HHsearch 1.5 NAME c9aynB_ FAM FILE c9aynB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c9aynB_.a3m DATE Sat Dec 14 12:18:40 2024 LENG 77 match states, 77 columns in multiple alignment FILT 100 out of 206 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.1 EVD 0.4603 1.5931 SEQ >ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEEECC >ss_conf 98659999748899989999999998399999999999998236918999733999999999997289789976349 >Consensus xxxyxViLxNDdxhtxexVixxLxxvxxxsxxxAxxixxxvhxxGxavvxxxxxexAExxxxxlxxxgLxatiexdr >c9aynB_ EAPWVTIVWDDPVNLMSYVTYVFQKLFGYSEPHATKLMLQVHNEGKAVVSAGSRESMEVDVSKLHAAGLWATMQQDR >UniRef50_Q6APV7(20-102:102) ATP-dependent Clp protease adapter protein clpS n=9 Tax=Proteobacteria RepID=CLPS_DESPS E=2e-06 s/c=0.64 id=23% cov=100% EPPmYRVLIHNDDYTSMDFVVAILMQIFSKTEAVAEEIMLTVHSSEVGVAGLYTHEIAETKVAIVHQlaeqneFPLRCSLEKE- >UniRef50_B7G1Y3(11-87:87) Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G1Y3_PHATR E=3e-16 s/c=1.12 id=25% cov=100% EEMWRVVLHNDEVHTFNYVIRSLCKVIGtLDRKAAFEICVQTHGIGKATITKTWKKQAEQHCLGLQRQGLTVSISPD- >UniRef50_C7MWC9(8-80:88) ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MWC9_SACVD E=2e-08 s/c=0.83 id=23% cov=92% ---WHVDLHHDDVNRYPGMAFVLRHVCGLDKETGVALADEAQRHGTARVLSCdTRDDAERIVAEIQLLGVRATV---- >UniRef50_C1M0R4(426-472:2627) Ubiquitin ligase E3 alpha-related n=1 Tax=Schistosoma mansoni RepID=C1M0R4_SCHMA E=0.0003 s/c=0.98 id=12% cov=62% -RSFLVLLYNNEYHNYEQVIKTLRRVLDCTTQQGTHYAVLVNCDGRAV----------------------------- >UniRef50_C7PM80(24-98:102) ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PM80_CHIPD E=7e-14 s/c=1.05 id=25% cov=99% QFPFSLIVWNDEVNTFDWVIQSLIEVCDHTQEQAEQCALIIHHNGKYAVKQGEFTRLRPMCEALLDRGISATLEE-- >UniRef50_B8LC42(133-202:205) Predicted protein n=3 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LC42_THAPS E=3e-07 s/c=0.80 id=18% cov=84% -----LIRHDDCKHSNEFISECLSQVVGISEEDANLVSSLARQHGVALIEEFPRKYAVMYQQELESRGI-------- >UniRef50_Q4RM05(217-293:1710) Chromosome 10 SCAF15019, whole genome shotgun sequence. (Fragment) n=2 Tax=Tetraodontidae RepID=Q4RM05_TETNG E=1e-09 s/c=0.84 id=17% cov=101% DNMYYCVLYNDEHHSFDHVVYSLQRSINCEEGVAEMHTTVTDKEGRRAVKMGTLRSCQHTKDLIKSSSEHISLQPLR >UniRef50_Q6BHH4(242-319:1814) DEHA2G18568p n=3 Tax=Saccharomycetaceae RepID=Q6BHH4_DEBHA E=4e-09 s/c=0.80 id=18% cov=101% DSLWYLILWNDEHHDFPSATKAIKAAVGVNYSRAHEIASDINASGRCVLReSADYTELLRYQKLAESDGLVATITSAR >UniRef50_C4R851(239-312:1852) Ubiquitin-protein ligase (E3) that interacts with Rad6p/Ubc2p n=1 Tax=Pichia pastoris GS115 RepID=C4R851_PICPG E=7e-05 s/c=0.66 id=20% cov=97% ---YMLVLYNDQLKQYRDAVQCIRAINGNSLEFAEMVANQIQNYGKAYVLGGDEAMIESKKTILDNYGMRYVIRSYR # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * 1289 1518 * * * * * * * * * 2049 * * * * * * 1 0 * * * * * * 