HHsearch 1.5 NAME c9fsrJ_ FAM FILE c9fsrJ_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9fsrJ_.a3m DATE Sat Jan 18 10:48:11 2025 LENG 56 match states, 56 columns in multiple alignment FILT 37 out of 39 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.1 EVD 0.4380 1.5696 SEQ >ss_pred CEEECCCCCCEEEEECCCCCEEEEECCCCEEEEECCEEEEECCCCCCCCCCCCCCC >ss_conf 93778877748899428860389937686499505228874067752233234789 >Consensus MmxFCPxCxnxLxixxxxxxxrfxCxTCPYxxxIxxxixxrxxlxxKevddVlGGx >c9fsrJ_ MLLFCPGCGNGLIVEEGQRCHRFSCNTCPYVHNITRKVTNRKYPKLKEVDDVLGGA >UniRef50_C4V7E3(1-53:105) Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V7E3_NOSCE E=8e-05 s/c=0.91 id=35% cov=96% -MFFCPLCTNILAIDKLNIQTAFICNTCPYQYKINMVFNKSARNNVIAVDKVLG-- >UniRef50_Q54K02(1-55:111) RNA polymerase III subunit n=1 Tax=Dictyostelium discoideum RepID=Q54K02_DICDI E=1e-12 s/c=1.35 id=40% cov=98% -MLFCPLCANMLLIDPDLQDTRYFCQTCPYIFHIKNKVVTKVPLQRKIIDsDVFGG- >UniRef50_A8BG20(1-53:105) RNA polymerase III subunit C11 n=3 Tax=Giardia intestinalis RepID=A8BG20_GIALA E=1e-10 s/c=1.27 id=39% cov=96% -MLFCPCCGNLLLIELSGDV-QFYCKTCAYRYTLSGQISRSLTLTRKSVDPVLGG- >UniRef50_B6AHL8(1-54:106) DNA-directed RNA polymerase III subunit RPC10, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AHL8_9CRYT E=6e-10 s/c=1.21 id=25% cov=98% MVQFCPHCHNILLIREIDERTALFCQTCPFIQKLNKQIVKVTELTPKKPEEAQG-- >UniRef50_B5Y459(1-60:111) RNA polymerase C subunit 11 kDa n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y459_PHATR E=4e-09 s/c=1.04 id=41% cov=100% -MWFCPLDGTLLQVQirsgaVPAENSFFYCSTCPYSCSIDAPRTVKTPTKRKVVDDILGGA >UniRef50_B9I5C8(1-56:112) Predicted protein n=5 Tax=Magnoliophyta RepID=B9I5C8_POPTR E=5e-08 s/c=1.06 id=34% cov=95% -MEFCPTCGMLLRYETPNMGQaaRFYCPTCPYFASIESrvKIKRKQKLAKKEIEPIF--- >UniRef50_Q8SSB3(1-49:104) DNA-DIRECTED RNA POLYMERASE III 12.5kDa SUBUNIT n=1 Tax=Encephalitozoon cuniculi RepID=Q8SSB3_ENCCU E=4e-07 s/c=1.13 id=26% cov=89% -MLFCPLCSSMLVVKKQAIGNELSCKMCGYLYAISEEISRTVGMTPKKSE------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 3208 0 0 L 2 5318 * * * * * * 5329 * 1608 1049 * * * * * 4651 3337 * * 2 0 * * * * * * 4536 0 0 L 3 4501 * * 3289 2375 * * 4561 * 1803 * 5327 * 3416 * 4232 3768 5235 4057 * 3 0 * * * * * * 4536 0 0 F 4 * * * * 59 * * * * * * * * * * * * 4651 * * 4 0 * * * * * * 4153 0 0 C 5 * 100 * * * * * * * * * * * * * * * * * 3896 5 0 * * * * * * 4108 0 0 P 6 4620 * * * * * * 4888 * * * * 112 * * * * * * * 6 0 * * * * * * 4108 0 0 G 7 * 5060 * 5060 4122 3535 2670 * * 2183 * 3049 * 5298 * 3817 2736 5243 * 5302 7 0 * * * * * * 4108 0 0 C 8 * 89 4070 * * * * * * * * * * * * * * * * * 8 0 * * * * * * 4108 0 0 G 9 2596 * * * * 1132 3073 * * * * 5102 * * 3896 2890 5148 * * * 9 0 * * * * * * 4108 0 0 N 10 * 5120 3929 * * * * * * * 4262 523 * * * 4581 3111 * * * 10 0 * * * * * * 4102 0 0 G 11 3782 * * * 5327 3588 5416 2293 * 1585 2340 * * * * * * 4038 * * 11 0 * * * * * * 4102 0 0 L 12 * * * * * * * * * 0 * * * * * * * * * * 12 0 * * * * * * 4102 0 0 I 13 3753 * * * * * * 2107 * 1878 * * * 2849 4332 * 3328 2903 * * 13 0 * * * * * * 4102 0 0 V 14 * * * * * * * 1221 * 3596 4914 * * * * * * 1394 * 3745 14 0 * * * * * * 4102 0 0 E 15 3843 * 3656 1555 * * * * 3733 * * * * 2762 4129 2580 5117 4837 * * 15 150 3338 * 1880 457 * * 4102 1712 0 E 16 4116 * * 2440 * 5401 * * 2612 4192 * 5013 2887 4238 3560 3462 3923 4174 * * 16 38 * 5275 * * * * 4102 0 0 G 17 2964 * 3775 * * 1684 4137 4106 * 5146 4480 4627 3574 4562 4819 3923 * 4995 * * 17 38 5248 * 2322 322 0 * 4089 1000 1000 Q 18 3761 * 2327 2336 * 3566 3817 * * 4096 * 4213 * 3361 * * 2957 4837 * * 18 32 5491 * 3700 115 * * 4102 1000 0 R 19 5258 * 3846 2199 * 5013 4914 3843 6139 * 4296 3777 4604 4210 3023 3271 3900 5275 * * 19 70 4399 * 2014 410 * * 4102 1470 0 C 20 * 2753 5305 5381 * 1640 * * * 4628 * 3990 * 5163 3949 3703 2931 3691 * * 20 345 2920 3636 922 1083 * * 4102 1996 0 H 21 * * * * * * 2788 5254 * 5342 2944 1636 * 5000 5113 4410 3511 * * 2664 21 202 3446 4681 1000 1000 0 * 4001 1455 1910 R 22 2411 * * 4500 3410 * * * 3743 * * * * 4200 956 * 5107 * * * 22 0 * * * * 0 * 4019 0 1000 F 23 * * * * 633 * * * * 2105 * * * * * * * 4359 5339 4342 23 0 * * * * * * 4045 0 0 S 24 2899 * 5418 3101 2929 4984 5519 3697 4752 * 4808 * * 5252 * 3066 5475 4758 5408 2619 24 0 * * * * * * 4045 0 0 C 25 * 0 * * * * * * * * * * * * * * * * * * 25 0 * * * * * * 4045 0 0 N 26 4808 * * * * 5252 * * 3342 6351 * 2446 3148 4156 1776 2452 * * * * 26 0 * * * * * * 4045 0 0 T 27 4181 * * * * * * * * * 4527 * * * * 4307 315 4415 * * 27 0 * * * * * * 4045 0 0 C 28 * 103 * * * * * * * * * * * * * * * * 3864 * 28 0 * * * * * * 4045 0 0 P 29 5033 * * * * 4527 * * * * * * 254 * 4808 * 4272 * * * 29 0 * * * * * * 4045 0 0 Y 30 * 3864 * * 3853 * * * * * * * * * * * * * * 214 30 0 * * * * * * 4045 0 0 V 31 5252 * * 3057 4161 * 5418 3275 3863 3901 * * * 3644 