HHsearch 1.5 NAME c9frkQ_ FAM FILE c9frkQ_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9frkQ_.a3m DATE Sat Jan 18 10:29:50 2025 LENG 53 match states, 53 columns in multiple alignment FILT 35 out of 37 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.5 EVD 0.4370 1.4244 SEQ >ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCEEEHHCHHHHHHHHHHHHHHCCCEECC >ss_conf 98887344444763200113027686220123178899999776402811049 >Consensus xkxxxpxprxxGkGsRxCrxCgxxxglIrkYglxlCRqCFRExAxdiGFxKyw >c9frkQ_ GKYKPPAERKYGKGVQSCQRCGSKDSVIQKYGIYLCRQCFREVAYELGFRKYW >UniRef50_Q12ZT7(6-49:50) 30S ribosomal protein S14P n=17 Tax=Archaea RepID=RS14_METBU E=3e-09 s/c=1.43 id=53% cov=85% --------KNFGRGANECKRCGRKQGLVRKYGIYLCRHCFREIAHDMGFEKY- >UniRef50_Q74NE6(17-67:69) 30S ribosomal protein S14P n=20 Tax=Archaea RepID=RS14_NANEQ E=2e-11 s/c=1.38 id=56% cov=98% -KHNKPKERKFGKGARRCERCGRYDGIIRRYGLYLCKDCFKEVAHELGFFKW- >UniRef50_C5PBJ3(10-55:56) 40S ribosomal protein S29, putative n=2 Tax=Coccidioides RepID=C5PBJ3_COCP7 E=3e-10 s/c=1.44 id=49% cov=89% ------RPRNYGKGSRQCRVCAHKAGLIRKYGLLVCRQCFREKSQDIGFVKY- >UniRef50_A5UL74(2-46:47) Ribosomal protein S14p n=7 Tax=cellular organisms RepID=A5UL74_METS3 E=4e-09 s/c=1.39 id=54% cov=87% -------PRKYGKAAKKCTRCGDHSAMISRYGLSLCRQCFREIAPKIGFKKY- >UniRef50_A2DYA8(8-56:57) 40S ribosomal protein S29, putative n=1 Tax=Trichomonas vaginalis RepID=A2DYA8_TRIVA E=5e-09 s/c=1.27 id=44% cov=94% ---KHPRDNAKGSVERSCRICGKRRGVIRQYRLNICRRCFRERAELLGFKKY- >UniRef50_A8B7H6(100-135:137) Ribosomal protein S29A n=2 Tax=Giardia intestinalis RepID=A8B7H6_GIALA E=4e-07 s/c=1.54 id=46% cov=70% ---------------RECRICGNYNSVYRKYGLFICRRCFKENAGKIGFVK-- >UniRef50_Q013Q2(120-156:157) RS29_CULQU 40S ribosomal protein S29 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013Q2_OSTTA E=3e-06 s/c=1.44 id=39% cov=72% ---------------RRSRVCENQWAIIRKYNLNICRQCFREYAKDIGFQKH- >UniRef50_B9ZHX2(28-64:65) Ribosomal protein S14 n=2 Tax=Halobacteriaceae RepID=B9ZHX2_NATMA E=7e-05 s/c=1.31 id=47% cov=72% ---------------RVCRDTGREQGLIGTYDIWLCRQSFREMARDMGFRKY- >UniRef50_Q8SS73(9-54:55) 40S ribosomal protein S29 n=1 Tax=Encephalitozoon cuniculi RepID=RS29_ENCCU E=0.0001 s/c=1.03 id=41% cov=83% -------RKPFGKGSRSCVSCYTFRGIIRK--LMMCRRCFREYAGDIGFAIY- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 1000 * * * * 1000 * * * * * * * * * * * * * * 1 0 * * * * * * 1277 0 0 K 2 * * * * * * * * 0 * * * * * * * * * * * 2 0 * * * * * * 1506 0 0 Y 3 * * * * * * 2040 1980 * * * * * * * * * * * 990 3 0 * * * * * * 1649 0 0 K 4 * * * * * * * * 771 * * 1833 * * 2909 * * * * * 4 0 * * * * * * 2034 0 0 P 5 * * * * * * 2498 * 772 * * * 2075 * * * * * * * 5 0 * * * * * * 2024 0 0 P 6 * * * 3223 * * * * * * * * 396 * 2911 * * * * * 6 0 * * * * * * 2024 0 0 A 7 3519 * * * * * * * 1521 * * * * * 1060 * * * 3558 * 7 0 * * * * * * 2196 0 0 E 8 * * 3538 3196 * * * * 4610 * * 4807 668 * 4052 * 4701 * * * 8 0 * * * * * * 2497 0 0 R 9 * * * * * * * * 1391 * * 3625 * * 895 * * * * * 9 0 * * * * * * 2516 0 0 K 10 3625 * * * * * * 4984 1240 * * 2290 4098 * 3785 * 3412 4853 * * 10 0 * * * * * * 2516 0 0 Y 11 * * * * 1523 * * * 3766 * 3537 * * * * * * * * 1022 11 0 * * * * * * 2540 0 0 G 12 * * * * * 0 * * * * * * * * * * * * * * 12 0 * * * * * * 2545 0 0 K 13 4751 * * * * * * * 684 * * * 3758 5144 2886 3834 * * * 4928 13 0 * * * * * * 2545 0 0 G 14 3238 * * * * 280 * * * * * * * * * * * 