HHsearch 1.5 NAME c9bw7D_ FAM FILE c9bw7D_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9bw7D_.a3m DATE Sat Feb 8 09:27:25 2025 LENG 136 match states, 136 columns in multiple alignment FILT 6 out of 8 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.1 EVD 0.3943 -0.9420 SEQ >ss_pred CCCHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH HHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCC >ss_conf 9428988742313671878785268999999973178864668999999999999999999965311310058864568999999999961266863134 432177633666555245898755413677631389 >Consensus xvxxxxxxxlqxxdGyWxxlnxdvdxlnxfLxxxGIqSLGxkxxxxiLkLlaTllVlqxirxxxxxexivxxdxxxaxexikrAxeWvrxtdxQYPxicx RLElGxdWesaTrqlLgxxxxxxxSpLxxvlxxxxx >c9bw7D_ AVPWTELLSLQTEDGFWLILNLNTNGLHSFLKQKGIQSLGVKGRECLLDLIATMLVLQFIRTRLEKEGIMKMDIPWAFEAIKQASEWVRRTEGQYPSICP RLELGNDWDSATKQLLGLQPISTVSPLHRVLHYSQG >UniRef50_UPI0001A2D0B8(184-321:326) hypothetical LOC558045 (LOC558045), mRNA n=1 Tax=Danio rerio RepID=UPI0001A2D0B8 E=6e-13 s/c=0.54 id=49% cov=87% ------------KDGYWectgrmsRFFNLDVDFFANiFLKEKGIQSLGVKAHADILRLLATLLVLQLIRVkKLEVgrllESLLRLKesqeprlMYW--EA VKRAVDWACQTDRQYPCVCSRLEIGRDWESSTRQLLGCDSPHPYSPLKPVL----- >UniRef50_Q4RTR8(1224-1391:1406) Chromosome 2 SCAF14997, whole genome shotgun sequence n=3 Tax=Tetraodon nigroviridis RepID=Q4RTR8_TETNG E=3e-33 s/c=0.85 id=43% cov=92% ---FTSFVAVEERDGYWeltpelgKLLNFDVDlFVNVFLKSKGIDSLGARARADILRLLATLLVLQLMRVAKLEEGRLlrtlfslvdpsqqrwersrnRA GRPPAgadaslyhvtpsrsrgGEQVKRAVDWVRWADRQYPCICSRLEFGLSWESSTRQLLGFEDAHRSSPL--------- >UniRef50_UPI000180BF36(2165-2247:2278) PREDICTED: similar to poly (ADP-ribose) polymerase family, member 4 n=1 Tax=Ciona intestinalis RepID=UPI000180BF36 E=1e-05 s/c=0.62 id=28% cov=58% -----------------------------WLVEAGVRSLGKRIYSMVLKMLFTAFVNGILEELLQSDPVVTAD----SKLLEDAKLWLKQTDSKYPGLYA RLELGASWPKA------------------------- >UniRef50_UPI0000ECD6E7(1552-1689:1691) Poly [ADP-ribose] polymerase 4 (EC 2.4.2.30) (PARP-4) (Vault poly(ADP- ribose) polymerase) (VPARP) (193 kDa vault protein) (PARP- related/IalphaI-related H5/proline-rich) (PH5P). n=5 Tax=Tetrapoda RepID=UPI0000ECD6E7 E=1e-40 s/c=1.21 id=59% cov=88% -VMWEEIFDLQNQDGSWnlspqlgKILKFDVDYLiNHFLIRNGIQSLGIKGKEKLLKLIATLLVLQFIRCANELQGIVfkslmkldnlttSSGVHWAFES IKKATEWVKRVEGQFPSICYRLELGKDWDSATKMILGIK----------------- >UniRef50_Q0V9D1(180-323:330) LOC779481 protein (Fragment) n=2 Tax=Xenopus (Silurana) tropicalis RepID=Q0V9D1_XENTR E=2e-43 s/c=1.17 id=46% cov=93% ---FSLLSALQCEEGYWQlnealgsLINIDVNYLcNEFLVKNGIQSLGSKGKEEVPKLIATLLVLQVIRTNNlqgiKCKSLVSLDEPSGtsqfHQATERA MEWVRKRDSQYPGICNRLGLGKDWESATRKLLSIDPVDPSSDLY-------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 V 2 * * * * * * * * * * * * * * * * * 