HHsearch 1.5 NAME c9az5A_ FAM FILE c9az5A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9az5A_.a3m DATE Sat Dec 14 11:46:34 2024 LENG 80 match states, 80 columns in multiple alignment FILT 107 out of 212 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.1 EVD 0.4377 0.7655 SEQ >ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEEECC >ss_conf 99888659999748899989999999997099989999999998137808999734999999999997289789976349 >Consensus exxxxxyxViLxNDdxhtxexVixxLxxvxxxxxxxAxxixxxvhxxGxavvxxxxxexAexxxxxlxxxgLxatiexxr >c9az5A_ ESTEAPWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR >UniRef50_Q6APV7(17-102:102) ATP-dependent Clp protease adapter protein clpS n=9 Tax=Proteobacteria RepID=CLPS_DESPS E=9e-07 s/c=0.64 id=24% cov=100% ETREPPmYRVLIHNDDYTSMDFVVAILMQIFSKTEAVAEEIMLTVHSSEVGVAGLYTHEIAETKVAIVHQlaeqneFPLRCSLEKE- >UniRef50_B8BU43(101-180:194) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BU43_THAPS E=2e-17 s/c=1.12 id=24% cov=100% DTPEEVWRVILHNDEVHTFNYVIRSLQKVIGtLDKKKAHDICVVTHGTGQATVTQCWKEQAMKYCVGMQRFGLTASIAPE- >UniRef50_A8JGV8(82-165:169) Clp protease adaptor protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGV8_CHLRE E=1e-10 s/c=0.80 id=16% cov=92% ------YRVLLLDSPQHTEKGVVAAITRvVPGTNPDHARNCFATSKQLGMAIITTALKEHAELYREQLFTYRVRTALEPD- >UniRef50_C4R851(233-312:1852) Ubiquitin-protein ligase (E3) that interacts with Rad6p/Ubc2p n=1 Tax=Pichia pastoris GS115 RepID=C4R851_PICPG E=0.0004 s/c=0.57 id=20% cov=101% DTTSSHYMLVLYNDQLKQYRDAVQCIRAINGNSLEFAEMVANQIQNYGKAYVLGGDEAMIESKKTILDNYGMRYVIRSYR >UniRef50_C4QVD7(241-321:1811) Ubiquitin-protein ligase (E3) n=1 Tax=Pichia pastoris GS115 RepID=C4QVD7_PICPG E=1e-09 s/c=0.80 id=15% cov=101% DTNVQSWNVVLWNDEFHNYDEAIDCIQQVSRCSLSKGQADAQKINDFGFSIIrRSESLPLLIERCAKVEESGFTITILSDR >UniRef50_B8LC42(133-202:205) Predicted protein n=3 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LC42_THAPS E=8e-08 s/c=0.83 id=18% cov=81% --------LIRHDDCKHSNEFISECLSQVVGISEEDANLVSSLARQHGVALIEEFPRKYAVMYQQELESRGI-------- >UniRef50_B7Q7W6(146-213:1634) Ubiquitin ligase E3 alpha, putative n=1 Tax=Ixodes scapularis RepID=B7Q7W6_IXOSC E=5e-09 s/c=0.92 id=16% cov=85% ---QDTFVTMLFNDEAHTYEQVIQTLNRAIECTHREAIEYATTVDREGRSLVRSSSFADClQTFAMRLLSW---------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * 1628 645 * * * * * * * * * 4749 * * * * * * 1 0 * * * * * * 5269 0 0 S 2 2064 * 3148 4208 * 5742 * 5514 3036 * * * * 3349 * 2900 2326 * * * 2 0 * * * * * * 5657 0 0 T 3 4925 * 4984 3298 5756 * 4985 5706 4188 3613 * 3998 4510 * 3954 3736 1447 * * 6051 3 0 * * * * * * 5570 0 0 E 4 5102 * 2123 2342 * * * * 4829 5939 * 5162 3248 2814 * 3527 4537 3899 * 5623 4 0 * * * * * * 5867 0 0 A 5 5682 * 3747 4543 5786 2821 * 5867 4838 5820 * 3634 1452 4797 3967 