HHsearch 1.5 NAME c9d3rC_ FAM FILE c9d3rC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9d3rC_.a3m DATE Sat Aug 16 13:41:28 2025 LENG 96 match states, 96 columns in multiple alignment FILT 56 out of 58 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.1 EVD 0.3699 -2.5337 SEQ >ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 986720047889999999866787726999999999999999999999999998607667778999999999757999999999999999964229 >Consensus rxxxxxxsyxxYixkvLKqVhpdxxiSxkamximnSfvnDiferIAxEAsxLaxxxkrxTitxreIqtAvrllLPgeLaKxAvxegtkAvxxxxss >c9d3rC_ RKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA >UniRef50_UPI00004F1E5C(98-193:195) PREDICTED: similar to Histone H2B type F-M (H2B.s) (H2B/s) n=2 Tax=Bos taurus RepID=UPI00004F1E5C E=3e-29 s/c=1.34 id=48% cov=98% --HCHHDSFSsfaTYFPRVLRQIHKGMSLSHDSVNILDSFVKDTFERIAEEAGRLAGDNKRRTITTEDIEAAVRLLLPGKLGKYAVLKATKSLITYRT- >UniRef50_A4I7E8(174-268:278) Histone H2B n=9 Tax=Trypanosomatidae RepID=A4I7E8_LEIIN E=2e-24 s/c=1.19 id=45% cov=99% --HKRSQHWDLYIHRALRRFFKRGTLSKAAVRVLSSFIEDMFNRIQTEAVFVAKINKVKTLTAREIQTSARLLLPPELAKHAMSEGTKAVAKYNAS >UniRef50_Q2HW83(21-101:109) Histone H2B; Histone-fold n=1 Tax=Medicago truncatula RepID=Q2HW83_MEDTR E=7e-13 s/c=0.93 id=30% cov=85% --------WQLELTNIRKQVCPDLKLQLGGMKMMDSMVNYFMKKLIAEA---TKHVDSNCLDVREIMAAVYQVFPEQLAKNAHQRGLEAVNQ---- >UniRef50_Q54BC2(17-103:226) Histone H2B.v1 n=1 Tax=Dictyostelium discoideum RepID=H2BV1_DICDI E=8e-19 s/c=1.09 id=39% cov=92% ---------GIYIKKLIKQINPACRIQVKSVQILTSLIRDTTISIMNEAFHLVQLSNKRTLSARDVQTSVRLCTVGEISRHAVSEGVKRVTNFNSA >UniRef50_B0DVY0(39-113:114) Predicted protein (Fragment) n=3 Tax=Laccaria bicolor S238N-H82 RepID=B0DVY0_LACBS E=3e-13 s/c=1.02 id=44% cov=78% -RDTSEESYSSYIY---KGVHPDTGISKKAMAILKSFVNNIFKHIATEPSSTCHVGLRLSHSVFMLITSINFVLQDQI------------------ >UniRef50_Q28GH7(24-92:98) Novel protein n=3 Tax=Xenopus (Silurana) tropicalis RepID=Q28GH7_XENTR E=3e-10 s/c=0.96 id=46% cov=71% -KVKSKGRYSSFIYRVLKQ---NQRKSSFASLSKESTGKETCLCIADEAARLSLYNKRKTITCQEIQSAVK------------------------- >UniRef50_C4V8I2(34-124:137) Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V8I2_NOSCE E=2e-12 s/c=0.81 id=29% cov=81% --------FKSAIKKIAKDINPDQTvfLTSQAIAILCAIAYDIVSTCGEVASEFSKKVSKQTVGADEIVAAFEILLKGELKKLALRE----------- >UniRef50_B7XI58(40-128:133) tRNA and rRNA cytosine-C5-methylase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XI58_ENTBH E=3e-11 s/c=0.78 