HHsearch 1.5 NAME c9d3rA_ FAM FILE c9d3rA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9d3rA_.a3m DATE Sat Aug 16 16:29:35 2025 LENG 97 match states, 97 columns in multiple alignment FILT 102 out of 139 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.7 EVD 0.3786 -2.5084 SEQ >ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC >ss_conf 9877463899999985178356420368999999999961878636489999999999999999999999999844983037689999999657469 >Consensus xrxrpgxxaLxEIrxxQxstxllIpkxpFxRLVreIxxxxxxxxRxxxxALxALQeAaExyLvxlfedaxxxaxHakRvTixxkDixLxxrirgxxx >c9d3rA_ HRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA >UniRef50_Q8JKV9(1020-1088:1111) Histone h3, h4 n=1 Tax=Heliothis zea virus 1 RepID=Q8JKV9_9VIRU E=9e-09 s/c=0.89 id=29% cov=68% ----------------------FIPTLPFCRAWKNIEIQIDSyqvvHLRYRGQALLLMRDVTECYLARLLEAAYIVMLNSGRKTLMAKDFK--------- - >UniRef50_Q54Z07(33-82:89) Histone H3.v2 n=1 Tax=Dictyostelium discoideum RepID=H3V2_DICDI E=2e-06 s/c=1.07 id=33% cov=53% -------------------------------------------YRMSVGAIHALRTAFECYMNIIMTDCAIMAAHGKRKTITDRDIAFHQYIK---- >UniRef50_D1YVU1(4-69:70) Archaeal histone n=2 Tax=Euryarchaeota RepID=D1YVU1_METPS E=1e-05 s/c=0.77 id=35% cov=68% -----------------------ISKAPIARLLSQAGGD-----RISAEAVDEMVKYTEDYVLKVGTEASKLCIHAGRKTIKADDIKLAVeRLR---- >UniRef50_C5P239(1-61:208) Putative uncharacterized protein n=8 Tax=Coccidioides RepID=C5P239_COCP7 E=1e-07 s/c=0.94 id=27% cov=57% --------------------------------------EIEHEYCWQCTAIELLQKAAEAILCTLFECSVMAMAHYKHIMVNADNMKLVLGI----- >UniRef50_D2XB48(146-224:232) Histone H3 n=1 Tax=Marseillevirus RepID=D2XB48_9VIRU E=2e-11 s/c=0.88 id=30% cov=82% ----------QEVRSQMRSTCLIIPKERFRTMAKEISKKEGHDVHIAEAALDMLQVIVESCTVRLLEKALVITYSGKRTRVTSKDIETA-------- >UniRef50_Q9HGK9(376-451:479) Uncharacterized protein C800.13 n=1 Tax=Schizosaccharomyces pombe RepID=YHLD_SCHPO E=3e-07 s/c=0.74 id=32% cov=78% -------------RRYSKSSTLVLPETNIRKLANSYSQK-----KIAGSVIEELTTASELFFKQIANDLSAFADHAHRKTIDTQDvVLLMKRQR---- >UniRef50_C5GTA3(28-109:206) Predicted protein n=4 Tax=Ajellomyces dermatitidis RepID=C5GTA3_AJEDR E=3e-13 s/c=0.93 id=33% cov=86% -------KSLCEICFYQKSENLIFLKTIFTHLIHEI---NERNHQFQHFILDVIQVTAEFTLITLFKYNIKTMTHHSCVTLTVRDTQLIINI----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * H 1 * * * * * * 782 * * * * 3601 * 4230 * * * * * 1822 1 0 * * * * * * 2799 0 0 R 2 * * * * * * * * 3089 * * 4802 * * 240 * * * * * 2 23 * 5986 * * * * 3549 0 0 Y 3 3605 * * * 2146 * 3660 5670 4342 5635 * 4932 * * 3277 