3799 5982 * * * 5 0 * * * * * * 5646 0 0 P 6 6004 * * 5362 * 4177 4836 5100 4313 3097 4477 4603 1698 * 3511 3678 4122 4158 * * 6 168 3188 * 729 1334 * * 5645 2321 0 W 7 6723 * * * 2489 * 6072 * * * * * * * * 6305 * * 1663 1092 7 0 * * * * * * 6131 0 0 V 8 4721 4569 * 5269 5729 5877 4469 * 2294 4465 5469 4624 * 4760 1862 4552 5852 4032 * 3884 8 34 5422 * 1816 482 * * 6128 1660 0 T 9 * 4929 * * * * * 5124 * 2141 * * * * * * 3585 670 * * 9 0 * * * * * * 6229 0 0 I 10 * * 5522 * 6812 * * 1414 * 2787 4403 * * * 4431 * 5825 1596 * 7172 10 0 * * * * * * 6229 0 0 V 11 * 6559 * * 5636 * * 4253 * 516 3924 * * * 5504 * * 2945 * * 11 0 * * * * * * 6232 0 0 W 12 * * * * 3141 * 2347 4753 6595 2489 * 6981 * 6519 * * * 6198 2208 2214 12 0 * * * * * * 6232 0 0 D 13 * * 2881 * * * 5524 * * * * 247 * * * * * * * * 13 0 * * * * * * 6232 0 0 D 14 * 6103 77 * * * * * * * * 6297 * * * 5348 * * * * 14 0 * * * * * * 6232 0 0 P 15 * 5504 1242 1856 * 6517 * * * * * 4626 3100 4022 6236 4794 * * * * 15 0 * * * * * * 6232 0 0 V 16 6759 6103 5628 6129 2737 * 4238 3158 3893 4023 6825 5328 * 5348 6055 6696 5056 2159 6127 2770 16 0 * * * * * * 6232 0 0 N 17 * * * * * * 1094 * 5505 * * 2027 * * * 6717 1972 * * * 17 0 * * * * * * 6232 0 0 L 18 6944 * 4341 6543 * * 5933 * 4335 4156 * 4208 3068 5505 5524 3268 1032 * * * 18 0 * * * * * * 6232 0 0 M 19 6606 * * 4659 2103 * * 5193 5921 5035 1838 5504 * 5894 3873 * * 3916 * 2398 19 0 * * * * * * 6232 0 0 S 20 6543 * 1793 1475 * * * * 5348 * 6716 4378 4062 4290 4703 4273 4452 6370 * * 20 0 * * * * * * 6232 0 0 Y 21 6793 * 4708 3064 1929 4434 3760 * * 6055 * * * 3030 6236 5185 5834 5606 5279 2263 21 0 * * * * * * 6232 0 0 V 22 2917 * * * * * * 4613 * * 4966 * * * * * * 331 * * 22 0 * * * * * * 6232 0 0 T 23 3272 * 6835 4829 * 5834 * 1550 * 6191 * * * 5557 5943 4125 3952 1642 * * 23 0 * * * * * * 6232 0 0 Y 24 4277 * 2885 2419 5524 4830 4930 7015 3475 5918 5662 6898 * 3369 3418 5483 4926 6397 5101 3218 24 0 * * * * * * 6232 0 0 V 25 2916 3349 * * * 6481 * 3375 * 4206 4914 * * 3922 5933 3285 3611 1701 * * 25 0 * * * * * * 6232 0 0 F 26 * * * * 3795 * * 2461 * 575 5800 * * * * * * 4134 * * 26 55 4747 * 589 1576 * * 6232 2208 0 Q 27 3785 5301 * 4901 * * 6369 4519 3423 5035 2854 5832 * 3011 2368 4230 3959 3351 * * 27 0 * * * * * * 6232 0 0 K 28 3021 * 3483 3622 * 7072 3946 7066 2297 4221 6911 5313 * 4050 2908 3769 4846 5831 * 5921 28 127 3569 * 0 * * * 6232 2960 0 L 29 2571 4634 * 7248 4407 6268 5400 2504 * 4520 5559 * * * * 5569 * 1449 * 3784 29 0 * * * * * * 6232 0 0 F 30 6236 3053 * * 1621 * * 3329 6025 4011 * 5505 3135 * 7028 4216 4288 3210 * 7018 30 54 4770 * 0 * * * 6232 2247 0 G 31 * * 4246 5638 5177 1392 3369 6636 3697 * 6819 3571 * 4227 3213 3753 * * * 7321 31 