id=27% cov=92% --------FKSAIKKCLKESVPDgtVTITRNSLAVLCGIAQSILEDASVLSAELAQKVNKKTIGGEEVITAFELMLTGELKKLCVREIKNTLSKMNT- >UniRef50_Q7KWR7(2-80:474) Histone H2B.v2 n=1 Tax=Dictyostelium discoideum RepID=H2BV2_DICDI E=2e-10 s/c=0.85 id=26% cov=83% ------ESYSPSIQKLCVFLKPESDISNTGISYLNNFLADMSNAIIVESIHSSKSHKHKTILIEDIESALNVVFPSEIADSIINQ----------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 2264 * * * * * 337 * * * * * 1 0 * * * * * * 2433 0 0 K 2 * * * 3735 * 3848 * * 906 * * 3711 3792 * 2528 * * * * * 2 0 * * * * * * 2844 0 0 R 3 * * 2867 * * 4546 1945 * 3040 * * * * * 1799 3638 * 3813 * * 3 0 * * * * * * 3550 0 0 S 4 4606 2597 * * * * * * 1207 * * 4536 * * * 1991 3924 * * * 4 0 * * * * * * 3559 0 0 R 5 * 4909 * * 3849 * 3106 * 4010 * * 4362 2896 * 1606 2604 * 4536 * * 5 0 * * * * * * 3559 0 0 K 6 * 4491 * 2944 4688 3485 3120 * 1395 * * * * * 3925 3156 * 5364 * * 6 0 * * * * * * 3663 0 0 E 7 5157 * 2800 1348 * 2977 * 5008 4599 * * 4495 * 4467 3497 4928 5311 * * * 7 0 * * * * * * 3837 0 0 S 8 * * 4612 5431 * 4017 3890 * 5065 * * 4425 * 5176 4456 937 2893 * * * 8 46 4982 * 2807 222 * * 3832 1000 0 Y 9 * * * * 1534 * * * * 5561 * * * * * * * * 2970 983 9 25 * 5849 * * * * 4339 0 0 S 10 2737 * 4858 * 5126 3535 * * 2477 * * 3800 * 4394 3505 1740 6125 * * * 10 22 6038 * 1585 585 * 0 4393 1000 1000 V 11 5855 * * * * * 5960 2638 * 2456 6657 4327 3973 * 4171 2180 3245 3075 * * 11 0 * * * * * 0 4393 0 1000 Y 12 3164 * * 4394 4220 * * * * 5960 * * * * * 4341 * * * 470 12 0 * * * * * 0 4393 0 1000 V 13 * * * * 3439 * * 883 * 3482 5305 * * * 5621 4871 5414 2534 * * 13 0 * * * * 0 * 4326 0 1000 Y 14 * * * * 4559 * 3819 5789 2602 6012 * 3889 3263 4417 5229 4547 4037 * 5257 1674 14 56 * 4718 * * * * 4324 0 0 K 15 5622 * * * * * * * 958 * * 4418 * 6019 1375 * * * * 5867 15 17 * 6422 * * * 0 4253 0 1000 V 16 4887 4800 * * * 5396 * 2233 * 3014 * * * * * 4012 5735 1031 * * 16 0 * * * * * 0 4379 0 1428 L 17 4679 4359 * * * * * 3363 * 502 6098 * * 6106 4455 4859 * * * * 17 0 * * * * 980 1021 4379 0 1428 K 18 * * * * * * * * 320 * * * * * 3225 5779 5222 4415 * * 18 27 5745 * 2585 263 * 0 4329 1000 1000 Q 19 5521 * 4263 2636 4415 4695 * * 6091 4251 * 6083 * 927 4981 4638 * * * * 19 75 * 4301 * * 0 * 4329 0 1000 V 20 5649 * * * 4965 * * 1874 * 4380 6254 * * * * 4801 * 790 * * 20 0 * * * * * 0 4261 0 1354 H 21 * 4442 5160 4961 4205 * 1058 5315 4380 * * 3087 * * 5172 4890 5884 4042 * 5092 21 0 * * * * * 0 4261 0 1354 P 22 * * * 