * 5094 5831 1560 * * 5138 * 1457 2770 5903 5605 5798 * * 38 0 * * * * * 0 4539 0 1440 T 39 * 5761 * 4223 3721 * 5435 1756 * 2780 * 4896 * * * 4379 2407 3094 * * 39 0 * * * * 963 1038 4623 0 1440 L 40 * * * * 2657 * * 2753 5111 844 4732 * * * 6068 * * 5711 6341 5422 40 0 * * * * 0 * 4659 0 1000 E 41 * * 4467 2308 4520 5769 * 5375 3103 5608 6544 * * 3164 5232 3897 2292 3187 * * 41 0 * * * * * * 4721 0 0 G 42 * * * * * 120 * * * 6243 * * * * * 4982 * 5524 6272 * 42 0 * * * * * * 4845 0 0 V 43 * * 4982 5982 6327 * 6656 2908 2875 4057 * * * 5055 3689 5917 2302 2084 * 4726 43 46 * 4982 * * * * 4845 0 0 I 44 * 5464 * * * * * 5517 * 6163 * * * * * * * 87 * * 44 0 * * * * 0 * 4726 0 1000 V 45 4387 * * 4818 * * * 1946 * 6184 * * 6274 5050 5727 5088 3292 1198 * 6138 45 0 * * * * * * 4851 0 0 K 46 6467 5756 * * * 3664 * * 2804 * * 4554 * 4455 4472 734 6184 * * * 46 0 * * * * * * 4851 0 0 Y 47 2898 5467 2459 5050 * 6274 4696 5885 3950 * 5350 2895 * 5737 6031 4632 2704 3289 * 6804 47 197 2969 * 0 * * * 4851 2968 0 R 48 4045 * 4672 6274 5084 4615 * * 879 6605 6973 6556 6405 6070 3463 3573 4979 * * 6463 48 48 5407 6722 0 * * * 4851 1509 0 G 49 3490 6467 6741 * * 3764 4814 * * 5596 592 5877 6603 6398 5007 6784 5825 * * * 49 0 * * * * 0 * 4871 0 1000 T 50 4511 * 1919 3246 * 6486 6532 5825 4785 5412 5447 3252 4392 2571 5299 4986 3537 * * * 50 0 * * * * * * 4871 0 0 K 51 * * 7167 * * 4746 * * 304 * 6888 6532 * 4762 3877 5523 * * * * 51 16 * 6486 * * * * 4871 0 0 A 52 4826 * * * * 6907 5050 * * * 5274 5416 * * * 2849 483 5473 * * 52 0 * * * * 0 * 4867 0 1000 A 53 2678 6171 * * * 5808 * 1861 6626 * * * * * 5330 5058 * 1084 * * 53 0 * * * * * * 4871 0 0 V 54 5805 * * * * * * 3172 2908 5058 4977 6650 * 6617 3657 6152 2612 1325 * * 54 0 * * * * * * 4871 0 0 I 55 6821 5486 * * * * * 3135 * 4569 4452 * * * * * * 382 * * 55 0 * * * * * * 4871 0 0 E 56 3028 4581 * 2497 6349 6824 * 5729 3766 3124 4872 * * 3377 2651 4275 4002 5230 * * 56 0 * * * * * * 4871 0 0 R 57 4911 6349 * 6681 * * 3548 3397 4830 7222 * * 5058 * 3278 * 5609 866 * 5635 57 0 * * * * * * 4871 0 0 Q 58 4298 * 2509 1632 * 6116 * 4947 3926 * * 3995 5192 4709 5092 4114 3698 5429 * 5470 58 0 * * * * * * 4871 0 0 Y 59 5824 * 5317 * * 5450 4070 * 4421 6717 7016 5505 * 7695 1226 6408 3554 6824 5007 2186 59 0 * * * * * * 4871 0 0 L 60 5865 * 6807 4729 5835 * 6258 4704 3595 1688 5011 6987 5824 4145 2411 * 3991 4522 * 3905 60 0 * * * * * * 4871 0 0 Y 61 3961 * * 5772 4608 * 2897 4947 2457 6788 5071 * * 6568 4078 * 5906 1865 * 2966 61 0 * * * * * * 4871 0 0 Y 62 6214 * * 6254 3480 * 5594 6788 2650 3694 6330 * 4120 5775 3426 7292 4371 6164 2582 2318 62 0 * * * * * * 