HHsearch 1.5 NAME c9e8je_ FAM FILE c9e8je_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9e8je_.a3m DATE Sat Dec 7 10:46:02 2024 LENG 41 match states, 41 columns in multiple alignment FILT 2 out of 4 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.2 EVD 0.5004 3.6151 SEQ >ss_pred CHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC >ss_conf 91443662432113430455101145799999999985089 >Consensus defeefpaeexxxvwednwddxxxexdfxxqlrxelxkhgx >c9e8je_ DEFEEFPAEEDAHVWEDNWDDDNVEDDFSNQLRAELEKHGY >UniRef50_A8Q8I2(44-76:80) Chain A, Structure Of A Brca2-Dss1 Complex., putative n=1 Tax=Brugia malayi RepID=A8Q8I2_BRUMA E=0.001 s/c=1.35 id=62% cov=83% --------EEELNVWEDNWDDEANENDFAKQLRDELAKHGH # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 0 * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 E 2 * * * 0 * * * * * * * * * * * * * * * * 2 0 * * * * * * 1000 0 0 F 3 * * * * 0 * * * * * * * * * * * * * * * 3 0 * * * * * * 1000 0 0 E 4 * * * 0 * * * * * * * * * * * * * * * * 4 0 * * * * * * 1000 0 0 E 5 * * * 0 * * * * * * * * * * * * * * * * 5 0 * * * * * * 1000 0 0 F 6 * * * * 0 * * * * * * * * * * * * * * * 6 0 * * * * * * 1000 0 0 P 7 * * * * * * * * * * * * 0 * * * * * * * 7 0 * * * * * * 1000 0 0 A 8 0 * * * * * * * * * * * * * * * * * * * 8 0 * * * * * * 1000 0 0 E 9 * * * 0 * * * * * * * * * * * * * * * * 9 0 * * * * * * 1287 0 0 E 10 * * * 0 * * * * * * * * * * * * * * * * 10 0 * * * * * * 1287 0 0 D 11 * * 1000 1000 * * * * * * * * * * * * * * * * 11 0 * * * * * * 1287 0 0 A 12 1000 * * * * * * * * 1000 * * * * * * * * * * 12 0 * * * * * * 1287 0 0 H 13 * * * * * * 1000 * * * * 1000 * * * * * * * * 13 0 * * * * * * 1287 0 0 V 14 * * * * * * * * * * * * * * * * * 0 * * 14 0 * * * * * * 1287 0 0 W 15 * * * * * * * * * * * * * * * * * * 0 * 15 0 * * * * * * 1287 0 0 E 16 * * * 0 * * * * * * * * * * * * * * * * 16 0 * * * * * * 1287 0 0 D 17 * * 0 * * * * * * * * * * * * * * * * * 17 0 * * * * * * 1287 0 0 N 18 * * * * * * * * * * * 0 * * * * * * * * 18 0 * * * * * * 1287 0 0 W 19 * * * * * * * * * * * * * * * * * * 0 * 19 0 * * * * * * 1287 0 0 D 20 * * 0 * * * * * * * * * * * * * * * * * 20 0 * * * * * * 1287 0 0 D 21 * * 0 * * * * * * * * * * * * * * * * * 21 0 * * * * * * 1287 0 0 D 22 * * 1000 1000 * * * * * * * * * * * * * * * * 22 0 * * * * * * 1287 0 0 N 23 1000 * * * * * * * * * * 1000 * * * * * * * * 23 0 * * * * * * 1287 0 0 V 24 * * * * * * * * * * * 1000 * * * * * 1000 * * 24 0 * * * * * * 1287 0 0 E 25 * * * 0 * * * * * * * * * * * * * * * * 25 0 * * * * * * 1287 0 0 D 26 * * 1000 * * * * * * * * 1000 * * * * * * * * 26 0 * * * * * * 1287 0 0 D 27 * * 0 * * * * * * * * * * * * * * * * * 27 0 * * * * * * 1287 0 0 F 28 * * * * 0 * * * * * * * * * * * * * * * 28 0 * * * * * * 1287 0 0 S 29 1000 * * * * * * * * * * * * * * 1000 * * * * 29 0 * * * * * * 1287 0 0 N 30 * * * * * * * * 1000 * * 1000 * * * * * * * * 30 0 * * * * * * 1287 0 0 Q 31 * * * * * * * * * * * * * 0 * * * * * * 31 0 * * * * * * 1287 0 0 L 32 * * * * * * * * * 0 * * * * * * * * * * 32 0 * * * * * * 1287 0 0 R 33 * * * * * * * * * * * * * * 0 * * * * * 33 0 * * * * * * 1287 0 0 A 34 1000 * 1000 * * * * * * * * * * * * * * * * * 34 0 * * * * * * 1287 0 0 E 35 * * * 0 * * * * * * * * * * * * * * * * 35 0 * * * * * * 1287 0 0 L 36 * * * * * * * * * 0 * * * * * * * * * * 36 0 * * * * * * 1287 0 0 E 37 1000 * * 1000 * * * * * * * * * * * * * * * * 37 0 * * * * * * 1287 0 0 K 38 * * * * * * * * 0 * * * * * * * * * * * 38 0 * * * * * * 1287 0 0 H 39 * * * * * * 0 * * * * * * * * * * * * * 39 0 * * * * * * 1287 0 0 G 40 * * * * * 0 * * * * * * * * * * * * * * 40 0 * * * * * * 1287 0 0 Y 41 * * * * * * 1000 * * * * * * * * * * * * 1000 41 0 * * 0 * * * 1287 0 0 //