5328 * * 3726 1799 3 0 * * * * 0 * 3605 0 1000 R 4 * * * * * * 4022 * 1656 * * * 4660 * 782 * * * * * 4 0 * * * * * * 3668 0 0 P 5 3670 * * * * * * 4083 5813 4905 * * 609 3661 * 5012 * 5501 5413 * 5 30 * 5590 * * * * 3940 0 0 G 6 6287 * * * 5644 447 * 5759 4277 * 5300 * * * 5483 3850 * 4433 * * 6 0 * * * * 0 * 3934 0 1000 T 7 3283 * 4168 5482 5970 * * 5342 3944 5628 5163 5333 4708 4292 5782 3205 1350 4946 * * 7 0 * * * * * * 4018 0 0 V 8 5230 5704 * * * 6161 * 6044 2521 2717 4848 4148 * 4107 3573 * 5341 1552 * * 8 0 * * * * * * 4128 0 0 A 9 620 * * * * 5695 4803 * * 5780 * * * * * 4151 5302 2468 6218 * 9 0 * * * * * * 4217 0 0 L 10 * * * * * * * 3684 * 260 * * * 5731 5477 * * 4440 * * 10 20 6178 * 1000 1000 * * 4181 1000 0 R 11 5542 3716 * * * * 4627 * 1971 5208 6936 6755 * 3169 1263 * * * 5225 7013 11 13 6809 * 1585 585 * * 4426 1000 0 E 12 * * 4844 221 * * * * 4679 * 6445 * * 4487 * 6348 * * * * 12 0 * * * * * * 4458 0 0 I 13 * * * * * * * 160 * 6237 5996 * * * * * * 3721 * * 13 0 * * * * * * 4494 0 0 R 14 4756 5417 * * * * 4037 * 3584 6015 6311 6414 * 4554 602 * 5314 6541 * 5802 14 0 * * * * * * 4593 0 0 R 15 4296 * * 5329 4208 * 4190 * 1864 6036 * 4803 5332 4139 1726 5097 5950 * * 4051 15 17 * 6414 * * * * 4593 0 0 Y 16 * * * * 3650 * 4114 4897 5949 1893 5989 * * 4106 * * * * * 1090 16 0 * * * * * 0 4587 0 1000 Q 17 * * * 5323 * * * * 5406 * 5083 6295 * 243 4967 4957 * * * * 17 24 5949 * 1585 585 0 * 4587 1000 1000 K 18 3362 * 6537 5379 * * 5153 * 1428 5317 5501 5490 * 4661 1972 3729 5119 * * * 18 0 * * * * * * 4593 0 0 S 19 6738 * 6413 * 6466 4370 4866 5953 5962 * 6330 4271 * 6569 6009 791 2437 * * * 19 0 * * * * * * 4593 0 0 T 20 5310 * 5378 3590 6670 5499 * 5387 * * * 5632 3808 * * 4189 833 3492 6015 * 20 10 * 7225 * * * * 4593 0 0 E 21 * 5137 2167 2539 * 3666 4479 * 3980 5491 7085 2962 * 4097 5254 4842 4076 4863 * 5742 21 0 * * * * * 0 4613 0 1000 L 22 * 6440 * * 3089 * 6019 5983 * 644 6562 5379 4524 * 6221 5407 4065 5331 * * 22 13 * 6760 * * * 0 4613 0 1000 L 23 6228 6077 * * 4155 * * 2523 * 743 4622 * * * * 5312 * 3670 * * 23 0 * * * * 450 1900 4637 0 1133 I 24 * 6107 * * 3288 * * 574 * 2725 5686 * * * * * * 4985 * 6770 24 0 * * * * * 0 4682 0 1000 R 25 5518 * * 6052 * * 7499 * 4840 4235 * 6712 856 4517 2363 3848 * * * * 25 0 * * * * * 0 4682 0 1000 K 26 6594 * * 5180 6923 * 5753 6038 734 6017 * * * 4963 2211 5987 5201 6323 * * 26 0 * * * * * 0 4682 0 1000 L 27 2166 * * 5155 * 4879 * 3906 6940 1277 5845 6457 * 6318 4616 3975 3611 * * * 27 0 * * * * * 0 4682 0 1000 P 28 4523 4682 * * * 6107 * 4486 * * * 5180 791 5886 4159 3071 6901 4245 * * 28 0 * * * * * 0 4682 0 1000 F 29 * * * * 137 * * 4374 * 5281 5886 * * * * * * * * * 29 0 * * * * * 0 4682 0 1000 Q 30 2382 4945 * 4788 6001 4712 4118 3974 * 7033 5062 5987 * 2494 3675 2356 4486 6018 * * 30 0 * * * * * 0 4682 0 1000 R 31 6090 5537 * * * * 5489 * 3562 * 6970 * * * 356 5919 5174 * * 5409 31 0 * * * * * 0 4748 0 1000 L 32 5215 6030 * 6638 5295 * * 5712 * 452 4738 * * * * * * 2890 * * 32 0 * * * * * 0 4748 0 1000 V 33 2937 5629 * * * * * 2764 * 4920 * * * * * * * 618 5868 * 33 0 * * * * * 0 4748 0 1000 R 34 * 5537 * 6193 * * 4666 * 2453 * * 5331 * 3781 673 5784 * * * * 34 0 * * * * * 0 4748 0 1000 E 35 * * 4506 583 * 5332 * * 4301 * * 5868 * 4272 5492 3623 4963 * * 6879 35 0 * * * * * 0 4748 0 1000 I 36 5784 6278 * * 4528 * * 670 * 2994 * * * * * * 4991 3114 * 5331 36 71 6536 4745 1000 1000 * 0 4748 1000 1000 A 37 2111 4352 5147 4547 * 4568 * 3937 * 3601 4052 * * 5252 * 2958 2645 3579 * * 37 13 6812 * 1585 585 * 0 4691 1000 1956 Q 38 4358 4725 4834 3608 7282 5176 5240 4625 3901 3554 4610 4111 5450 2012 3668 6608 5125 4571 * 6164 38 0 * * * * * 0 4691 0 1956 D 39 5094 * 2975 2105 6961 4801 6313 * 2326 5330 5327 4133 6312 3920 5466 3494 4609 6702 * 6987 39 206 5013 3295 1304 749 376 2126 4710 1977 1956 F 40 5226 5050 * 5031 2653 * 4495 2740 5756 3166 4512 3834 * 5638 * 3819 6880 4258 6265 2728 40 195 3099 6669 1314 742 2317 323 4554 3075 3076 K 41 5190 * 4361 3715 5829 2708 6473 5341 2903 4375 5811 4285 6285 4614 4847 2402 3694 5074 * 7463 41 105 3836 * 1154 861 2071 392 4584 2574 2941 T 42 3670 * 3235 3863 * 3713 3567 * 6052 * * 4161 2719 4152 3576 3878 2983 6818 6509 6876 42 320 2330 * 1211 816 1235 798 4548 3492 2862 D 43 4994 * 2046 2784 * 4128 3774 * 3903 * * 2538 3200 5256 4772 4929 7050 * * * 43 158 3271 * 1731 517 * 0 4662 2724 2002 L 44 5977 5220 * * 2442 5615 4560 3071 * 1809 4685 * * 6613 * 6824 * 3736 5708 2701 44 61 4589 * 1021 980 371 2142 4679 1819 2002 R 45 * 5186 * * * * 4108 6122 3666 * 7227 6091 * 3874 608 4341 * * 5240 * 45 19 6230 * 0 * 0 * 4985 1000 1000 F 46 * * * * 1406 * * 1792 * 5782 5294 * * * * * * 4895 2274 4329 46 0 * * * * * * 4986 0 0 Q 47 3570 * 5794 5403 * * 6464 * * * * 5016 * 1366 3303 3221 2088 * * * 47 0 * * * * * * 5018 0 0 S 48 2353 5675 4999 4452 * 3556 4469 6974 3230 6886 6269 * 2863 7246 4374 2799 5447 4581 * 4611 48 0 * * * * * * 5018 0 0 S 49 3888 * 3326 2032 5399 3410 6978 6626 