3834 * * 14 0 * * * * * * 2545 0 0 V 15 1827 * * 3834 * * * 4928 * * * * * 4993 * 884 * 4577 * * 15 0 * * * * * * 2545 0 0 Q 16 * * * * * * * * 3861 * * 3662 * 3889 350 * * * * * 16 0 * * * * * * 2601 0 0 S 17 * * * 2739 * 4106 4742 * 3477 * * * 5409 2699 2359 2596 * 3277 * 5388 17 0 * * * * * * 2667 0 0 C 18 * 60 * * * * * * * * * * * * * 4629 * * * * 18 0 * * * * * * 2690 0 0 Q 19 * * * 4267 * * * * 5374 * 4243 * * 3103 752 4441 4958 3594 * * 19 0 * * * * * * 2599 0 0 R 20 5703 * 3908 * * * * 2815 * * * * * * 1396 4373 * 1540 * * 20 0 * * * * * * 2599 0 0 C 21 * 205 * * * * * * * * * * * * * * 2918 * * * 21 0 * * * * * * 2599 0 0 G 22 2872 * * 4629 * 620 * * * * * * * * * 3388 5133 * * 4373 22 0 * * * * * * 2599 0 0 S 23 * * 3677 * * 5521 3181 * 4709 * * 1899 * 4243 1705 4355 3738 * * * 23 29 5675 * 0 * * * 2599 1000 0 K 24 * * * 4071 4373 5675 2825 * 2670 * 3929 5635 6303 3403 2318 5012 * * * 2738 24 0 * * * * * * 2599 0 0 D 25 3463 * 3227 * * 3078 2987 * 4854 * * 4469 5675 2710 3026 3288 5596 * 4061 * 25 98 3929 * 1000 1000 * * 2599 1000 0 S 26 2475 * * * * 527 * * * * * * 4243 * * 3769 * * * * 26 0 * * * * * * 2599 0 0 V 27 * * * * * * * 2079 * 841 4958 * * * * * * 2533 * * 27 0 * * * * * * 2599 0 0 I 28 * * * * * * * 337 * * * * * * * * * 2616 * 4469 28 0 * * * * * * 2599 0 0 Q 29 * * * * * 2958 * * * * * * * 4188 395 4162 * * * * 29 0 * * * * * * 2599 0 0 K 30 * * * * * * * 4243 468 * 5634 * * 4709 2942 * 4804 * * * 30 71 * 4373 * * * * 2599 0 0 Y 31 * * * * * * 4208 * * * * * * * * * * * * 80 31 0 * * * * * 0 2548 0 1000 G 32 * * 2900 4722 * 465 * * * * * 3972 * * 4650 * * * * * 32 0 * * * * 0 * 2548 0 1000 I 33 * * * * * * * 1928 * 544 4289 * * * * * * * * * 33 0 * * * * * * 2599 0 0 Y 34 * * 4492 * 4469 * * * * 4661 2581 1435 * * * 4150 * * 3469 2416 34 0 * * * * * * 2599 0 0 L 35 * 4518 * * * * * 1842 * 1094 2890 * * * * * * 3754 * * 35 0 * * * * * * 2599 0 0 C 36 * 98 * * * * * * 3929 * * * * * * * * * * * 36 0 * * * * * * 2599 0 0 R 37 * * * * * * * * 4267 * * * * * 77 * * * * * 37 0 * * * * * * 2599 0 0 Q 38 * * 4267 * * * 3700 * * * * * * 520 2524 * * * * * 38 0 * * * * * * 2599 0 0 C 39 * 206 * * * * * * * * * * * * * 3900 * 3921 * * 39 0 * * * * * * 2598 0 0 F 40 * * * * 0 * * * * * * * * * * * * * * * 40 0 * * * * * * 2598 0 0 R 41 * * * * * * * * 3358 * * * * * 148 * * * * * 41 0 * * * * * * 2598 0 0 E 42 * * * 116 * * * * * * * * * 4562 * 4851 * * * * 42 0 * * * * * * 2598 0 0 V 43 * * 4851 * * * * 2560 2865 5460 3900 3640 * 5493 3260 * * 2390 * 2546 43 0 * * * * * * 2598 0 0 A 44 150 * * * * * * * * * * * * * * 3342 * * * * 44 0 * * * * * * 2598 0 0 Y 45 4164 * * 4703 * 3409 3375 * 3100 3921 * 4629 2654 3356 2718 4177 * * * 5141 45 0 * * * * * * 2598 0 0 E 46 * * 834 3094 * * * * 2341 4703 * 4078 * * * * 5220 * * * 46 0 * * * * * * 2598 0 0 L 47 * * * * * * * 1000 * 1837 2184 * * * * * * * * * 47 0 * * * * * * 2598 0 0 G 48 * * * * * 0 * * * * * * * * * * * * * * 48 0 * * * * * * 2598 0 0 F 49 * * * * 99 * * * * * * * * * * * * * 3921 * 49 0 * * * * * * 2598 0 0 R 50 4358 * 5357 3469 4262 * 5123 3743 1476 * * 5580 * 4619 3119 4844 * 3524 * 5443 50 0 * * * * * * 2598 0 0 K 51 * * * * * * * 4358 72 * * * * * * * * * * * 51 0 * * * * * * 2598 0 0 Y 52 * * * * 4508 * 3894 * * 5061 * * * * * * * * 3781 347 52 0 * * * * * * 2511 0 0 W 53 * * * * * * * * * * * * * * * * * * 0 * 53 0 * * 0 * * * 1408 0 0 //