HHsearch 1.5 NAME c8zsqC_ FAM FILE c8zsqC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c8zsqC_.a3m DATE Sat Nov 22 12:32:40 2025 LENG 95 match states, 95 columns in multiple alignment FILT 72 out of 74 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.4281 0.5495 SEQ >ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCC >ss_conf 98777888784321569999998649971002232578987558728642898248974188213802789983598635776897899841149 >Consensus xxgxipxdxExATGlErxelxaxxxGxDxfdxxxxxxxxGTkexPxlVpSxxdxRiVGCxxxxdxhxvxWxxlxkgxpxRCxeCGxxfkLxxxxx >c8zsqC_ SGGGVPTDEEQATGLEREVMMAARKGLDPYNILAPKAASGTKEDPNLVPSITNKRIVGCICEEDNSTVIWFWVHKGETQRCPSCGTHYKLVSHQL >UniRef50_C8TDR9(44-122:220) Cytochrome c oxidase subunit, putative n=2 Tax=Apicomplexa RepID=C8TDR9_EIMTE E=3e-19 s/c=1.22 id=29% cov=82% ---------------ENQHMVGLLELYEYLKTAPFVGPFGTTQNPVLVPSVHTERIVGCTGgtGEDEHYPLWFRCREGFLYRCGECDQIFMHVR--- >UniRef50_C4Q309(68-142:220) Expressed protein n=3 Tax=Schistosoma mansoni RepID=C4Q309_SCHMA E=1e-14 s/c=1.08 id=28% cov=80% -----------------EDLIAEISEVEP-DTSRGEIKSSTKENPNLVASSNVRAVQQCHCSPHDHHLKSLVLYRNLPARCF-CGHWFLLVDEQ- >UniRef50_P29505(44-110:120) Cytochrome c oxidase subunit 5 n=1 Tax=Dictyostelium discoideum RepID=COX5_DICDI E=2e-13 s/c=1.14 id=27% cov=67% -----------------------------FGHEVLTGAFGTLKSPVIVESIFHSRIVACEGGDgEEHDILFHTVAEKKPTICLDCGQVFKLKH--- >UniRef50_Q5K8Q1(105-199:212) Cytochrome c oxidase polypeptide iv, mitochondrial, putative n=2 Tax=Filobasidiella neoformans RepID=Q5K8Q1_CRYNE E=1e-25 s/c=1.23 id=34% cov=98% -AGEVPNDENQSTGLERFELLGNLEGVDVFDMKPLEITRlGTVDEPIPIYSLFPERQIGCTGfPVDSHDTIWLNVnHTLKNHRCPECGSVYTLNFQ-- >UniRef50_B7G0C7(168-244:255) Predicted protein n=2 Tax=Bacillariophyta RepID=B7G0C7_PHATR E=1e-10 s/c=0.87 id=29% cov=80% ---------------ELDELEAANtEGYNDLGLVPPE-GTGTFASPILVPSRRATRQVGFVDPE-SHEVFWFTIHNDDNsYYIKDLGLFFKMLH--- >UniRef50_D2VFR7(66-160:196) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFR7_NAEGR E=8e-09 s/c=0.65 id=31% cov=85% ----LPTVFERAVGSERAELL----DPTLFDDHLPEvvdiesGVGSSLFNPIIVASRGePERVVGCLGEcwkandiDYHTTDMQFWVMKENTFSvCDECG LIF------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 1520 * * * * * * * * * * * * * * 618 * * * * 1 0 * * * * * * 2867 0 0 G 2 2082 * * * * 967 * * * * * 4035 4533 * * 3941 3592 * * * 2 0 * * * * * * 3596 0 0 G 3 * * 5003 * * 353 * * 4184 * * * * * 4130 4734 4799 * * * 3 0 * * * * * * 3973 0 0 G 4 * * 3724 2500 * 1980 * * 3893 * * * * * 2306 4882 2643 * * 5042 4 0 * * * * * * 3974 0 0 V 5 * 4390 * * 5545 * * 1276 * 4420 3757 * * * * * * 1614 * 3823 5 0 * * * * * * 4121 0 0 P 6 5195 * * * 5739 * * * * * * * 347 * * 3607 4578 5146 * 5979 6 0 * * * * * * 4121 0 0 T 7 * * 1818 * * * 4423 * * * * 3883 5243 * * 3453 1046 * * * 7 0 * * * * * * 4103 0 0 D 8 3770 * 849 5408 * * * * * * * 3783 2415 * * * * 4518 4495 * 8 0 * * * * * * 4158 0 0 E 9 5444 * 4062 2572 4001 * * 5087 * 1397 6404 * * * 6022 4440 4268 * 3385 4146 9 0 * * * * * * 4158 0 0 E 10 * * 4236 342 4331 * * * * * * 5473 * 3542 * * * * * * 10 53 4802 * 0 * * * 4166 1000 0 Q 11 * * * * * * 2071 5513 * 2881 * 5389 * 997 4573 * * * * 4741 11 0 * * * * * * 4166 0 0 A 12 223 * * 4366 * * * * * * * * * * * 4123 * 4734 * * 12 0 * * * * * * 4327 0 0 T 13 6272 5458 * 4884 * * * * * * * * * * * * 286 3178 * * 13 0 * * * * * * 4327 0 0 G 14 * * * * * 50 * * * * * * * * * 4884 * * * * 14 32 5513 * 1585 585 * * 4327 1000 0 L 15 * * * 4856 4153 * 4537 3319 4687 890 4108 * * * 3991 4851 5905 6019 * * 15 28 5707 * 0 * * * 4327 1000 0 E 16 5082 * 4921 296 6125 * * * 4289 * * * * 4622 * * * * * 5883 16 41 5162 * 1280 766 * * 4466 1276 0 R 17 * * * 7488 * * 5659 * 1813 4338 * 5152 * * 707 * * * * * 17 68 4446 * 0 * * * 4466 1356 0 E 18 3719 * 4270 2601 3247 * * 4370 2642 2766 * * * 3417 3324 * * * * 4237 18 0 * * * * * * 4592 0 0 V 19 4317 * 5212 505 * * 5240 6580 * 3846 5774 * * 4564 * * 6408 4668 * * 19 0 * * * * * * 4592 0 0 M 20 * * 6379 * 5940 * 6076 3539 * 695 2271 * * * * * * 5031 * 6013 20 20 * 6209 * * * * 4616 0 0 M 21 5370 * 2939 3055 * * * 4001 6362 1212 3999 * * 3845 * * * 3827 * 5934 21 42 * 5122 * * * 0 4614 0 1000 A 22 1047 4985 * 5533 6033 1929 * 6349 6662 4319 * * * * 5011 5418 5689 * 5399 6041 22 24 * 5899 * * * 0 4550 0 1553 A 23 1972 * 6033 2798 * 5678 * 4708 2166 3851 4005 4695 * 6024 3499 * 4993 * * * 23 0 * * * * * 0 4552 0 1990 R 24 3303 * * 3628 * * * 4516 2644 1549 3398 4216 * 4857 4914 6024 * 4623 * * 24 50 4867 * 0 * 585 1585 4552 1000 1990 K 25 2254 * * 1950 * 3526 5284 4760 3592 6072 * * * 2787 * 3756 4850 5021 * * 25 28 * 5680 * * 0 * 4497 0 1000 G 26 * 5898 5151 5241 5551 333 * * * 5611 * 3843 * 5440 * * * * * * 26 0 * * * * * 0 4603 0 1000 L 27 4611 4980 3511 3760 * * * 3386 3910 3977 * 2771 5151 6391 4337 * 5898 2352 * 