6396 5680 5433 5840 5014 3538 7684 2414 3967 * * 7163 49 0 * * * * * * 5153 0 0 A 50 543 4412 * * * 6334 * 5068 * * * * * * * 3892 3597 3750 * * 50 0 * * * * * * 5153 0 0 V 51 * * * * 4914 * * 1861 * 785 4453 6268 * * * * * 4250 * * 51 7 * 7684 * * * * 5153 0 0 M 52 3850 * 2774 2236 6316 4959 5309 4641 4731 2281 4978 4656 6655 3810 * 5184 * 4696 * * 52 9 * 7368 * * 0 * 5151 0 1000 A 53 618 4714 5495 4469 * * * 4492 * 3922 4595 * * * * 4656 5437 5130 * * 53 0 * * * * * 0 5152 0 1000 L 54 6676 * * * 4895 * * 2670 * 492 3972 * 6670 * * * * 6073 * * 54 0 * * * * * 0 5152 0 1000 Q 55 * * * 5221 * * 4385 6810 6024 * 4695 * * 387 4248 * 5822 5186 * * 55 0 * * * * 0 * 5152 0 1000 E 56 5247 5673 5718 1162 5601 5498 * * 4658 6353 * * * 3441 5770 5177 2981 3109 * 6271 56 0 * * * * * * 5153 0 0 A 57 704 5688 * * * * * 3959 * 5901 7158 * * * * 3180 3529 3971 * 5812 57 0 * * * * * * 5153 0 0 S 58 1276 5500 * * 4807 * * 6598 * 6435 * * * * * 2267 2293 3389 * * 58 0 * * * * * * 5153 0 0 E 59 * * 4515 98 * * * * * * * * * * 5496 * * * * * 59 0 * * * * * * 5151 0 0 A 60 1635 4457 3258 5571 4353 6249 * 5211 * 4941 3584 5601 4912 5502 * 3771 5088 5065 3774 5622 60 5 * 8326 * * * * 5151 0 0 Y 61 * 5264 * 5198 1717 * 4636 4479 * * 5440 * * 6438 * * 3649 6027 * 1225 61 32 * 5493 * * * 0 5154 0 1000 L 62 5421 * * * 3266 * * 3366 * 736 3581 * * * * 6308 5240 4247 * * 62 0 * * * * * 0 5123 0 1308 V 63 5674 5020 6698 3707 * * 6622 3436 5819 5007 * 6415 * 6134 * 6542 2517 998 * * 63 0 * * * * * 0 5123 0 1308 G 64 5922 5721 4654 4258 * 3231 4446 6415 3859 5780 7060 4537 * 1872 3261 3740 3079 * * * 64 0 * * * * 724 1342 5123 0 1308 L 65 4829 * * 4308 3903 * 6015 3665 * 974 4069 * * 5761 4106 * 7272 3979 5493 5976 65 0 * * * * * 0 5154 0 1000 F 66 5210 * * * 763 4186 * * * 2230 3650 * * * * 4790 * * * * 66 0 * * * * * 0 5154 0 1000 E 67 4309 * 3965 889 * 4862 * * 3579 * * 5317 * 3668 6085 4586 4101 6772 * * 67 0 * * * * * 0 5154 0 1000 D 68 5030 4621 901 4216 * 6929 4282 6408 5264 4727 4739 4819 * 5291 * 7260 6946 7007 * 3582 68 14 * 6653 * * * 0 5154 0 1000 T 69 1441 3535 5705 * * 4240 * * * 3126 * 5059 * * * 2195 3597 5167 * * 69 0 * * * * * 0 5159 0 1374 N 70 5585 * 6258 * 7009 4883 6831 4052 * 3767 5266 2005 * 3164 5228 3261 4319 4273 * 2623 70 0 * * * * * 0 5159 0 1374 L 71 3162 * * * * * * 3241 3051 1505 3402 6585 5475 5528 3905 * 4643 4894 * 5643 71 0 * * * * * 0 5159 0 1374 C 72 3423 1506 * * 4404 * * 3916 * 2458 4320 6747 * * * 6490 4004 4558 * 3575 72 0 * * * * 