0 * * 2 0 * * * * * * 1326 0 0 P 3 * * * * * * * * * * 1000 * 1000 * * * * * * * 3 0 * * * * * * 1326 0 0 W 4 * * * * 915 * * * * * * * * * * * * * 1090 * 4 0 * * * * * * 1914 0 0 T 5 * * * 2090 * * * * * * * * * * * 1963 975 * * * 5 0 * * * * * * 1914 0 0 E 6 * * * 1090 * * * * * 1963 * * * * * 1869 * * * * 6 0 * * * * * * 1914 0 0 L 7 * * * * 1869 * * 2090 * 1025 * * * * * * * * * * 7 0 * * * * * * 1914 0 0 L 8 * * * * 2090 * * * * 2090 * * * * * 1963 * 1869 * * 8 0 * * * * * * 1914 0 0 S 9 915 * 2090 * * * * * * * * * * * * 2090 * * * * 9 0 * * * * * * 1914 0 0 L 10 * * * * * * * * * 461 * * * * * * * 1869 * * 10 0 * * * * * * 1914 0 0 Q 11 * * * 1869 * * * * * * * * * 461 * * * * * * 11 0 * * * * * * 1914 0 0 T 12 * 1963 * 1869 * * * * * * * 2090 * * * * 2090 * * * 12 0 * * * * * * 1914 0 0 E 13 * * * 1283 * * * * 2394 * * * * 2331 2322 * * * * * 13 0 * * * * * * 1961 0 0 D 14 * * 353 2206 * * * * * * * * * * * * * * * * 14 0 * * * * * * 1961 0 0 G 15 * * * * * 0 * * * * * * * * * * * * * * 15 0 * * * * * * 1961 0 0 F 16 * * * * 2364 * * * * * * * * * * 2331 * * * 720 16 0 * * * * * * 1961 0 0 W 17 * * * * * * * * * * * * * * * * * * 0 * 17 1283 764 * 2807 222 * * 1961 1633 0 L 18 * * * * * * * * 1327 2364 * * * 2206 2394 * * * * * 18 353 2206 * 2807 222 * * 1961 1000 0 I 19 * * * * 2394 * * 1348 * 1263 * * * * * * * * * * 19 0 * * * * * * 1961 0 0 L 20 * * * * 2394 * * 2206 * 754 * * * * * * * * * * 20 0 * * * * * * 1961 0 0 N 21 * * * * * * * * 2331 * * 320 * * * * * * * * 21 0 * * * * * * 1961 0 0 L 22 * * * * 1327 * * 2206 * 1379 * * * * * * * * * * 22 0 * * * * * * 1961 0 0 N 23 * * 312 * * * * * * * * 2364 * * * * * * * * 23 0 * * * * * * 1961 0 0 T 24 * * * * * * * * * * * * * * * * 2364 312 * * 24 0 * * * * * * 1961 0 0 N 25 * * 764 * * * * * * * * 1283 * * * * * * * * 25 322 2322 * 0 * * * 1961 1000 0 G 26 * * * * 1358 2364 * * * * * * * * * * * * * 1267 26 0 * * * * * * 1961 0 0 L 27 * * * * 2394 * * * * 714 * * * * * * * 2322 * * 27 775 1267 * 0 * * * 1961 1423 0 H 28 2394 * * * * * 2364 * * * * 700 * * * * * * * * 28 0 * * * * * * 1961 0 0 S 29 * * * 2206 * * 2331 * * * * 2394 * * * 2364 * 2322 * * 29 305 2394 * 0 * * * 1961 1000 0 F 30 * * * * 385 * * * * * * * * * * * * * 2094 * 30 0 * * * * * * 2302 0 0 L 31 * * * * * * * * * 0 * * * * * * * * * * 31 0 * * * * * * 2302 0 0 K 32 * * * * * * * 2702 1160 * * * * * * * * 1326 * * 32 0 * * * * * * 2302 0 0 Q 33 * * * 1401 * * * * 2604 * * * * 2793 2702 2655 * * * * 33 0 * * * * * * 2302 0 0 K 34 2094 * * * * * * * 1160 * * 1652 * * * * * * * * 34 0 * * * * * * 2302 0 0 G 35 * * * * * 0 * * * * * * * * * * * * * * 35 0 * * * * * * 2302 0 0 I 36 * * * * * * * 