3452 27 303 2401 * 0 * 0 * 4603 2620 1000 D 28 * * 503 3113 * * * * 4749 6262 * 4592 * * 6246 * 3753 * * * 28 41 5141 * 0 * * * 4632 1338 0 P 29 5496 * 4955 * 6053 * * 4353 * 3639 * * 1123 4908 3540 * * 2462 * 4594 29 72 * 4366 * * * * 4630 0 0 Y 30 * * 6230 * 612 * * * * 2940 * * * * * * * * 4354 2706 30 0 * * * * 0 * 4535 0 1307 N 31 5490 * 982 3433 5808 3550 * * 4571 4470 * 3560 * 6255 5992 3739 * * * * 31 110 4696 4841 656 1452 * * 4860 1571 0 I 32 6274 * 3877 6280 5961 * 4370 3174 5887 2710 1517 * * 5034 4893 5518 3407 4986 * * 32 80 4219 * 0 * 0 * 4847 1993 1472 L 33 4866 * 2971 3689 * * 4157 5516 2081 4246 3459 4719 * * 3448 3171 6356 4324 * * 33 96 3963 * 1488 636 * * 4860 2181 0 A 34 3970 * * * 3502 5641 4946 6507 3689 5261 5990 * 1301 * 3517 6618 6180 3322 * 4383 34 0 * * * * * * 4856 0 0 P 35 5990 * * * 3490 4334 4911 3687 5805 1782 * 6507 1676 * 6252 * * 4222 * 4821 35 66 4485 * 0 * * * 4856 1538 0 K 36 * * 2941 2000 * * * 6301 1901 4834 * 5975 5151 5026 3514 4898 4140 4273 * * 36 114 4437 5059 1999 415 * * 4966 1617 0 A 37 2971 * 4129 4854 * 1781 * 3023 6860 5855 5022 * * 5414 2781 3092 6484 6298 * * 37 51 4846 * 1585 585 0 * 4894 1000 1000 A 38 3824 * * 4876 * 2128 6037 * 3858 * * * 1918 4944 * 2736 3996 4700 * 4872 38 50 4876 * 0 * * * 4970 1433 0 S 39 3226 * * * 2432 4080 5063 5523 3982 6585 * 5118 3073 * 2972 2861 4296 5059 5071 * 39 321 2327 * 216 2848 * * 4976 2455 0 G 40 * * * * * 273 * * * * * 4346 * * * 3024 * * * * 40 32 5523 * 0 * * * 4976 1000 0 T 41 * * * * * * * * * * * * * * 4553 2745 307 * * * 41 26 5796 * 2807 222 * * 4976 1000 0 K 42 5310 * * 3643 4993 5704 * 4922 1252 3259 3647 * 5463 * 3803 * 4440 3903 * * 42 0 * * * * * * 4906 0 0 E 43 3836 * 2608 1050 5238 * * * 3946 5751 * 4254 * 3996 * * 4930 5310 * * 43 0 * * * * * * 4906 0 0 D 44 3704 5286 1852 4497 * * * * 4030 5463 * 1555 * * * 2819 6583 * * * 44 28 5704 * 2807 222 * * 4906 1000 0 P 45 * * * * * * * * * * * * 0 * * * * * * * 45 0 * * * * * * 4906 0 0 N 46 3762 4840 * * * * 4441 1556 * 6338 * 2180 * * 4485 6470 3728 3473 * 4299 46 0 * * * * * * 4906 0 0 L 47 * * * 4389 * 5310 * 1923 4285 1482 4289 * 6098 * 5126 5665 * 3049 * 5704 47 0 * * * * * * 4906 0 0 V 48 * * * * * * * 2400 * * 5126 * * * 5704 * * 391 * * 48 49 6338 5584 0 * * * 4906 1000 0 P 49 4094 * 4947 3678 4661 * 5699 * 3407 * * 6003 940 5158 4681 * 4077 * * 6081 49 0 * * * * 0 * 4872 0 1000 S 50 4287 * * * * 6013 * * * * * * * * * 188 4170 * * * 50 0 * * * * * * 4906 0 0 I 51 2552 5104 5988 6338 3642 4738 3896 3759 * 3549 4940 6710 * 5751 4110 4676 4584 4422 * 2456 51 0 * * * * * * 4906 0 0 T 52 3773 6189 3214 5534 2423 3079 4921 5495 * 5806 4357 3678 * * 4993 4379 5033 5683 4947 3094 52 55 4748 * 0 * * * 4906 1521 0 N 53 4239 * 1258 3221 * 5495 4771 * 5106 * * 4858 2564 5272 * 5286 4545 4798 * * 53 0 * * * * * * 4906 0 0 K 54 4218 6318 * 1641 3579 5318 * 5584 2869 * * * * * 3856 3660 4993 4864 * 2912 54 33 5463 * 1000 1000 * * 4906 1000 0 R 55 5264 * * * * * * * * * * * * 3365 190 * * * * * 55 0 * * * * * * 4906 0 0 I 56 * * * * * * 5604 1403 * 4649 3949 6550 * 4442 * 5584 4864 2439 * 2320 56 0 * * * * * * 4906 0 0 V 57 4083 * * * * * * 2427 * 4609 * * * 5264 * * * 539 * * 57 0 * * * * * * 4906 0 0 G 58 4397 5691 * 5126 * 265 * * * * * * * 4415 * * * * * 5286 58 126 5584 3989 0 * * * 4906 1000 0 C 59 5135 187 * * 4931 * * * * * * * * * * 4832 * 5324 * * 59 17 6397 * 3907 100 0 * 4804 1000 1689 I 60 * * * 5790 5988 * 4415 2309 5495 4353 5914 * 3684 * * 4569 1656 2376 * * 60 58 4670 * 0 * * * 4906 1323 0 C 61 * 1387 3660 5126 4670 1343 * * * * * * * * 5463 4864 * 5683 * * 61 601 1667 5286 894 1114 * * 4906 3184 0 E 62 5040 * 4893 1565 * 2797 4832 * * 4610 * 5692 1921 * * 3402 * * * * 62 40 5198 * 2807 222 0 * 4862 1000 1000 E 63 2798 * 2584 1410 * 5318 * * * * * 4864 2322 5914 * 5463 * 6098 * * 63 73 5790 4993 0 * * * 4906 1000 0 D 64 5262 * 613 2883 * * 3751 * * * * 5654 * 5479 * 4636 * * * 5162 64 89 4067 * 512 1743 0 * 4817 1963 1000 N 65 2955 * 3138 2639 * 4068 4460 * * * * 4486 * 4533 4648 1551 * * * 5463 65 22 * 6075 * * * * 4906 0 0 S 66 * * 4723 5670 5724 5866 1124 * 5458 * * * * * 5576 3083 2016 5276 * 6293 66 59 4648 * 788 1249 0 * 4895 1494 1000 T 67 3336 * 2454 4198 5088 * 3937 5257 5495 4780 6195 3256 4684 5310 * 4611 3182 4300 * 3319 67 17 * 6425 * * * * 4906 0 0 V 68 * * 5237 * * * 5278 1761 5802 3417 * * 3094 * * * 4043 1460 * * 68 26 * 5802 * * 0 * 4909 0 1000 I 69 * * * 6258 4992 * 4748 2757 3496 3230 4272 2962 * 4974 6182 6179 4315 2254 * 3723 69 0 * * * * 0 * 4906 0 1000 W 70 * * * * 3913 5126 * * * 4460 * * * 5238 * 5264 5286 * 510 3662 70 0 * * * * * * 4906 0 0 F 71 * * * * 1274 4389 4756 5704 * 2332 1817 * * * * * * * * * 71 0 * * * * * * 4906 0 0 W 72 * * * 