5033 4089 4359 1656 * * 31 0 * * * * * * 4045 0 0 H 32 3437 2233 * * 1923 * 2133 * * * * * * 5044 * 5475 * * * 2731 32 0 * * * * * * 4045 0 0 N 33 3608 * * 4984 * * 3479 * 2962 * * 2724 2126 * * 2750 3274 6351 * 5405 33 0 * * * * * * 4045 0 0 I 34 * * * * 4752 * * 581 * 2635 * * * * * * * 2908 * * 34 51 4859 * 0 * * * 4045 1000 0 T 35 * * 4051 2101 * * * * 3577 5241 * 2656 * 4286 4453 2886 2564 4779 * * 35 0 * * * * * * 4439 0 0 R 36 4051 * * 2404 * 3080 3347 * 2998 * 3812 4214 * 4200 3535 3451 4267 * * * 36 191 3011 * 476 1832 * * 4439 1994 0 K 37 * * * 2968 5148 * * * 1482 * * 5322 2729 2754 4145 5446 4992 4296 * * 37 0 * * * * * * 4415 0 0 V 38 * * * * 4296 * * 1412 * 2578 4384 * * * 4040 * * 2100 * 3968 38 0 * * * * * * 4415 0 0 T 39 * * * 5159 2929 * * * 4179 * * 3873 * 4150 * 2779 2173 2867 * 2677 39 0 * * * * * * 4331 0 0 N 40 4588 * 3801 3921 5041 * * 3568 2702 * * 5681 * 4872 2583 2726 4107 3976 * 4082 40 0 * * * * * * 4331 0 0 R 41 * * 5041 4585 * * * * 1526 * * * * * 1420 3547 4456 3719 * * 41 0 * * * * * * 4331 0 0 K 42 3685 * * 4872 * * 5134 4984 2143 4849 4017 * * 4179 3558 3351 2380 3738 * * 42 0 * * * * * * 4331 0 0 Y 43 3602 * 4766 2929 4440 4456 * 4872 3285 * 4529 4156 2754 * 3259 4588 4052 * * 3897 43 41 5159 * 1000 1000 * * 4331 1000 0 P 44 * * 4150 * 3146 * * * * 1242 2707 4298 3363 * * * 3976 * * 4529 44 0 * * * * * * 4331 0 0 K 45 3663 * * 2943 * * 3417 * 2061 * * 4298 3652 5090 5124 * 2729 3079 * * 45 0 * * * * * * 4331 0 0 L 46 * * * * * * 4588 * 2391 3363 * * 2257 3672 1590 * * 4298 * * 46 0 * * * * * * 4331 0 0 K 47 * * 4588 4872 * * * 4298 269 * * * * * * * * 4529 * * 47 0 * * * * * * 4331 0 0 E 48 4265 * 4214 1018 * * * 5042 2629 * * * * 4539 * 3948 * 3313 * * 48 69 4419 * 0 * * * 4217 1000 0 V 49 3655 * * * * * * 2351 3764 * 4741 * 4473 * 5418 4423 * 1004 * * 49 0 * * * * * * 4217 0 0 D 50 * * 741 1317 * * * * * * * * * * * * * * * * 50 47 4973 * 0 * * * 4217 1000 0 D 51 3752 * 886 2558 * * 5021 * 4210 * * * 2942 * * * * * * * 51 0 * * * * * * 4133 0 0 V 52 4209 * * * * * * 2234 * * * * 4765 * * * * 522 * * 52 0 * * * * * * 4091 0 0 L 53 * * * * 1732 * * 4158 * 893 * * * 4189 * * * * * 4327 53 0 * * * * * * 4073 0 0 G 54 * * * * * 0 * * * * * * * * * * * * * * 54 0 * * * * * * 3810 0 0 G 55 * * * * * 0 * * * * * * * * * * * * * * 55 0 * * * * * * 3365 0 0 A 56 632 * * * * 1494 * * * * * * * * * * * * * * 56 0 * * 0 * * * 2158 0 0 //