32 5490 * 0 * * * 6237 1685 0 Y 32 * 2559 * * 4217 * 3966 4709 2423 2778 3067 5528 * 4310 6782 * 5385 4096 6575 4362 32 9 7326 * 0 * * * 6249 1000 0 S 33 5485 5941 2898 4180 5973 7072 * * 5969 * * 2950 4255 6191 * 1773 2031 * * * 33 0 * * * * * * 6249 0 0 E 34 4997 * 4018 2386 5628 6925 4383 4999 3209 2717 5433 6930 4040 4478 3546 4662 4866 5774 6280 5633 34 0 * * * * * * 6249 0 0 P 35 3354 * 2510 1767 * 5572 5976 7372 4023 5887 5648 6728 4534 3681 4032 3932 5747 5994 * * 35 0 * * * * * * 6249 0 0 H 36 4528 * 3041 2522 4223 5837 4557 * 2744 6856 5822 6278 * 3106 3431 5646 3563 4455 * * 36 11 7040 * 3170 170 * * 6249 1000 0 A 37 196 6635 * * * 3382 * * * * * * * * * 5583 * * * * 37 25 * 5837 * * * * 6249 0 0 T 38 4941 * 6777 2995 4328 7066 3810 4123 4611 4175 6879 4109 * 3868 3671 5318 3149 3273 5766 3687 38 0 * * * * * 0 6210 0 1000 K 39 2879 * 4541 3089 6920 6729 5518 7527 2878 4637 4294 4728 * 2687 3292 3695 4277 * * 7062 39 0 * * * * * 0 6210 0 1000 L 40 6361 4063 6313 * 4714 * 4057 1717 4922 2181 6083 6344 * * 5933 * 5493 2877 6369 4456 40 0 * * * * 0 * 6210 0 1000 M 41 1480 6624 * * 4490 * * * * * 1403 * * * * 5512 2524 6242 * * 41 0 * * * * * * 6249 0 0 L 42 5385 * 4983 4359 * 6918 5500 4558 7363 1824 3081 5064 * 4263 6509 4944 3159 4122 3246 5969 42 0 * * * * * * 6249 0 0 Q 43 5183 * 6562 1868 6856 * 4544 5281 2987 3918 * 5508 * 3261 3732 5418 3013 3844 * * 43 0 * * * * * * 6249 0 0 V 44 2004 * * * * * * 1762 * 5837 * * * * * 4702 4849 1454 * * 44 0 * * * * * * 6249 0 0 H 45 * * 2258 * * * 763 * 5385 * * 3994 * 3942 4780 6202 * * * * 45 0 * * * * * * 6249 0 0 N 46 4642 6310 5136 3585 5419 6624 3951 * 3228 6412 6847 2777 * 3451 2666 4418 2954 6025 * 5371 46 0 * * * * * * 6249 0 0 E 47 5115 7072 3972 2136 5738 5995 3772 5385 3855 4751 5423 3234 * 3630 4629 4491 3760 5969 * 4333 47 0 * * * * * * 6249 0 0 G 48 * * * 5828 * 59 * * 6280 * * * * 6708 * * * * * * 48 0 * * * * * * 6249 0 0 K 49 7005 * 6619 5596 5301 * 6528 4872 2543 4958 4987 6119 * 3852 1578 3557 5178 3346 * 5253 49 23 5969 * 0 * * * 6249 1000 0 A 50 892 4342 * 6782 * 2595 * * 6506 * * * * * 6303 2674 5452 5317 * 6790 50 23 5973 * 0 * * * 6249 1000 0 V 51 3815 * * 6735 * * * 2033 5941 3105 5226 * 5837 6974 4504 4375 4263 1624 * 5528 51 0 * * * * * * 6249 0 0 V 52 4183 2817 * * * * * 2517 * 3375 * * * * * * 6636 938 * * 52 19 6247 * 0 * * * 6235 1000 0 S 53 4446 * * 5505 4639 1875 * 4173 3897 2821 * * * * 3438 5795 3358 4638 4330 4118 53 62 4849 7094 1233 799 * * 6053 2376 0 A 54 4623 5371 5947 3401 * 5457 6625 3149 4643 5037 6203 5960 * 4528 3629 2683 3038 2822 * 4814 54 49 4913 * 0 * * 0 6054 1669 1000 G 55 2990 3406 * 4942 4058 1691 * * 5880 5524 * * * * * 4273 3883 * 5736 2318 55 51 4836 * 0 * * 0 6050 