5751 * * 6215 4405 3299 4475 5599 3870 * * 3780 * 2253 3711 1616 * 72 0 * * * * * * 4906 0 0 V 73 * 3732 * * * * * 3993 * 883 4210 5722 4721 * * * * 2260 * * 73 61 4602 * 0 * * * 4906 1546 0 H 74 5790 * 5081 2066 5014 * 2621 * 3267 * 5238 4947 * 6161 2921 5255 3245 * * 3650 74 0 * * * * * * 4906 0 0 K 75 4436 * 4823 2246 5728 * * * 1449 5126 * 4993 * 4365 2945 4917 4648 6491 * * 75 0 * * * * * * 4906 0 0 G 76 * * 2899 3100 * 776 * * 5119 4411 * 3710 * * 6252 * * * * * 76 0 * * * * * * 4906 0 0 E 77 4715 * 3639 2342 4321 * 5743 * 1896 4427 * 3577 3619 4291 4423 6349 * 5299 * * 77 38 5263 * 0 * * * 4825 1570 0 T 78 3964 * * * * 5143 4929 5424 * 3472 6208 4084 1046 6160 * 4603 4489 3250 * * 78 100 3895 * 0 * * * 4825 1816 0 Q 79 3770 * * 4057 4046 5143 2920 * 2763 * * * 4383 2508 3396 5516 4697 4730 * 3615 79 57 4698 * 0 * * * 4825 1413 0 R 80 * * * 3920 * 5720 * 5731 * * 4829 * * 3876 532 5255 * 6311 * 3995 80 74 4325 * 0 * * * 4854 1697 0 C 81 * 168 * * 5302 5569 * 5011 * 4931 * * * * * * * * * * 81 490 * 1797 * * * * 4841 0 0 P 82 * * 4801 * 3405 3534 * * 4633 5291 4477 * 1073 * * 4920 6179 4832 3589 4947 82 196 * 2979 * * 0 * 4569 0 3034 S 83 * * 2507 975 * 6185 5982 * * 4233 6300 * * 4709 4248 4914 6520 3559 * * 83 34 * 5417 * * 0 * 4695 0 2037 C 84 * 251 * * * * * 4863 * 4948 * 5241 * * * 5566 4458 * * * 84 0 * * * * 0 * 4814 0 1000 G 85 * * 4312 4931 * 302 * * * * * 5249 * * * 4647 4659 * * * 85 0 * * * * * * 4841 0 0 T 86 5607 6024 * 4184 * * 2018 * 4410 4121 * 3090 * 2354 * 2800 4976 5390 * 4460 86 0 * * * * * * 4841 0 0 H 87 * * * * 3654 * 3971 3702 * * * * * * * * * 1706 1773 2467 87 0 * * * * * * 4841 0 0 Y 88 * * * * 697 * * * * 5457 * * * * * * * 4629 5265 1767 88 0 * * * * * * 4841 0 0 K 89 6519 * * 3216 * * * 5913 1045 4320 3543 * * 3440 6569 6728 5476 3189 * * 89 0 * * * * * * 4784 0 0 L 90 * * * * * * 4626 6552 * 324 2739 * * * * * * * * * 90 0 * * * * * * 4699 0 0 V 91 * * 3055 3932 * * * 3936 2025 4447 * 4488 * 4083 * * * 1499 * * 91 0 * * * * * * 4418 0 0 S 92 * * 3271 3270 3016 * 1982 * 4761 * * 4765 3835 * 2104 5619 * * * 5698 92 0 * * * * * * 4290 0 0 H 93 * * * 2980 * * 1521 * 2893 * * * * 2719 3789 * 3839 * * 3378 93 0 * * * * * * 3716 0 0 Q 94 * * * 658 * * * * * * * * 3844 1753 * * * * * * 94 0 * * * * * * 3152 0 0 L 95 * * * * * * * 2032 * 405 * * * * * * * * * * 95 0 * * 0 * * * 2009 0 0 //