5115 0 0 A 2 5411 * 3780 4269 5375 3366 * * 5070 * * 4149 1080 5754 3140 4655 * * * * 2 0 * * * * * * 5196 0 0 P 3 * * * 5418 * 4414 * 5866 3812 2514 4165 5552 1487 * 3471 4270 4298 4654 * * 3 188 3034 * 1339 726 * * 5195 2440 0 W 4 6546 * * * 2675 * 5181 * * * * * * * * * * * 1588 1081 4 0 * * * * * * 6016 0 0 V 5 4877 4655 * 4716 5517 6099 5170 * 2195 4422 5277 4570 * 4690 2014 4411 5654 3887 * 3830 5 0 * * * * * * 6033 0 0 T 6 6390 4769 * * * * * 4463 * 2294 * * * * * * 3679 680 * * 6 0 * * * * * * 6203 0 0 I 7 * * 5328 * * * * 1512 * 2712 4518 * * * 4307 * 5725 1510 * 7058 7 0 * * * * * * 6203 0 0 V 8 * 6460 * * 5517 * * 4522 * 522 4197 * * * 5575 * * 2723 * * 8 0 * * * * * * 6305 0 0 W 9 * * * * 2950 * 2406 4811 * 2430 * 6911 * 6442 * * * 6972 2312 2111 9 0 * * * * * * 6305 0 0 D 10 * * 2690 * * * 5305 * * * * 287 * * * * * * * * 10 0 * * * * * * 6305 0 0 D 11 * 6039 78 * * * * * * * * 6271 * * * 5344 * * * * 11 0 * * * * * * 6305 0 0 P 12 5654 5575 1286 1978 * 6482 * * * * * 4505 2861 3897 6221 5526 * * * * 12 0 * * * * * * 6305 0 0 V 13 6704 6039 5532 6885 2806 * 4383 3126 4240 3867 6721 5889 * 5344 5654 6561 5094 1895 5788 3052 13 0 * * * * * * 6305 0 0 N 14 * * * * * * 1145 * 5327 * * 1852 * * * * 2024 * * * 14 0 * * * * * * 6305 0 0 L 15 6149 * 4795 6411 * * 5805 * 4249 3925 * 4105 3228 5327 5305 3250 1054 * * * 15 0 * * * * * * 6305 0 0 M 16 6651 * * 4491 2019 * * 4917 5717 5001 1849 5575 * 5795 3937 * * 4359 * 2435 16 0 * * * * * * 6305 0 0 S 17 6411 * 1776 1540 * * * * 4491 * 6601 4808 4078 4225 4546 4457 4401 6219 * * 17 0 * * * * * * 6305 0 0 Y 18 6660 * 5327 3216 2095 4324 3492 * * 5654 * * * 3135 6221 5024 5797 5487 5124 2071 18 0 * * * * * * 6305 0 0 V 19 2984 * * * * * * 4600 * * 4854 * * * * * * 326 * * 19 0 * * * * * * 6256 0 0 T 20 3514 * 6766 4473 * 5777 * 1464 * 5900 6852 * * 5453 * 4264 3358 1838 * * 20 0 * * * * * * 6256 0 0 Y 21 3805 * 2930 2416 5350 4763 4932 6927 3617 5831 5822 * * 3249 3315 5973 5033 6940 5076 3308 21 19 6241 * 0 * * * 6256 1000 0 V 22 2659 3207 * * * * * 3275 * 4153 4837 * * 4544 5844 3393 3342 1812 * * 22 0 * * * * * * 6256 0 0 F 23 6241 * * * 3608 * * 2726 * 551 5782 * * * * * * 4244 * * 23 82 4177 * 458 1879 * * 6256 2583 0 Q 24 4642 5146 6241 4692 * * 6384 4356 3358 5900 2632 5712 * 2992 2423 4184 4437 3171 * * 24 0 * * * * * * 6256 0 0 K 25 3036 * 3294 3829 * 6979 3667 6878 2485 4128 6930 6138 * 3537 3106 4274 4718 4873 * 5246 25 23 6007 * 0 * * * 6256 1573 0 L 26 2802 4753 * * 4156 6248 5010 2606 * 4456 5546 * * * * 5430 * 1334 * 3874 26 0 * * * * * * 6256 0 0 F 27 6208 2962 * * 1659 * * 3442 6687 3855 * 5375 3724 * 6903 4367 3976 2733 * * 27 123 3608 * 0 * * * 6256 2840 0 G 28 * * 3885 5064 5216 1405 3289 6531 4042 * * 