HHsearch 1.5 NAME c9d3kD_ FAM FILE c9d3kD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9d3kD_.a3m DATE Sat Aug 16 16:36:49 2025 LENG 90 match states, 90 columns in multiple alignment FILT 56 out of 58 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.2 EVD 0.3679 -2.5623 SEQ >ss_pred CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 961788999999986778773799999999999999999999999999970767767899999999975799999999999999984229 >Consensus kxsyxxYixkvLKqVhpdxxiSxkamximnSfvxDiferIAxEAsxlaxxxkrxTitxreIqtAvxllLPgeLakxAvxegtkAvxxxxs >c9d3kD_ KESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS >UniRef50_Q54BC2(17-102:226) Histone H2B.v1 n=1 Tax=Dictyostelium discoideum RepID=H2BV1_DICDI E=8e-19 s/c=1.10 id=38% cov=97% ----GIYIKKLIKQINPACRIQVKSVQILTSLIRDTTISIMNEAFHLVQLSNKRTLSARDVQTSVRLCTVGEISRHAVSEGVKRVTNFNS >UniRef50_UPI0000EBE7A7(79-166:168) PREDICTED: similar to H2B histone family, member W, testis-specific n=6 Tax=Bos taurus RepID=UPI0000EBE7A7 E=6e-26 s/c=1.34 id=48% cov=98% ---FATYFPRVLRQIHKGMSLSRDSVNILDSFVKDMFERIAEEAGRLARNNKRRTITHEDIEAAVRLLLPGDLCKYAINVATKSLIGYHT >UniRef50_Q7KWR7(2-80:474) Histone H2B.v2 n=1 Tax=Dictyostelium discoideum RepID=H2BV2_DICDI E=8e-11 s/c=0.86 id=26% cov=89% -ESYSPSIQKLCVFLKPESDISNTGISYLNNFLADMSNAIIVESIHSSKSHKHKTILIEDIESALNVVFPSEIADSIINQ---------- >UniRef50_A4I7E8(179-267:278) Histone H2B n=9 Tax=Trypanosomatidae RepID=A4I7E8_LEIIN E=3e-24 s/c=1.26 id=47% cov=100% -QHWDLYIHRALRRFFKRGTLSKAAVRVLSSFIEDMFNRIQTEAVFVAKINKVKTLTAREIQTSARLLLPPELAKHAMSEGTKAVAKYNA >UniRef50_B0DVY0(43-113:114) Predicted protein (Fragment) n=3 Tax=Laccaria bicolor S238N-H82 RepID=B0DVY0_LACBS E=1e-13 s/c=1.09 id=46% cov=79% EESYSSYIY---KGVHPDTGISKKAMAILKSFVNNIFKHIATEPSSTCHVGLRLSHSVFMLITSINFVLQDQI----------------- >UniRef50_B7XI58(40-128:133) tRNA and rRNA cytosine-C5-methylase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XI58_ENTBH E=6e-12 s/c=0.81 id=27% cov=98% ---FKSAIKKCLKESVPDgtVTITRNSLAVLCGIAQSILEDASVLSAELAQKVNKKTIGGEEVITAFELMLTGELKKLCVREIKNTLSKMNT >UniRef50_Q28GH7(28-92:98) Novel protein n=3 Tax=Xenopus (Silurana) tropicalis RepID=Q28GH7_XENTR E=6e-11 s/c=1.05 id=47% cov=71% KGRYSSFIYRVLKQ---NQRKSSFASLSKESTGKETCLCIADEAARLSLYNKRKTITCQEIQSAVK------------------------ >UniRef50_Q2HW83(21-101:109) Histone H2B; Histone-fold n=1 Tax=Medicago truncatula RepID=Q2HW83_MEDTR E=4e-13 s/c=0.93 id=30% cov=91% ---WQLELTNIRKQVCPDLKLQLGGMKMMDSMVNYFMKKLIAEA---TKHVDSNCLDVREIMAAVYQVFPEQLAKNAHQRGLEAVNQ--- >UniRef50_C4V8I2(38-124:137) Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V8I2_NOSCE E=6e-13 s/c=0.86 id=29% cov=87% ---FKSAIKKIAKDINPDQTvfLTSQAIAILCAIAYDIVSTCGEVASEFSKKVSKQTVGADEIVAAFEILLKGELKKLALRE---------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * 2166 * * * * 471 * * * * * 4163 * * * * * 1 0 * * * * * * 2971 0 0 E 2 * * 2852 1250 * 2693 * 4882 4413 * * 4230 * 4291 3305 * * * * * 