4871 0 0 D 63 * * 2553 * 5824 * 1066 3503 * 5785 6440 3582 * * * 4890 * 3881 * 5000 63 0 * * * * * * 4871 0 0 S 64 4263 * * 6141 * * * 6977 2265 6396 6339 4720 1122 6350 3344 4834 5802 6689 * 5466 64 35 5401 * 0 * * * 4851 1000 0 K 65 * * * * 5822 * 5436 5465 971 2717 4946 6612 * * 3128 * 4584 4383 * 5178 65 0 * * * * * * 4851 0 0 Y 66 * * * * 3979 * * 3923 * 3677 * * * * * * 5653 3463 6690 573 66 0 * * * * * * 4851 0 0 K 67 6723 * 5291 4645 * 2524 3551 6622 1936 4150 5834 2982 * 4952 3478 4205 5822 * * * 67 0 * * * * * * 4851 0 0 R 68 5401 * * 5653 * * * * 748 * * * * 4597 1869 6167 * 4958 * * 68 0 * * * * * * 4851 0 0 Y 69 * * * 4414 2860 * * 3150 4529 4476 5802 * 6779 6104 3357 6171 3253 4739 6112 1715 69 0 * * * * * * 4851 0 0 E 70 4697 * * 2797 3704 6128 * 2488 5080 4826 3495 5401 * 4762 * * * 2160 5374 3536 70 0 * * * * * * 4851 0 0 R 71 7202 * * 7202 6157 6167 * 5237 2047 5181 5788 4380 3455 6431 1703 3785 3994 5187 * 5401 71 0 * * * * * * 4851 0 0 R 72 4890 * 5139 * * 4361 5510 * 1838 5804 * * * 5435 1337 5292 5169 4078 * 4714 72 0 * * * * * * 4851 0 0 R 73 6815 * * * 6155 * 3036 5471 3489 6112 * 5301 * * 2026 2770 1881 5320 * 6040 73 0 * * * * * * 4851 0 0 S 74 6133 * * 6003 * * * 7084 1325 * 5244 6497 * 6040 3188 2605 2116 7309 * * 74 0 * * * * * * 4851 0 0 R 75 * * 5474 6167 * * 6112 5416 1032 * * 3011 * * 2421 5080 4028 5205 * 6977 75 0 * * * * * * 4851 0 0 I 76 * 5887 * * 2788 * 6133 2416 * 3751 4262 * * * * * * 3821 * 1186 76 0 * * * * * * 4851 0 0 H 77 4330 * * * 4227 * 2384 6167 3253 2632 3040 5668 5089 4617 4979 3808 5117 5735 6339 4301 77 0 * * * * * * 4851 0 0 A 78 1065 6604 * * 5485 * * 4552 * * * * * * * 6128 6723 1304 * 5802 78 18 * 6344 * * * * 4851 0 0 H 79 * * * * * * 182 * * * * * * 6023 4821 4803 * * * 4967 79 54 * 4779 * * 0 * 4834 0 1000 V 80 6742 4862 496 * * * * * * 3069 6111 6920 * * * 5412 6202 3868 * * 80 455 * 1886 * * 0 * 4863 0 2080 P 81 5304 * 3471 1974 * * 6011 * 6720 * * * 1216 5906 * 2663 * * * * 81 145 * 3391 * * 55 4728 4827 0 3441 P 82 4799 * 3124 1141 * 3471 6565 * 5057 * * 4801 2667 7658 6102 4259 * * * * 82 89 * 4062 * * 222 2807 4773 0 2724 C 83 * 1941 4870 5013 * * 4544 6738 3936 5058 * 1571 6171 4960 5740 4182 4383 6580 * 6396 83 204 6931 3018 2322 322 182 3074 4804 1000 2673 I 84 5847 * 5026 3816 3231 5803 * 2035 * 3248 4751 1903 * 5646 * 4562 * 5102 6464 * 84 303 3882 3043 0 * 0 * 4820 2070 3224 N 85 4018 5513 2794 2008 * 5584 * * 4024 6224 6441 3920 * 4333 6470 2245 3997 5970 * * 85 136 5216 3990 1000 1000 0 * 4757 1267 2987 V 86 2169 1662 * * 5821 * * 3513 * 3073 * * * * * 5421 5309 2526 * 6017 86 21 * 6102 * * 319 2335 4826 0 2403 