4610 * * 5092 * 4122 5670 * 5699 519 5096 * 5428 4264 5010 * * 22 0 * * * * 874 1138 4261 0 1354 D 23 4789 * 1029 2913 5120 2894 4607 * * * * 3691 5900 * 4986 6508 * * * * 23 52 4833 * 1000 1000 * 0 4308 1000 1000 T 24 * 4789 * * 5984 4986 * 3761 5300 2142 3930 4931 * 3472 5376 4406 1857 4186 * * 24 24 5900 * 3585 126 * 0 4308 1000 1000 G 25 * * 4406 * * 1220 * 5120 4459 * * 4931 * * 3398 2505 2780 * * * 25 54 4765 * 1000 1000 * 0 4308 1000 1000 I 26 6199 * * * 5778 * * 777 5068 1789 4607 * * * * * * 5355 * * 26 48 4931 * 1000 1000 0 * 4308 1000 1000 S 27 * * * * * * * * * * * * * 3659 * 450 2404 * * * 27 0 * * * * * * 4324 0 0 S 28 5493 * * 5206 * 3473 6219 * 2940 3922 * 3937 6047 3943 3780 1472 6098 4858 * 5429 28 0 * * * * * * 4324 0 0 K 29 4993 * 4696 5157 5138 4484 6278 * 1205 * 5789 3905 5555 3120 3466 * 4417 * * 5386 29 0 * * * * * * 4324 0 0 A 30 1077 * * 5503 * 3185 * * * 5206 * * * * * 1960 3299 6903 * * 30 0 * * * * * * 4324 0 0 M 31 * * * * * * * 2583 * 3481 1101 * * 5503 * 4172 4802 2609 * * 31 0 * * * * * * 4324 0 0 G 32 3209 * 3809 3945 * 3675 5116 6723 3577 4129 5246 3730 * 3727 3985 2281 4857 5847 * * 32 0 * * * * * * 4436 0 0 I 33 * * * * 6044 * 5116 1060 * * 4533 5945 * * * 4103 * 1681 * 4422 33 0 * * * * * * 4436 0 0 M 34 * * * * * * 5748 6795 5033 1539 1181 * * * * * 5035 3620 * 4472 34 0 * * * * * * 4436 0 0 N 35 * 3251 2112 5033 * * * 4398 4787 * * 1070 * * * 4502 5110 * * * 35 0 * * * * * * 4436 0 0 S 36 4745 * * * * 3674 * 5420 * * 4646 3775 5122 * * 588 4214 * * * 36 27 * 5757 * * * * 4436 0 0 F 37 * * * * 858 * * 3246 * 2587 3036 * * * * * 4975 * * 5470 37 0 * * * * * 0 4427 0 1000 V 38 3819 * * * * 4972 * 2227 5019 3617 3198 * * * * 4915 * 1220 * * 38 0 * * * * 0 * 4498 0 1000 N 39 3780 * * 4988 * 6198 4544 * 2987 * * 1200 * 4257 3851 4510 * 5233 * 3541 39 0 * * * * * * 4507 0 0 D 40 * * 513 4070 * 4866 5233 * * * * 4147 * * * 4229 * * * 3856 40 0 * * * * * * 4507 0 0 I 41 * * * * 3738 * * 1125 * 3699 2339 5233 * 5724 * * 3343 4379 * * 41 0 * * * * * * 4507 0 0 F 42 * 5125 * * 681 * * * * 3169 3525 * * * * 4406 4863 3877 * * 42 0 * * * * * * 4378 0 0 E 43 * * 3359 1012 * 5173 5200 4863 3332 5125 * 3440 * 4487 * 4798 * * * 5913 43 0 * * * * * * 4378 0 0 R 44 4406 4423 4908 * * * 4765 5200 3389 * * 5231 * 5091 908 4142 3877 * * * 44 0 * * * * * * 4378 0 0 I 45 4908 4798 * * * * * 502 * 2509 * * 5913 * * * * 4959 * * 45 0 * * * * * * 4378 0 0 A 46 