2 0 * * * * * * 3846 0 0 S 3 * * 4454 5300 * 4410 3837 * * * * 3570 * 5007 4261 989 2828 * * * 3 0 * * * * * * 3848 0 0 Y 4 * * * * 1572 * * * * 5508 * * * * * * * * 2922 972 4 0 * * * * * * 4312 0 0 S 5 2611 * 4859 * 5176 3484 * * 2544 * * 3784 * 4401 3502 1783 6090 * * * 5 0 * * * * * * 4374 0 0 V 6 5823 * * * * * 6060 2569 * 2481 6633 4289 3998 * 4156 2184 3234 3141 * * 6 0 * * * * * * 4374 0 0 Y 7 3190 * * 4401 4194 * * * * 6060 * * * * * 4384 * * * 463 7 0 * * * * * * 4374 0 0 V 8 * * * * 3365 * * 901 * 3505 5599 * * * 5633 4866 5501 2457 * * 8 0 * * * * * * 4427 0 0 Y 9 * * * * 4688 * 3818 5742 2608 * * 3819 3150 4392 5215 4524 3991 * 5210 1661 9 55 * 4747 * * * * 4427 0 0 K 10 5537 * * * * * * * 976 * * 4480 * 5940 1359 * * * * 5696 10 18 * 6356 * * * 0 4363 0 1000 V 11 4889 4805 * * * 5305 * 2243 * 3008 * * * * * 3949 5704 1042 * * 11 0 * * * * * 0 4367 0 1428 L 12 4686 4430 * * * * * 3311 * 504 6102 * * 5986 4463 4920 * * * * 12 0 * * * * 980 1021 4367 0 1428 K 13 * * * * * * * * 322 * * * * * 3222 5745 5215 4407 * * 13 24 5914 * 2585 263 * 0 4428 1000 1000 Q 14 5483 * 4243 2668 4407 4727 * * 6014 4157 * 6002 * 967 4520 4636 * * * * 14 75 * 4301 * * 0 * 4428 0 1000 V 15 5891 * * * 4915 * * 1846 * 4424 6047 * * * * 4819 * 799 * * 15 0 * * * * * 0 4361 0 1302 H 16 * 4494 5306 4829 4245 * 1035 5399 4424 * * 3112 * * 5145 4922 5960 4034 * 5051 16 0 * * * * * 0 4361 0 1302 P 17 * * * 4648 * * 5051 * 4048 5589 * 5631 538 4986 * 5345 4265 4987 * * 17 0 * * * * 862 1152 4361 0 1302 D 18 5060 * 1054 2859 5031 2846 4571 * * * * 3663 6011 * 4930 6436 * * * * 18 51 4842 * 1000 1000 * 0 4413 1000 1000 T 19 * 5060 * * 6014 4930 * 3879 5198 2138 3880 4951 * 3438 5358 4397 1842 4158 * * 19 0 * * * * * 0 4413 0 1000 G 20 * * 4408 * * 1212 * 5056 4555 * * 4398 * * 3446 2491 2926 * * * 20 78 4245 * 2437 295 * 0 4414 1543 1000 I 21 6230 * * * 5603 * * 793 4980 1782 4577 * * * * * * 5333 * * 21 47 4961 * 1000 1000 0 * 4414 1000 1000 S 22 * * 6131 * * * * * * * * * * 3834 * 474 2428 * 6683 * 22 0 * * * * * * 4426 0 0 S 23 5501 6683 * 5140 * 3586 6149 * 2792 4005 * 3995 5985 3905 3788 1501 6054 5137 * 5544 23 0 * * * * * * 4426 0 0 K 24 4941 * 4638 5097 5052 4583 6234 * 1214 * 5611 3917 5605 3162 3438 * 4419 * * 5389 24 0 * * * * * * 4426 0 0 A 25 1086 * * 5674 * 3075 * * * 5140 * * * * * 1990 3299 6800 * * 25 21 * 6131 * * * * 4426 0 0 M 26 * * * * * * * 2573 * 3441 1118 * * 5664 * 4071 4798 2610 * * 26 0 * * * * 0 * 4424 0 1000 G 27 3221 * 3933 3714 * 3450 5080 6706 3610 4098 5297 3794 * 3739 4033 2364 4881 5763 * * 27 0 * * * * * * 4460 0 0 I 28 * * * * 6055 * 5080 1059 * * 4586 6650 * * * 3766 * 1714 * 4459 28 0 * * * * * * 4460 0 0 M 29 * * * * * * 5732 6756 5010 1559 1188 * * * * * 5095 3654 * 4208 29 0 * * * * * * 4460 0 0 N 30 * 3277 2189 5010 * * * 4369 4313 * * 1073 * * * 4545 5077 * * * 30 0 * * * * * * 