3729 * 4237 3201 3645 * * * 7197 28 27 5748 * 0 * * * 6158 1401 0 Y 29 * 2700 * * 4065 * 3485 4614 2469 2741 2942 5357 * 4619 6760 * 5383 4967 6532 4190 29 17 6408 * 0 * * * 6158 1000 0 S 30 5901 5834 3009 4374 5866 6600 * * * * * 3140 4391 7021 * 1570 1943 * * * 30 0 * * * * * * 6158 0 0 E 31 3910 * 4732 2367 5897 * 4326 5536 3242 2863 5851 5649 4136 4915 3264 4378 4796 5758 6228 5419 31 0 * * * * * * 6158 0 0 P 32 3498 * 2622 1689 * 5463 5906 7264 4414 5324 5601 6649 4857 3516 4244 3647 5719 5865 * * 32 0 * * * * * * 6158 0 0 H 33 3655 * 3206 2657 4589 5803 4512 * 2792 6694 6480 5564 * 3079 3142 5561 3865 4550 * * 33 12 6939 * 3170 170 * * 6158 1000 0 A 34 155 6442 * * * 3860 * * * * * * * * * 5528 * * * * 34 26 * 5803 * * * * 6158 0 0 T 35 4840 * 6773 2598 3969 6960 3834 4297 4963 4917 5858 4164 * 3724 3375 5897 3222 3614 5752 3976 35 0 * * * * * 0 6217 0 1000 K 36 2767 * 5903 2828 6916 * 5441 * 3095 4641 4170 4491 * 2328 3697 3844 4304 * * 6566 36 0 * * * * * 0 6217 0 1000 L 37 6372 3966 6114 * 4933 * 3852 1697 5780 2105 5980 6233 * * 5677 * 5365 2957 6240 4900 37 0 * * * * 0 * 6217 0 1000 M 38 1571 6427 * * 4336 * * * * * 1422 * * * * 5083 2408 6460 * * 38 0 * * * * * * 6158 0 0 L 39 5383 * 5394 4292 * 6830 5188 4346 7318 1812 3108 5001 * 4131 6450 4897 3294 4040 3250 7033 39 0 * * * * * * 6158 0 0 Q 40 4208 * 6300 1937 6873 * 4457 5256 3008 3704 * 6442 * 3144 3869 5561 3080 4103 * * 40 0 * * * * * * 6158 0 0 V 41 1911 * * * * * * 1919 * 5803 * * * * * 4532 4706 1434 * * 41 0 * * * * * * 6158 0 0 H 42 * * 2294 * * * 727 * 5383 * * 4660 * 3804 4638 5901 * * * * 42 0 * * * * * * 6158 0 0 N 43 4512 5804 6124 3774 5917 6427 4117 6187 3519 7251 6793 2802 * 3185 2665 4579 2957 5943 * 4304 43 0 * * * * * * 6158 0 0 E 44 5023 6600 4249 2348 5485 5765 3714 4724 3469 4746 5834 3360 * 3614 4052 4457 3801 * * 4229 44 0 * * * * * * 6158 0 0 G 45 * * * 5723 * 63 * * 6228 * * * * 6548 * * * * * * 45 0 * * * * * * 6158 0 0 K 46 5690 * * 5267 5191 * 6449 5138 2255 5337 4931 6047 * 3950 1700 3366 5254 3500 * 5563 46 0 * * * * * * 6153 0 0 A 47 854 3783 * 6755 * 2858 * * 6315 * * * * * 6166 2832 5368 5252 * 6715 47 25 5863 * 0 * * * 6153 1000 0 V 48 3555 * * 6609 * * * 2405 5821 2901 5171 * 5795 * 4318 4322 3724 1651 * 5355 48 0 * * * * * * 6153 0 0 V 49 4252 2938 * * * * * 2317 * 3813 * * * * * * 6458 906 * * 49 23 6002 * 0 * * * 6195 1000 0 S 50 4551 * * 5578 4853 1886 * 3756 3524 2702 * * * * 3688 5064 3321 5075 4692 4615 50 72 4708 6623 1249 788 * * 6100 2376 0 A 51 4814 5406 5753 3376 * 5292 * 3131 4358 4744 6091 5794 * 4837 3807 2747 3144 2547 * 5161 51 26 5805 * 0 * * 0 6092 1000 1000 G 52 3539 3513 * 4802 3451 1632 * * 5780 5422 * * * * * 4097 3729 * 5642 2467 52 69 4419 * 0 * * 0 