HHsearch 1.5 NAME c9azsS_ FAM FILE c9azsS_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9azsS_.a3m DATE Sat May 3 13:21:27 2025 LENG 83 match states, 83 columns in multiple alignment FILT 28 out of 30 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.3 EVD 0.4161 0.2267 SEQ >ss_pred CCCHHHCCCCHHHHHHHHHHHHEEECCCEEEEEEEECCCCCCEEEEECCCCEEEECCCCCEEEEECCCCEEECCCCEEEECCC >ss_conf 96211018888998854343112006980379998088877017972776489955667434542485049427845875479 >Consensus xlxxDllxpxxxxexxxhKxkrLvxxPnSxFmxVkCxxCxnixivFShAxtxVxCxxCgxxLxxPTGGKaklxxxxxfxxxxx >c9azsS_ PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH >UniRef50_A4WLR8(7-59:67) 30S ribosomal protein S27e n=20 Tax=Archaea RepID=RS27_PYRAR E=2e-08 s/c=1.13 id=46% cov=65% --------------------KVLIPQPRSKFVKIRCPDCGNEQVTFSHAAMVVRCLVCGRVLAQPTGGKAKFA---------- >UniRef50_A0RY94(8-56:224) Ribosomal protein S27E n=1 Tax=Cenarchaeum symbiosum RepID=A0RY94_CENSY E=4e-07 s/c=1.14 id=40% cov=60% -----------------------VPEPTSRFVKIECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKAVL----------- >UniRef50_Q8SS34(1-79:85) 40S RIBOSOMAL PROTEIN S27 n=1 Tax=Encephalitozoon cuniculi RepID=Q8SS34_ENCCU E=2e-22 s/c=1.35 id=36% cov=96% -MASDLAFPTREKVGSTYKKDRLYREGNGFFMYVRCGGCRHTTCCYSHSQTNISCPGCGDIILTSSGGRAVVSPNCEFKK--- >UniRef50_Q3LW62(9-85:93) Ribosomal protein S27 n=1 Tax=Bigelowiella natans RepID=Q3LW62_BIGNA E=1e-21 s/c=1.34 id=44% cov=94% ----DLSNPSKKTEAKKHKLKRLIQSPNSHYIATKCLKCKKINIIFSHSVFWKTCVDCSTLLTRPSGGKFKSSKSMQIVKR-- >UniRef50_A9A5Z8(2-61:65) Ribosomal protein S27E n=2 Tax=marine archaeal group 1 RepID=A9A5Z8_NITMS E=1e-11 s/c=1.19 id=35% cov=72% ------------------KKDHVeIPKPSSKFQKVNCNECGELQIVYSHASTQVACNSCGNAIAEATGSKAKINGKVS------ >UniRef50_Q9HIX2(13-61:65) 30S ribosomal protein S27e n=4 Tax=Thermoplasmatales RepID=RS27_THEAC E=1e-07 s/c=1.18 id=33% cov=51% ---------------------------NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG--------------- >UniRef50_UPI0001C41C05(4-50:59) ribosomal protein S27e Rps27e n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41C05 E=4e-07 s/c=1.20 id=29% cov=58% -------------------------NGRGNFLRVKCLDCDNEQIIFDRAASDVKCIICGKTIVKSRGGKAKI----------- >UniRef50_A2DB88(4-83:86) Ribosomal protein S27 n=4 Tax=Trichomonas vaginalis RepID=A2DB88_TRIVA E=6e-22 s/c=1.31 id=41% cov=98% -LDVDILHPTVEQEAHTNKKMTLVPNPRSEFLSLRCPSCTGLTTAFSHSNVPVFCKNCQTPLATPTGGRILLADQVEIRPR-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 1490 0 0 L 2 * * * * * * * 3378 * 859 1505 * * * * * * * * * 2 0 * * * * * * 2522 0 0 A 3 1319 * 3003 2310 * * * * * * * 3519 * * * 4250 * 2909 * * 3 0 * * * * * * 2522 0 0 K 4 * * * * * * * * 2490 * * * * 3947 2662 2646 * 1186 * * 4 0 * * * * * * 2522 0 0 D 5 * * 0 * * * * * * * * * * * * * * * * * 5 0 * * * * * * 2632 0 0 L 6 * * * * 4253 * * 3160 * 259 * * * * * * * * * * 6 0 * * * * * * 2632 0 0 L 7 2861 * * * * * * 4796 * 475 * * * * * 3222 * * * * 7 0 * * * * * * 2667 0 0 H 8 * * * * 2861 * 1555 * * * * 1393 * 3722 * * * * * 3930 8 0 * * * * * * 2667 0 0 P 9 * * * * * * * * * * * * 114 * * * 3722 * * * 9 0 * * * * * * 2667 0 0 S 10 3722 * 3930 4148 * * * 3653 * 4397 * * 4562 * * 1874 1474 * * * 10 0 * * * * * * 