4460 0 0 S 31 4747 * * * * 3701 * 5363 * * 4623 3779 5080 * * 588 4228 * * * 31 27 * 5732 * * * * 4460 0 0 F 32 * * * * 882 * * 3265 * 2504 3037 * * * * * 4943 * * 5465 32 0 * * * * * 0 4453 0 1000 V 33 3819 * * * * 4964 * 2328 4926 3486 3081 * * * * 4980 * 1231 * * 33 0 * * * * 0 * 4446 0 1000 N 34 3831 * * 5027 * 6241 4576 * 2963 * * 1206 * 4221 3829 4454 * 5165 * 3561 34 0 * * * * * * 4457 0 0 D 35 * * 503 4021 * 5180 5165 * * * * 4134 * * * 4188 * * * 3929 35 0 * * * * * * 4457 0 0 I 36 * * * * 3842 * * 1112 * 3694 2359 5165 * 5618 * * 3325 4400 * * 36 0 * * * * * * 4457 0 0 F 37 * 5038 * * 662 * * * * 3156 3631 * * * * 4445 5088 3850 * * 37 0 * * * * * * 4452 0 0 E 38 * * 3413 999 * 5029 5232 5088 3392 5038 * 3445 * 4369 * 4741 * * * 5974 38 0 * * * * * * 4452 0 0 R 39 4445 4280 4890 * * * 4795 5232 3524 * * 5191 * 5080 881 4317 3850 * * * 39 0 * * * * * * 4452 0 0 I 40 4890 4741 * * * * * 488 * 2575 * * 5974 * * * * 4968 * * 40 0 * * * * * * 4452 0 0 A 41 479 * * * * 4741 * 3389 * * 5088 * * 5011 * 4890 5974 4650 * * 41 21 * 6099 * * * * 4452 0 0 G 42 3389 5252 2850 2802 * 3697 * * 4524 * 4544 5070 * 4997 4793 3174 2876 3498 * * 42 0 * * * * * 0 4460 0 1000 E 43 * * 5010 288 * * * * 4419 3924 * * * * * * * 4739 * * 43 0 * * * * * 0 4460 0 1000 A 44 292 * * 6130 * * * * * * * * 4676 * * 3185 5648 * * * 44 62 * 4574 * * * 0 4329 0 1000 S 45 1946 5214 * * 4708 2979 * 4325 * * * 5860 * * * 1150 * 5032 * * 45 0 * * * * * 0 4202 0 1578 R 46 * * * 3242 4000 5813 3257 5130 4361 4873 * 3974 * 4080 1561 3087 5737 * * * 46 0 * * * * * 0 4202 0 1578 L 47 * * * * 4729 * * 4267 * 513 4578 * * 5214 * 4325 4588 4342 * * 47 0 * * * * 816 1212 4202 0 1578 A 48 1190 3929 * * * 5355 * * * 4517 4217 * * * * 2483 3393 3320 * * 48 0 * * * * * 0 4329 0 1000 H 49 * 4658 6258 * 5241 6226 2618 * 1738 4247 * * 8192 2550 2494 5652 * * * 5599 49 16 * 6499 * * * 0 4329 0 1000 Y 50 4010 * 6205 * * * 3659 4323 2796 3373 * 4886 * 5046 * 3769 * 4115 * 1476 50 0 * * * * * 0 4336 0 1446 N 51 4145 * * * * 4669 3488 * 3928 * * 1851 * * 5230 2730 2975 2790 * 5439 51 0 * * * * * 0 4336 0 1446 K 52 * * 4561 * * 3381 5863 * 1085 4669 * 3005 * 5439 3114 3820 * * * * 52 0 * * * * * 0 4336 0 1446 R 53 * * * * * * 3141 * 1640 * * 6077 * 5657 1174 4117 * 5049 * * 53 0 * * * * 0 * 4339 0 1446 S 54 * 5360 * * * 5304 * * 2341 3069 6307 4083 6938 3574 2909 2115 3614 5361 * * 54 0 * * * * * * 4332 0 0 T 55 * 4624 * * * 5639 * 6091 * * * * * * * 4726 173 * * * 55 0 * * * * * * 4333 0 0 I 56 * * * * * * 4727 1242 * 1231 5217 * * * 5697 * * 3892 * * 56 0 * * * * * * 4333 0 0 T 57 5217 * 4190 * * 2458 5906 5943 * 4431 * 6124 * 5395 * 2355 1240 * * * 57 0 * * * * * * 4333 0 0 S 58 2353 5148 * * 5933 4897 4888 3834 4560 6007 * * 4490 * * 1401 4810 3245 * * 58 0 * * * * * * 4333 0 0 R 59 * * 3892 3271 4727 3987 5943 * 3835 * * 5217 * 4278 890 * * * 5395 * 