385 * * * * * * * * * 2094 * * 36 0 * * * * * * 2302 0 0 Q 37 * * 2655 * * * * * * * * * * 720 2094 * * * * * 37 0 * * * * * * 2302 0 0 S 38 * * * * * * * * * * * * * * * 0 * * * * 38 0 * * * * * * 2302 0 0 L 39 * * * * * * * * * 0 * * * * * * * * * * 39 0 * * * * * * 2302 0 0 G 40 * * * * * 0 * * * * * * * * * * * * * * 40 0 * * * * * * 2302 0 0 V 41 2655 * * * * * * 2702 2094 * * * * * * 2604 * 1792 * * 41 0 * * * * * * 2302 0 0 K 42 * * * * * * * * 720 * * * * * 1347 * * * * * 42 0 * * * * * * 2302 0 0 G 43 1722 * * * * 1112 * 2094 * * * * * * * * * * * * 43 0 * * * * * * 2302 0 0 R 44 * * * * * * 2791 * 1652 * * * * * 1723 * * * * 2094 44 0 * * * * * * 2302 0 0 E 45 1722 * * 1112 * * * * * * * * * * * 2094 * * * * 45 0 * * * * * * 2302 0 0 C 46 * 2793 1722 2604 * * * * 2702 * 2094 * * * * * * * * * 46 0 * * * * * * 2302 0 0 L 47 * * * * * * * 1722 * 1747 * * * * * * * 1326 * * 47 0 * * * * * * 2302 0 0 L 48 * * * * * * * * * 259 * * 2604 * * * * * * * 48 0 * * * * * * 2302 0 0 D 49 * * 2793 * * * * * 856 * * * * * 1722 * * * * * 49 0 * * * * * * 2302 0 0 L 50 * * * * * * * * * 385 2094 * * * * * * * * * 50 0 * * * * * * 2302 0 0 I 51 * * * * * * * 1112 * 896 * * * * * * * * * * 51 0 * * * * * * 2302 0 0 A 52 385 * * * 2094 * * * * * * * * * * * * * * * 52 0 * * * * * * 2302 0 0 T 53 * * * * * * * * * * * * * * * * 0 * * * 53 0 * * * * * * 2302 0 0 M 54 2094 * * * * * * * * 686 2793 * * * * * * * * * 54 0 * * * * * * 2302 0 0 L 55 * * * * 2094 * * * * 385 * * * * * * * * * * 55 0 * * * * * * 2302 0 0 V 56 * * * * * * * * * * * * * * * * * 0 * * 56 0 * * * * * * 2302 0 0 L 57 * * * * * * * * * 385 * 2094 * * * * * * * * 57 0 * * * * * * 2302 0 0 Q 58 * * * * * 2094 * * * * * * * 385 * * * * * * 58 0 * * * * * * 2302 0 0 F 59 * * * * 1747 * * 2094 * 1722 * * * * * * * 2604 * * 59 0 * * * * * * 2302 0 0 I 60 * * * * * * * 720 * 2094 2655 * * * * * * * * * 60 0 * * * * * * 2302 0 0 R 61 * * * 2094 * * * * * * * * * * 385 * * * * * 61 0 * * * * * * 2302 0 0 T 62 * 2702 * 2094 * * * * * * * * * * * * 1695 1722 * * 62 225 2791 * 0 * * * 2302 1000 0 R 63 1678 * * * * * * * 2791 2094 * 2604 * * 2793 * * * * * 63 0 * * * * * * 2302 0 0 L 64 * * * * * * * * 2655 935 * 1652 * * * * * * * * 64 259 2604 * 2000 415 * * 2302 1000 0 E 65 * * * 1176 * * * * 2604 2655 * * * 2094 * * * * * * 65 0 * * * * * * 2302 0 0 K 66 * 2604 * 2655 * * * * 2793 2702 * * * * * 2094 * 2791 * * 66 225 2791 * 2000 415 * * 2302 1000 0 E 67 * * 2094 1160 * * * * 2604 * * * * 2702 * * * * * * 67 0 * * * * * * 2302 0 0 G 68 * * * * * 1131 * * * * * * 2094 * * 1694 * * * * 68 0 * * * * * * 2302 0 0 I 69 * * * * * * * 1747 * 1694 * * * * 2655 * * 2094 * * 69 0 * * * * * * 2302 0 0 M 70 * * * * * * * * * 1722 2793 * * * * * * 856 * * 70 540 1678 * 3999 93 * * 2302 1492 0 K 71 * * * * * * * * 2793 * * * * * 1722 1652 2094 * * * 71 0 * * * * * * 2302 0 0 M 72 1347 * * * * * * * * 1694 2793 * * * * 2702 * * * * 72 0 * * * * * * 2302 0 0 D 73 * * 881 * * 1678 * * 2791 * * * * * * * * * * * 73 687 2791 2094 2807 222 * * 2302 1000 0 I 74 * * * 2206 * * * 2364 * * 2394 * * * 2322 * * 2331 * * 74 0 * * * * * 0 1961 0 1000 P 75 * * * * * * 2331 * * * * * 711 * * * * * * 2394 75 0 * * * * * 0 1961 0 1000 W 76 * * * * * * * * * * * * 2322 * * 2206 * * 778 * 76 305 * 2394 * * * 0 1961 0 1000 A 77 428 * * * * 1963 * * * * * * * * * * * * * * 77 1090 915 * 3301 154 1036 965 1914 1504 1587 F 78 * * * * 1539 2242 2402 * * * * * * * * 1970 * * * * 78 0 * * * * 0 * 2243 0 1000 E 79 * * * 734 * * * * 2094 * * * * 2604 * * * * * * 79 0 * * * * * * 2302 0 0 A 80 1142 * * * * * * * * 2094 * * * 2655 * 2702 * * * * 80 0 * * * * * * 2302 0 0 I 81 * * * * * * * 1747 * 2094 * * * * * * 2604 1722 * * 81 0 * * * * * * 2302 0 0 K 82 * * * 1326 * * * * 734 * * * * * * * * * * * 82 0 * * * * * * 2302 0 0 Q 83 * * 2094 * * * * * 2702 * * * * 2793 1096 * * * * * 83 0 * * * * * * 2302 0 0 A 84 0 * * * * * * * * * * * * * * * * * * * 84 0 * * * * * * 2302 0 0 S 85 * * * * * * * * 2094 * 2604 * * * * 2793 2702 1722 * * 85 0 * * * * * * 2302 0 0 E 86 * * 1722 1112 * * * * * 2094 * * * * * * * * * * 86 0 * * * * * * 2302 0 0 W 87 * * * * * * * * * * * * * * * * * * 0 * 87 0 * * * * * * 2302 0 0 V 88 2791 * * * * * * * * 2094 * * * * * * * 687 * * 88 0 * * * * * * 2302 0 0 R 89 * 2791 * * * * * * 1366 * * * * * 1097 * * * * * 89 0 * * * * * * 2302 0 0 R 90 * * * * * * * * 2604 * * * * 1401 1747 * * * 2655 * 90 0 * * * * * * 2302 0 0 T 91 2655 * * * * * * * * * * * * * 2604 * 935 2702 * * 91 0 * * * * * * 2302 0 0 E 92 * * 510 1747 * * * * * * * * * * * * * * * * 92 0 * * * * * * 2302 0 0 G 93 * * * * * 1747 * * * * * * * * 1722 1326 * * * * 93 0 * * * * * * 2302 0 0 Q 94 * * * * * * * * 2094 * * * * 385 * * * * * * 94 0 * * * * * * 2302 0 0 Y 95 * * * * 2702 * * * * * * * * * * * * * * 241 95 0 * * * * * * 2302 0 0 P 96 * * * * * * * * * * * * 0 * * * * * * * 96 0 * * * * * * 2302 0 0 S 97 * 1722 * * * 1326 * * * * * * * * * 1747 * * * * 97 0 * * * * * * 2302 0 0 I 98 * * * * * * * 687 * 2094 * * * * * * * 2791 * * 98 0 * * * * * * 2302 0 0 C 99 * 385 * * * * * * * * * * * * * * * * * 2094 99 0 * * * * * * 2302 0 0 P 100 2094 * * * * * * * * * * 2604 2793 * * 1722 * * * 2702 100 0 * * * * * * 2302 0 0 R 101 * * * * * * * * * * * * * * 0 * * * * * 101 0 * * * * * * 2302 0 0 L 102 * * * * * * * * * 0 * * * * * * * * * * 102 