6211 1538 1000 S 53 4540 * 3187 4444 * * 5282 5379 * 4988 6800 4478 2471 * 5714 2302 2578 4557 4207 * 53 21 6129 * 0 * * 0 6208 1000 1000 R 54 6936 * * 4198 3083 * 5288 5766 2601 2786 4973 * 6150 4552 2230 * * * 6856 2687 54 36 5340 * 748 1305 * 0 6208 1635 1000 E 55 4457 * 1975 1198 * 6150 * * 3814 * * * 5865 5336 4573 4607 4207 * * * 55 0 * * * * 0 * 6208 0 1000 S 56 * * 3855 2929 6327 * 3738 2446 3118 4355 4859 * 4711 4545 3973 4569 7066 3110 * 5637 56 0 * * * * * * 6353 0 0 M 57 522 3545 * * * * * 4410 6451 2938 5123 * * * * * * * * * 57 18 6338 * 0 * * * 6348 1000 0 E 58 7061 * * 620 * * * 4796 4119 4092 6371 * * 4343 4881 5590 6429 4015 * * 58 0 * * * * * * 6347 0 0 V 59 4508 5695 * 3649 4028 6982 4354 * 5281 2649 4424 5779 4352 4846 3843 4126 2276 4106 * 6199 59 10 7159 * 2585 263 * * 6271 1000 0 D 60 6199 * 4156 * 4469 * 4485 3669 2044 4059 4395 * 5598 * 3693 * 5727 5200 6056 1984 60 0 * * * * * * 6271 0 0 V 61 2600 2915 * * * * 4551 6097 3651 5120 6598 * * 3620 3179 5104 6689 1821 * 6268 61 0 * * * * * * 6353 0 0 S 62 3113 * 3402 2173 6899 6907 5628 6598 3935 5228 4255 4635 * 3258 3784 5017 3671 5632 * 5088 62 32 5528 * 2585 263 * * 6353 1690 0 K 63 3415 * 5850 2911 * 5581 6682 3604 2277 4522 4523 4785 * 2487 3893 5003 5274 6545 * * 63 0 * * * * * * 6353 0 0 L 64 4044 * * 6633 6170 * * 2814 * 1102 3076 * * * * * 5679 2562 * * 64 39 5245 * 2585 263 * * 6429 1638 0 H 65 4218 6349 5268 2854 5187 * 3014 5283 3738 3565 6457 4037 * 2054 4303 * 4826 4869 * * 65 73 4340 * 2585 263 * * 6270 2164 0 A 66 2869 * 4514 4330 * 3081 * * 4362 3983 6355 3092 * 3868 2961 2429 5187 * * * 66 38 5270 * 2585 263 * * 6270 1446 0 A 67 3900 * 4989 3849 3051 5027 3895 5588 4583 5130 * 3831 * 4784 3241 4498 5542 * 4862 2251 67 0 * * * * * * 6271 0 0 G 68 4191 * 5832 6548 * 715 5605 * 5736 * * 6473 2718 5833 4318 4730 * * * * 68 96 3950 * 3267 158 * * 6196 2275 0 L 69 * * * 5334 5496 * * 3392 * 594 3240 * * * 6424 * * 3681 * * 69 0 * * * * * * 6188 0 0 W 70 * * * * 5872 * 4024 6705 5499 3709 * * 5947 4063 1884 3357 1944 3769 4817 * 70 16 6482 * 0 * * * 6068 1000 0 A 71 1329 3458 * * * * * 4002 * 5772 * * * * * 2450 5104 2397 * 5142 71 0 * * * * * * 6068 0 0 T 72 3363 5349 4997 3561 5724 * * 4026 5775 * * * 6426 * 6480 2483 1292 4225 * * 72 0 * * * * * * 6027 0 0 M 73 * * * * * * * 1323 * 1725 3108 * * * * * 6121 2714 * 6081 73 0 * * * * * * 5998 0 0 Q 74 * * 4861 623 * * * * * 4965 * * * 3961 2782 5438 5097 5489 * * 74 0 * * * * * * 5679 0 0 Q 75 * * * 2893 * * * * 2773 * * * 1231 4141 3860 2577 * * * * 75 0 * * * * * * 5598 0 0 D 76 3540 * 1038 1880 * * * * * 4276 * 5409 * * * 4862 * * * 4445 76 0 * * * * * * 5426 0 0 R 77 * * * * * * * * 2994 * * * * * 193 * * * * * 77 0 * * 0 * * * 4002 0 0 //