1722 1000 S 56 4777 * 3069 4522 * * 5529 5442 * 5007 6075 4124 2214 6604 5321 2500 2713 5253 4425 * 56 40 5199 * 0 * * 0 6159 1730 1000 R 57 6982 * * 4290 2985 6855 5293 4686 2595 2936 5054 * * 4997 2070 * * * * 2776 57 36 5360 * 802 1229 * 0 6148 1659 1000 E 58 4436 * 1907 1193 * * * * 3666 * * * 6064 5541 4415 5104 4090 * * * 58 0 * * * * 0 * 6148 0 1000 S 59 * * 3707 3084 6490 * 3809 2404 3474 4303 5021 6850 4883 4377 4182 4258 7209 2871 * 5561 59 0 * * * * * * 6289 0 0 M 60 528 3611 * * * * * 4876 6688 2826 5119 * * * * * * 6470 * * 60 27 5774 * 1572 591 * * 6285 1743 0 E 61 5999 * 6284 696 * * * 4937 4109 3710 6275 * * 4291 4917 5579 5523 4393 * * 61 0 * * * * * * 6251 0 0 V 62 5032 5864 * 3500 4182 * 4243 * 4244 2808 4263 6091 5239 5478 3447 4386 2059 4236 * 6355 62 0 * * * * * * 6243 0 0 D 63 5243 * 4384 * 4620 * 5324 3737 2018 4053 4052 * 4615 * 4216 * 5864 5371 6061 1907 63 0 * * * * * * 6243 0 0 V 64 2661 3298 * * * * 4225 6181 3529 5334 6590 * * 3294 3256 4551 * 1849 6387 6353 64 10 7155 * 2585 263 * * 6238 1000 0 S 65 3337 * 3510 2081 5721 * 5113 6590 3528 6222 5500 4606 * 3299 3520 5652 3638 4479 * 5533 65 13 6846 * 2585 263 * * 6238 1000 0 K 66 3751 * 5722 2942 * 5065 6781 3412 2343 4700 4965 5056 * 2312 3851 5042 5583 5369 * * 66 0 * * * * * * 6238 0 0 L 67 3883 * * * 6575 * * 2691 * 1194 3141 * * * * * 5196 2402 * * 67 49 4905 * 2422 298 * * 6405 1869 0 H 68 4188 * 5379 2522 5217 * 2763 4865 3694 4034 6475 3961 * 2174 4099 * 4975 6260 * * 68 74 4321 * 2585 263 * * 6363 2163 0 A 69 2767 * 4969 4390 * 2897 * * 4185 3967 6351 3051 * 4049 3192 2517 5197 6005 * * 69 39 5242 * 2585 263 * * 6324 1447 0 A 70 3885 * 4512 3852 2581 4137 3715 4653 4941 5302 * 3910 * * 3319 4613 5611 * 5295 2574 70 0 * * * * * * 6245 0 0 G 71 4439 * 5778 6538 * 776 6519 * 4658 * * 6549 2764 5224 4360 4128 * * * * 71 102 3874 * 3205 166 * * 6228 2404 0 L 72 * * * 5428 5645 * * 3555 * 552 3274 * * * 6345 * * 3755 * * 72 0 * * * * * * 6215 0 0 W 73 * * * * 5854 * 4087 6692 5008 3911 6089 * 6314 4395 2001 4192 1728 3395 4626 * 73 40 5186 * 0 * * * 6080 1399 0 A 74 1303 3535 * * * * * 4096 * 5696 * * * * * 2349 5042 2497 * 5215 74 0 * * * * * * 6080 0 0 T 75 3777 5393 4969 4544 5659 * * 4272 5296 * * * 5136 * * 2737 1109 3486 * * 75 0 * * * * * * 6041 0 0 M 76 * * * * * * * 1277 * 1621 2909 * * * * * * 3125 * 6114 76 0 * * * * * * 6020 0 0 Q 77 5566 * 4881 673 * * * * * 5179 5299 * * 4065 2642 * 5394 5559 * * 77 0 * * * * * * 5796 0 0 Q 78 * * * 3315 * * * * 2273 * * * 1406 4025 4268 2308 * * * * 78 0 * * * * * * 5718 0 0 D 79 3095 * 1234 1902 * * * * * 4287 * 5407 * * * 3853 * * * 4438 79 0 * * * * * * 5483 0 0 R 80 * * * * * * * * 3100 * * * * * 179 * * * * * 80 0 * * 0 * * * 4045 0 0 //