R 87 4471 * 5705 4343 * 4474 6133 * 1590 * * 2798 * 3528 2632 4279 4868 5834 * * 87 29 * 5629 * * 0 * 4826 0 1587 E 88 6982 6439 7609 2019 * * 6635 2698 6567 3440 5616 * 4575 6153 * 5796 6092 1503 * * 88 0 * * * * 0 * 4826 0 1000 G 89 * * 5834 * * 43 * * * * * 6396 * * * * * * * * 89 0 * * * * * * 4851 0 0 D 90 * * 69 5558 * * * * * * 6361 * * * * 6234 * * * * 90 0 * * * * * * 4851 0 0 K 91 6040 * * 6408 4764 * * 2250 2871 3368 4941 5821 * 5401 3482 5616 3222 2519 * 5213 91 0 * * * * * * 4851 0 0 V 92 * * * * 5013 * * 2538 * 5834 * * * * * * * 360 * * 92 0 * * * * * * 4851 0 0 I 93 6520 * * 2620 * * 4811 3461 3758 2734 5056 * * 4117 2600 5040 3061 3997 6609 * 93 0 * * * * * * 4841 0 0 I 94 4216 5024 * * 3432 * * 641 * 3964 5748 * * * * * 5818 3621 * * 94 0 * * * * * * 4841 0 0 G 95 2921 * 5709 2834 * 2847 6383 3604 3485 * 3858 7526 * 4328 3686 3281 5180 4217 * * 95 0 * * * * * * 4824 0 0 E 96 3929 * * 713 * 6649 4009 * 4924 * * * 4086 5471 * 3392 4549 * * * 96 27 * 5763 * * * * 4824 0 0 C 97 * 1304 * * * 3556 4842 5690 * * 5610 5756 * * * 3355 1788 5569 * 6906 97 27 5756 * 0 * 0 * 4797 1000 1000 R 98 4314 * * 7064 * 6488 6581 6450 4721 4481 6945 * 5366 4936 614 * 6999 * 4022 4691 98 0 * * * * * * 4824 0 0 P 99 * * * * * * 6383 * 3292 * * * 291 * 3861 * * * * * 99 0 * * * * * * 4824 0 0 L 100 6890 * * * 4851 * * 1683 4495 1227 4581 * * * 4374 6181 4688 5327 * 7274 100 0 * * * * * * 4805 0 0 S 101 5066 * * * * * * * 5739 * * 5443 * * * 107 * * * * 101 0 * * * * * * 4805 0 0 K 102 3673 * * * * * * * 412 * * * * * 2745 * 5582 * * * 102 0 * * * * * * 4805 0 0 S 103 * * 4585 5164 6443 4958 3740 * 4607 4020 5582 4290 * 6588 3003 3432 1333 * * 6328 103 0 * * * * * * 4805 0 0 I 104 * * * * * * * 3402 498 * * * * * * 5443 5739 2686 * * 104 0 * * * * * * 4805 0 0 S 105 3761 * * * 5340 * 3073 * 4392 * * 6795 4932 * 1423 2103 4113 * * 5075 105 0 * * * * * * 4805 0 0 F 106 * * * * 1184 * 2886 * * * * * * * * 5304 * * 1657 3609 106 0 * * * * * * 4781 0 0 V 107 4480 5500 * 4950 * * 4847 3711 5057 5914 4997 4156 * * 2812 4445 3873 1469 * 4731 107 0 * * * * * * 4778 0 0 V 108 6208 * * * 5944 * * 3086 * 2227 * * * * * * * 647 * * 108 0 * * * * * * 4749 0 0 L 109 4236 * * 6298 5861 * * 2298 5798 2186 5890 * * * * 5726 3595 1576 * 5505 109 0 * * * * * * 4296 0 0 G 110 5690 * 4111 758 * 2506 * * 4798 * * * * * 3451 * 5159 * * * 110 0 * * * * * * 4172 0 0 K 111 * * * * * * * 3576 1445 * * * * 4787 3069 * 4260 1551 * * 111 0 * * * * * * 3996 0 0 V 112 * * * * * * * 3378 * 715 * * * * * * * 1763 * * 112 0 * * * * * * 3866 0 0 S 113 3220 * 3390 * * * * * * * * 1804 * * * 969 * * * * 113 0 * * 0 * * * 3180 0 0 //