504 * * * * 4798 * 3245 * * 4863 * * 5043 * 4908 5913 4694 * * 46 29 * 5636 * * * * 4378 0 0 G 47 3358 5222 2900 2833 * 3698 * * 4519 * 4574 4809 * 5114 4915 3168 2864 3436 * * 47 0 * * * * * 0 4376 0 1000 E 48 * * 4781 288 * * * * 4549 3923 * * * * * * * 4791 * * 48 0 * * * * * 0 4376 0 1000 A 49 312 * * 6207 6019 * * * * * * * 4722 * * 3189 5788 * * * 49 67 * 4471 * * * 0 4376 0 1000 S 50 1957 5275 * * 4697 2945 * 4289 * 5973 * 5851 * * * 1209 * 5002 * * 50 0 * * * * * 0 4236 0 1578 R 51 * * * 3232 3990 5910 3151 5166 4640 4892 * 3981 * 4089 1536 3130 5758 * * * 51 0 * * * * * 0 4236 0 1578 L 52 * * * * 4733 * * 4263 * 512 4641 * * 5259 * 4269 4615 4319 * * 52 0 * * * * 816 1212 4225 0 1578 A 53 1202 3963 * * * 4713 * * * 4565 4241 * * * * 2537 3374 3332 * * 53 0 * * * * * 0 4376 0 1000 H 54 * 4691 6215 * 5306 6253 2634 * 1725 4281 * * 8281 2635 2384 5726 * * * 5672 54 21 * 6086 * * * 0 4376 0 1000 Y 55 3999 * 6219 * * * 3596 4300 2786 3402 * 4896 * 5029 * 3733 * 4135 * 1495 55 0 * * * * * 0 4371 0 1446 N 56 4113 * * * * 4714 3490 * 3948 * * 1814 * * 5293 2738 3054 2747 * 5564 56 0 * * * * * 0 4381 0 1446 K 57 * * 4443 * * 3354 6726 * 1109 4714 * 3011 * 5564 2941 3843 * * * * 57 0 * * * * * 0 4381 0 1446 R 58 * * * * * * 3132 * 1628 * * 6073 * 5660 1194 4056 * 5027 * * 58 0 * * * * 0 * 4340 0 1446 S 59 * 5366 * * * 5299 * * 2331 3054 6304 4044 6953 3559 2889 2163 3602 5356 * * 59 0 * * * * * * 4334 0 0 T 60 * 4491 * * * 5666 * 6071 * * * * * * * 4729 179 * * * 60 0 * * * * * * 4341 0 0 I 61 * * * * * * 4679 1234 * 1245 5203 * * * 5714 * * 3880 * * 61 0 * * * * * * 4300 0 0 T 62 5203 * 4120 * * 2454 5972 5988 * 4443 * 6133 * 5412 * 2389 1229 * * * 62 0 * * * * * * 4300 0 0 S 63 2351 5150 * * 5834 4907 4872 3848 4565 6020 * * 4476 * * 1422 4772 3198 * * 63 0 * * * * * * 4300 0 0 R 64 * * 3880 3267 4679 3984 5988 * 3813 * * 5203 * 4275 898 * * * 5412 * 64 0 * * * * * * 4300 0 0 E 65 5412 * 1838 730 * * * * * * 4679 * 4799 * * * * 5714 * * 65 0 * * * * * * 4300 0 0 I 66 * * * * * * * 544 * 3143 * * * * * * * 2315 * * 66 0 * * * * * * 4300 0 0 Q 67 * * * 2724 * * * 3238 5181 * 4573 6219 * 681 * * * 4800 * * 67 0 * * * * * * 4253 0 0 T 68 2619 * 6711 5416 * 5240 7388 * * * 4715 * * 4486 * 2170 1204 4928 * * 68 0 * * * * * * 4253 0 0 A 69 322 * * 5645 * 5750 * * * * * * 7388 * * 2869 5723 * * * 69 0 * * * * * * 4253 0 0 V 70 4276 * * * 3270 * * 3698 * 4323 4698 * * * * * 5477 