734 1326 5159 0 1374 A 73 1177 4025 * * * * * 6262 * * 3042 * * * * 3292 2144 4890 * * 73 0 * * * * * 0 5154 0 1000 I 74 4002 * 4799 5674 4906 * 6213 2046 4183 2221 5760 4061 * 4947 5348 4946 4001 5856 * 3719 74 0 * * * * * 0 5154 0 1000 H 75 * * * * 6212 * 217 * 6085 * * 5712 * * 4937 5264 * * * 4902 75 0 * * * * * 0 5154 0 1000 A 76 960 3657 * * * 2965 5065 * * * * * * * 3093 3510 5503 * * 5515 76 0 * * * * * 0 5154 0 1000 K 77 6742 * 6797 6657 * 2776 3814 * 1098 * * 3490 * 5193 3508 3586 * * * * 77 0 * * * * * 0 5154 0 1000 R 78 * 4351 * * * * 5515 * * * * * * 5443 142 * * * * * 78 0 * * * * * 0 5154 0 1000 V 79 5682 * 5493 6262 * * * 3095 2423 4291 5443 * * * * * 4703 918 * * 79 0 * * * * * 0 5154 0 1000 T 80 * * * * * * * 4701 * 5761 5515 * * * 5264 * 160 * * * 80 0 * * * * * 0 5154 0 1000 I 81 * * * * * * * 1402 * 1260 6657 * * * * * 6494 2448 * * 81 0 * * * * * 0 5154 0 1000 M 82 6740 * 3398 3393 4541 * 7220 * 3912 5168 1662 4523 * 3801 5391 * 2457 6599 * 6770 82 0 * * * * 0 * 5130 0 1000 P 83 2992 * 4768 3590 * 6634 * 5625 3782 4265 5161 7086 2142 4904 4814 3980 4646 2596 * * 83 0 * * * * * * 5127 0 0 K 84 6345 * 3701 4938 * 7025 * * 1322 * * * 5895 4851 1737 3787 4853 6383 * * 84 0 * * * * * * 5127 0 0 D 85 * * 83 * * * * * * * * 4159 * * * * * * * * 85 101 3889 * 0 * * * 5127 1986 0 I 86 6167 * * * 4282 * * 1725 * 3335 1541 * * * * 6752 3477 3467 * * 86 35 5381 * 0 * * * 5130 1245 0 Q 87 3234 6426 7068 4063 * * 5609 6733 2236 3858 * 4841 * 1737 3472 6420 4477 6648 * 6380 87 0 * * * * * * 5130 0 0 L 88 6123 * 5665 * 3990 * * 5671 * 261 5459 * * * * * 5243 * * * 88 0 * * * * * * 5041 0 0 A 89 1341 5869 * * * * 5321 3871 * 6576 2608 * * * * 5948 5117 2180 4798 5748 89 0 * * * * * * 5041 0 0 R 90 4078 * 7383 6142 * 6585 * 5184 3164 2740 3493 * * 4040 1548 6114 4887 3862 * 6272 90 31 5570 * 0 * * * 4966 1000 0 R 91 * 5577 6160 5306 4106 4924 6522 6662 3698 4883 6634 4008 * 4850 904 6645 * * * 3925 91 0 * * * * * * 4966 0 0 I 92 5948 6050 * * 5737 * * 989 * 1465 * * * 4005 * * * 5531 * * 92 36 6467 6236 1000 1000 * * 4794 1000 0 R 93 * * * * * 4390 * * 3308 4245 * 5662 * * 361 * * * * * 93 0 * * * * 0 * 4200 0 1000 G 94 * * * * * 299 * * 5335 * * 5196 * * 2890 * * * * * 94 0 * * * * * * 3645 0 0 E 95 * * 2261 1320 * * * 5314 3408 * * * * 3649 2382 * * * * * 95 0 * * * * * * 3425 0 0 R 96 * 3290 * * * * * * 2504 * * * * 2429 900 * * * * * 96 0 * * * * * * 2827 0 0 A 97 0 * * * * * * * * * * * * * * * * * * * 97 0 * * 0 * * * 1555 0 0 //