59 0 * * * * * * 4333 0 0 E 60 5406 * 1877 712 * * * * * * 4706 * 4780 * * * * 5710 * * 60 0 * * * * * * 4313 0 0 I 61 * * * * * * * 545 * 3148 * * * * * * * 2308 * * 61 0 * * * * * * 4313 0 0 Q 62 * * * 2731 * * * 3262 5174 * 4599 6210 * 674 * * * 4801 * * 62 0 * * * * * * 4265 0 0 T 63 2630 * 5845 5410 * 5214 7379 * * * 4716 * * 4479 * 2181 1226 4894 * * 63 0 * * * * * * 4265 0 0 A 64 295 * * 5640 * 5754 * * * * * * 7379 * * 3039 5718 * * * 64 0 * * * * * * 4265 0 0 V 65 4268 * * * 3284 * * 3704 * 4322 4693 * * * * * 5479 605 * * 65 0 * * * * * * 4211 0 0 R 66 * 5638 5292 3284 * * 3145 * 2704 * * 3538 * * 1210 * * * * 3903 66 0 * * * * * * 4211 0 0 L 67 * * * * 4240 * 5649 3533 5242 521 * * * 4531 5412 * * 4296 * * 67 0 * * * * * * 4142 0 0 L 68 * 4802 * * 5426 * 5649 4133 * 1200 4278 * * * * * 5777 1478 * * 68 0 * * * * * * 4142 0 0 L 69 * * * * 3247 * * 5370 * 296 * * * * * * 4802 5649 * * 69 0 * * * * * * 4142 0 0 P 70 5426 * * * * * * * 3441 * * * 402 4746 * * 4198 4802 * * 70 0 * * * * * * 4142 0 0 G 71 4916 * 4041 4531 * 639 4922 * 5146 * * * 4311 * 5169 3622 * * * * 71 0 * * * * * * 4142 0 0 E 72 * * 2835 636 * 5538 * * 3668 * * * * 3107 * * * * * * 72 0 * * * * * * 4121 0 0 L 73 * * * * * * * 2422 * 363 4793 * * * * * * * * * 73 0 * * * * * * 4075 0 0 A 74 957 4143 * * * 2723 * * 3601 4869 * 5215 * 4646 4777 4136 * * * * 74 0 * * * * * * 4007 0 0 K 75 * * 4308 4869 * * * * 499 * * 5993 * 5574 3033 * 5058 * 5750 * 75 0 * * * * * * 4007 0 0 H 76 * * * * * * 986 * * 2239 * 3592 * * 4666 4308 * * * 3181 76 0 * * * * * * 4007 0 0 A 77 231 4425 * * * * * 3703 * * * * * * * * * 5342 * * 77 0 * * * * * * 4007 0 0 V 78 5750 * 4869 4770 * * 4392 2321 * 4801 3516 * * * 5249 * 5096 1047 * * 78 0 * * * * * * 4007 0 0 S 79 2083 * 5249 * * * * * * 4330 * 3566 * 4392 2707 1424 5058 * * * 79 0 * * * * * * 4007 0 0 E 80 * * 4869 675 4125 * 5096 * 4119 * * * * 3213 3828 * * 5861 * * 80 0 * * * * * * 4007 0 0 G 81 3209 * * * * 340 * 4194 * * * * * * * * * 4400 * * 81 0 * * * * * * 3784 0 0 T 82 * * 3871 * * * 4400 * 4194 3771 5434 4954 * 5084 * 2884 1028 4449 * * 82 0 * * * * * * 3784 0 0 K 83 * * * 3669 * * * * 754 * 4518 2830 * 5364 3895 5084 5434 * * * 83 0 * * * * * * 3784 0 0 A 84 229 * * * * * * * * * * * * * 4449 4432 4194 * * * 84 0 * * * * * * 3784 0 0 V 85 4694 * * * 4409 * * 3787 * 2264 4518 * * * * * * 761 * * 85 31 * 5560 * * * * 3784 0 0 T 86 3984 * * 4908 * * 3820 3551 5069 4675 6220 3698 * * * 1790 1972 4514 * * 86 0 * * * * 0 * 3814 0 1000 K 87 * * * * * 5746 5536 * 1247 * 5364 2508 5406 4255 2419 * 4352 * 5252 * 87 0 * * * * * * 3784 0 0 Y 88 5145 * * * 1500 * * * * * 3626 * * * * * * * * 896 88 0 * * * * * * 3482 0 0 T 89 * * * 4429 * * 5273 3420 3199 5342 3807 2021 * * 5171 4593 1673 * * * 89 0 * * * * * * 3474 0 0 S 90 3310 * * * * * * * * * * * * * * 619 2012 * * * 90 0 * * 0 * * * 3322 0 0 //