2667 0 0 P 11 2086 * * * 4796 * * * 3222 * * * 1741 * 2861 * * 3251 * 3653 11 0 * * * * * * 2667 0 0 E 12 2409 * 4915 1020 * * * * 2564 * * * * 4219 * * * 3995 * * 12 0 * * * * * * 2824 0 0 E 13 * * * 1844 * * * * 2432 2776 * * * 3445 4219 2733 3410 * * * 13 0 * * * * * * 2824 0 0 E 14 * * * 296 * * * * 4299 * * * * * * * * 2894 * * 14 0 * * * * * * 2824 0 0 K 15 1572 * * * * 2894 * 4219 1978 * * * * 2861 3574 * * * * * 15 0 * * * * * * 2824 0 0 R 16 * * * * * * 3452 * 2321 * 3661 * * 3889 1214 2934 * * * * 16 0 * * * * * * 2840 0 0 K 17 3920 4305 * * * * 4438 * 843 * * * * 5398 4893 * 2170 * * * 17 68 * 4438 * * * * 2840 0 0 H 18 * * * * * * 516 * * * * 2615 * * * * * * * 2861 18 0 * * * * 0 * 2847 0 1000 K 19 * * * * * * * * 0 * * * * * * * * * * * 19 0 * * * * * * 2922 0 0 K 20 * * * * 3925 * * * 822 1708 4006 * * * * * * * * * 20 0 * * * * * * 2922 0 0 K 21 * * 2424 * * * * * 541 * 3796 * * * 4206 * * * * * 21 0 * * * * * * 3048 0 0 R 22 * * * * * * 2506 * * * * 4097 * * 802 * 2874 4173 * * 22 0 * * * * * * 3048 0 0 L 23 * * * * * * * 3943 * 223 * * * * * * * 3673 * * 23 118 3673 * 0 * * * 3048 1000 0 V 24 * * * * * * * 1449 * * * * * * * * * 924 * 3228 24 0 * * * * * * 3293 0 0 Q 25 * * * * * * * * * * * * 1083 1247 3228 * * * * * 25 0 * * * * * * 3293 0 0 S 26 3928 * * 2717 * 3919 4305 * 3810 * 4339 2385 * 4377 * 1922 4598 * * * 26 0 * * * * * * 3376 0 0 P 27 * * * * * 2686 * * * * * * 244 * * * * * * * 27 0 * * * * * * 3376 0 0 N 28 * * * * * * * * * * * 901 * * 1858 3027 3918 * * * 28 0 * * * * * * 3618 0 0 S 29 * * * * * 2629 * * * * * * * * * 254 * * * * 29 0 * * * * * * 3652 0 0 Y 30 * * * 3995 3185 * 2910 * 2971 * * 4449 * * 3321 5005 * * * 1359 30 0 * * * * * * 3652 0 0 F 31 * * * * 125 * * * * * * * * * * * * * * 3591 31 0 * * * * * * 3906 0 0 M 32 * * * * * * * 2234 * 1953 1618 * * 4459 * 4657 * 3079 * * 32 0 * * * * * * 3906 0 0 D 33 3591 * 1812 3667 * * * * 1992 * * 4299 * * 2903 4115 * * * 4061 33 0 * * * * * * 3906 0 0 V 34 * * * * * * * 2012 * 4115 5527 * * * * * 3591 762 * * 34 0 * * * * * * 3906 0 0 K 35 * * * 4188 * * 4336 4299 881 * * 4459 * 4588 2430 * * 5095 * * 35 0 * * * * * * 3906 0 0 C 36 * 100 * * * * * * * * * * * * * * * * * 3894 36 0 * * * * * * 3906 0 0 P 37 3723 * 4336 4188 * 4061 * 5239 4299 2266 * 3554 1704 5733 4828 5122 * * * * 37 0 * * * * * * 3906 0 0 G 38 * * 2024 4456 * 1530 * * 2624 * * 4297 * 4774 * 3149 * * * * 38 0 * * * * * * 3906 0 0 C 39 * 62 * * * * * * * * * * * * 4580 * * * * * 39 0 * * * * * * 3906 0 0 Y 40 * * 4465 3662 3889 1935 * * 2526 5708 * * * 3718 4057 * 4113 * * 2644 40 0 * * * * * * 3906 0 0 K 41 4665 * 4664 3517 * 4113 4057 * 2119 * * 1282 * * * 4186 5675 * * * 41 0 * * * * * * 3906 0 0 I 42 * * * 2400 * * * 1564 4297 3274 * * 4186 4991 * * 3329 2920 * * 42 0 * * * * * * 3906 0 0 T 43 * * * * * * * * * * * 2901 3890 1443 * 5111 1464 4664 * * 43 0 * * * * * * 3906 0 0 T 44 * 4057 * * * * * 1799 * * 4774 3890 * * * * 1760 1982 * * 44 0 * * * * * * 3906 0 0 V 45 4113 4057 * * * * * 1584 * 4333 * * * * * * 3883 1213 * * 45 0 * * * * * * 3906 0 0 F 46 * * * * 322 * * * * * * * * * * * * * * 2322 46 0 * * * * * * 3906 0 0 S 47 4825 * 3519 * * 4333 * * * * * * * * * 343 4654 * * * 47 0 * * * * * * 3906 0 0 H 48 * * * * * * 808 * 3209 * 4186 3986 * 3890 2889 * * * * * 48 0 * * * * * * 3906 0 0 A 49 810 * * 3890 * * * * * * * * 3454 * * 1885 * * * * 49 0 * * * * * * 3906 0 0 Q 50 2622 * * * * * 3226 * 4186 * * 3362 * 1748 * 2567 5111 3590 * * 50 0 * * * * * * 3906 0 0 T 51 * * * * 3590 * * * * * 5141 4333 * * 4665 2326 883 4113 * * 51 0 * * * * * * 3906 0 0 V 52 3755 * 5241 4654 * * * * 4297 * * 4057 3362 3556 * * 2583 1810 3590 4991 52 0 * * * * * * 3906 0 0 V 53 * * * * * * * 2420 3590 * * * * * * * * 454 * * 53 0 * * * * * * 3906 0 0 L 54 4456 * * * 3362 * * 4155 3128 2437 * 3258 * 4991 4187 4057 2863 3137 * * 54 0 * * * * * * 3906 0 0 C 55 * 109 * * * * * * * * * * * * * * * * * 3780 55 0 * * * * * * 3512 0 0 V 56 4303 * 3780 5346 * 5284 * 3792 3202 3022 * 3311 3120 3853 4160 * 5518 2648 * * 56 0 * * * * * * 3512 0 0 G 57 * * 3741 * 4160 1759 * 3225 4503 * * 2896 * * * 3464 * 2338 * * 57 0 * * * * * * 3512 0 0 C 58 * 0 * * * * * * * * * * * * * * * * * * 58 0 * * * * * * 3512 0 0 S 59 4188 * * * * 1004 * * * * * 3651 * 3654 * 2228 3755 * * * 59 0 * * * * * * 3512 0 0 T 60 3960 * 3920 4707 * * * * 3792 4188 * 3035 * 4503 3658 3328 1476 * * * 60 0 * * * * * * 3512 0 0 V 61 3920 * 5386 * * * * 3139 * 2935 * 4188 3353 4353 * * 2215 2008 * * 61 0 * * * * * * 3512 0 0 L 62 * * * * 3780 * * 1965 * 576 * * * * * * * * * * 62 0 * * * * * * 3512 0 0 C 63 1401 1808 * * * 4503 * * * 3920 * * * * * 4353 3741 3297 * * 63 0 * * * * * * 3512 0 0 Q 64 * * * 2241 * * * 4353 3140 * * * * 1850 3741 * 2191 * * 4188 64 0 * * * * * * 3512 0 0 P 65 3920 * * * * * * * * * * * 273 * * 3231 * * * * 65 0 * * * * * * 3512 0 0 T 66 4160 * * * * * * * * * * * * * 4628 2828 391 * * * 66 0 * * * * * * 3512 0 0 G 67 * * * * * 63 * * * * * * * * 4551 * * * * * 67 0 * * * * * * 3452 0 0 G 68 * * * * * 98 * * * * * * * * * 3934 * * * * 68 0 * * * * * * 3452 0 0 K 69 * * * 4166 * * * * 301 * * * * * 2916 * * * * * 69 0 * * * * * * 3435 0 0 A 70 603 4052 * * 3591 4466 * 4040 * 4309 * * * * * 4573 * * * * 70 0 * * * * * * 3435 0 0 R 71 4052 * 4082 * * * * * 1082 4040 * 4989 * * 2864 * * 2484 * * 71 0 * * * * * * 3435 0 0 L 72 * * * * 3407 * * 2004 * 1000 * * * * * 3591 * 3768 * * 72 0 * * * * * * 3435 0 0 T 73 2754 * * * * * * 3722 3719 * * 3188 * * * 1950 1593 * * * 73 0 * * * * * * 3133 0 0 E 74 3677 * 3496 1906 * 3107 * * 2456 * * * 3048 3794 * 3737 * * * * 74 0 * * * * * * 3006 0 0 G 75 * * * * * 1529 * * 3107 * * 3048 * 1672 * 3285 * * * * 75 0 * * * * * * 3006 0 0 C 76 * 886 * * * * * * * * 3204 * * * * * 4269 1745 * * 76 0 * * * * * * 2934 0 0 S 77 * * * 1631 * * * * 2603 * * * * 3204 * 1308 * * * * 77 0 * * * * * * 2934 0 0 F 78 * * * * 585 * * 2095 * * * * * * 3332 * * * * * 78 0 * * * * * * 2671 0 0 R 79 * * * * * * * * 2737 * * * * * 882 3496 * 3066 * 3332 79 0 * * * * * * 2671 0 0 R 80 * * * * * * * 3525 1334 * * * 3124 * 1316 * * * * * 80 0 * * * * * * 2671 0 0 K 81 * * * * * * * * 864 * * * * 2905 1658 * * * * * 81 0 * * * * * * 2322 0 0 Q 82 * * * * * * * * 1024 * * * 2552 1566 * * * * * * 82 0 * * * * * * 1788 0 0 H 83 * * * * * * 1000 * * * * * * * * * * * * 1000 83 0 * * 0 * * * 1124 0 0 //