0 * * * * * * 2302 0 0 E 103 * * * 259 * 2604 * * * * * * * * * * * * * * 103 0 * * * * * * 2302 0 0 L 104 * * * * 2655 * * 2791 * 521 * * * * * * * * * * 104 0 * * * * * * 2302 0 0 G 105 * * * * * 0 * * * * * * * * * * * * * * 105 0 * * * * * * 2302 0 0 N 106 2094 * * * * * * * 1652 2655 * 2793 * * 2791 * * * * * 106 0 * * * * * * 2302 0 0 D 107 * * 720 * * * * * * * * * * * * 1347 * * * * 107 0 * * * * * * 2302 0 0 W 108 * * * * * * * * * * * * * * * * * * 0 * 108 0 * * * * * * 2302 0 0 D 109 * * 1747 1096 * * * * * * * * 2094 * * * * * * * 109 0 * * * * * * 2302 0 0 S 110 * * * * * * * * 2094 * * * * * * 385 * * * * 110 0 * * * * * * 2302 0 0 A 111 521 * * * * * * * * * * * * * * 1722 * * * * 111 0 * * * * * * 2302 0 0 T 112 * * * * * * * * * * * * * * * * 0 * * * 112 0 * * * * * * 1961 0 0 K 113 * * * * * * * * 1348 * * * * * 720 * * * * * 113 0 * * * * * * 1961 0 0 Q 114 * * * * * * * * 2206 * 2331 * * 775 * * * * * * 114 0 * * * * * * 1961 0 0 L 115 * * * * * * * 2331 * 320 * * * * * * * * * * 115 0 * * * * * * 1961 0 0 L 116 * * * * * * * * * 0 * * * * * * * * * * 116 0 * * * * * * 1961 0 0 G 117 * * * * * 353 * * * * * * * * * 2206 * * * * 117 0 * * * * * * 1961 0 0 L 118 * 2394 * * 2322 * * 1267 * 2364 * * * * * * * * * * 118 0 * * * * * * 1961 0 0 Q 119 * * 1296 2322 * * * * 2331 * * * * 2364 * * * * * * 119 0 * * * * * * 1961 0 0 P 120 * * 2042 * * * * * * * * * 917 * * 2136 * * * * 120 0 * * * * * * 1862 0 0 I 121 2042 * * * * * * 1951 * * * * 2136 * * * * 1884 * * 121 0 * * * * * * 1862 0 0 S 122 * * 1884 * * * 1088 * * * * * * * * 1951 * * * * 122 0 * * * * * * 1862 0 0 T 123 * * * * * * * * * * * * 1004 * 2042 * 1951 * * * 123 0 * * * * * * 1862 0 0 V 124 * * * * * * * * * * * * * * * 961 * 1951 * 2136 124 0 * * * * * * 1862 0 0 S 125 * * * * * * * * * * * * * * * 0 * * * * 125 0 * * * * * * 1862 0 0 P 126 * * 1884 * * * * * * * * * 456 * * * * * * * 126 0 * * * * * * 1862 0 0 L 127 * * * * * * * * * 0 * * * * * * * * * * 127 0 * * * * * * 1862 0 0 H 128 * * * * * * 1594 * 1604 * * * * * * * * * * 1557 128 0 * * * * * * 1714 0 0 R 129 * * * * * * * * * * * * 1024 * 976 * * * * * 129 0 * * * * * * 1410 0 0 V 130 * * * * * * * * * * * * * * * * * 0 * * 130 0 * * * * * * 1410 0 0 L 131 * * * * * * * * * 0 * * * * * * * * * * 131 0 * * * * * * 1410 0 0 H 132 * * * * * * 0 * * * * * * * * * * * * * 132 0 * * * * * * 1000 0 0 Y 133 * * * * * * * * * * * * * * * * * * * 0 133 0 * * * * * * 1000 0 0 S 134 * * * * * * * * * * * * * * * 0 * * * * 134 0 * * * * * * 1000 0 0 Q 135 * * * * * * * * * * * * * 0 * * * * * * 135 0 * * * * * * 1000 0 0 G 136 * * * * * 0 * * * * * * * * * * * * * * 136 0 * * 0 * * * 1000 0 0 //