607 * * 70 0 * * * * * * 4199 0 0 R 71 * 5716 5297 3270 * * 3142 * 2771 * * 3530 * * 1191 * * * * 3887 71 0 * * * * * * 4199 0 0 L 72 * * * * 4212 * 5675 3548 5195 528 * * * 4493 5318 * * 4302 * * 72 0 * * * * * * 4164 0 0 L 73 * 4826 * * 5459 * 5675 4160 * 1172 4285 * * * * * 6648 1468 * * 73 0 * * * * * * 4164 0 0 L 74 * * * * 3238 * * 5388 * 295 * * * * * * 4826 5675 * * 74 0 * * * * * * 4164 0 0 P 75 5459 * * * * * * * 3443 * * * 396 4755 * * 4234 4826 * * 75 0 * * * * * * 4164 0 0 G 76 4915 * 4009 4493 * 646 4913 * 5171 * * * 4334 * 5121 3608 * * * * 76 0 * * * * * * 4164 0 0 E 77 * * 2933 615 * 5557 * * 3685 * * * * 3094 * * * * * * 77 0 * * * * * * 4143 0 0 L 78 * * * * * * * 2437 * 359 4808 * * * * * * * * * 78 0 * * * * * * 4094 0 0 A 79 929 4140 * * * 2821 * * 3623 4864 * 5217 * 4614 4760 4146 * * * * 79 0 * * * * * * 4028 0 0 K 80 * * 4314 4864 * * * * 479 * * 5976 * 5546 3155 * 5082 * 5748 * 80 0 * * * * * * 4028 0 0 H 81 * * * * * * 984 * * 2252 * 3555 * * 4657 4314 * * * 3188 81 0 * * * * * * 4028 0 0 A 82 228 4449 * * * * * 3712 * * * * * * * * * 5362 * * 82 0 * * * * * * 4028 0 0 V 83 5748 * 4864 4785 * * 4362 2377 * 4822 3410 * * * 5265 * 5116 1043 * * 83 0 * * * * * * 4028 0 0 S 84 2131 * 5265 * * * * * * 4347 * 3553 * 4362 2714 1393 5082 * * * 84 0 * * * * * * 4028 0 0 E 85 * * 4864 675 4104 * 5116 * 4120 * * * * 3230 3816 * * 5872 * * 85 0 * * * * * * 4028 0 0 G 86 3222 * * * * 338 * 4218 * * * * * * * * * 4388 * * 86 0 * * * * * * 3808 0 0 T 87 * * 3871 * * * 4388 * 4218 3750 5479 4977 * 5086 * 3004 991 4488 * * 87 0 * * * * * * 3808 0 0 K 88 * * * 3655 * * * * 755 * 4511 2840 * 5387 3865 5086 5479 * * * 88 0 * * * * * * 3808 0 0 A 89 224 * * * * * * * * * * * * * 4488 4452 4218 * * * 89 0 * * * * * * 3808 0 0 V 90 4711 * * * 4422 * * 3938 * 2275 4511 * * * * * * 738 * * 90 30 * 5604 * * * * 3808 0 0 T 91 3977 * * 4916 * * 3828 3560 5067 4685 6234 3695 * * * 1828 1929 4484 * * 91 0 * * * * 0 * 3796 0 1000 K 92 * * * * * 5759 5550 * 1210 * 5387 2593 5381 4223 2437 * 4320 * 5273 * 92 0 * * * * * * 3808 0 0 Y 93 5376 * * * 1469 * 6228 * * * 3556 * * * * * * * * 954 93 0 * * * * * * 3374 0 0 T 94 * * * 4264 * * * 3321 3114 5483 4064 2017 * * 4970 4646 1593 * * * 94 0 * * * * * * 3371 0 0 S 95 3572 * 3979 * 5419 * 4585 * 4749 * * * * * 5058 865 2548 * * * 95 0 * * * * * * 3451 0 0 A 96 2160 * * * * * * * * * * * * * * 365 * * * * 96 0 * * 0 * * * 2906 0 0 //