HHsearch 1.5 NAME c8z81K_ FAM FILE c8z81K_ COM /bmm/www/servers/phyre2/HH/hhmake -i c8z81K_.a3m DATE Sat Feb 22 09:07:15 2025 LENG 46 match states, 46 columns in multiple alignment FILT 18 out of 20 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.4 EVD 0.4006 -0.4777 SEQ >ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >ss_conf 9401102136899999999999999999999854776564468899 >Consensus MwkiWxxfDpRrxlvaxxxfLxxLAlxIHfilLsTxrfNWleGapy >c8z81K_ MWRMWKILDYRRTVVLAHVGMAVLALLIHFILLSTENFNWLQGNPY >UniRef50_P80103(1-45:65) Light-harvesting protein B800/830/1020 alpha-2 chain n=1 Tax=Halorhodospira halochloris RepID=LHA2_ECTHL E=3e-07 s/c=1.25 id=46% cov=100% MWKLWKFVDFRMTAVGFHIFFALIAFAVHFACISSERFNWLEGAP- >UniRef50_P80102(1-45:52) Light-harvesting protein B800/830/1020 alpha-1 chain (Fragment) n=2 Tax=Ectothiorhodospiraceae RepID=LHA1_ECTHL E=4e-07 s/c=1.24 id=48% cov=100% MWRIWKVFDPRRILIATAIWLIIIALTIHVILMTTERFNWLEGAP- >UniRef50_B8KEW4(1-44:63) Antenna complex alpha/beta subunit domain protein n=2 Tax=unclassified Gammaproteobacteria RepID=B8KEW4_9GAMM E=7e-09 s/c=1.40 id=47% cov=98% MHKIWMIFDPRRILVANAIFLFTLAILIHFILLSTAKYNWIEGD-- >UniRef50_P35092(1-45:50) Light-harvesting protein B-880 alpha chain n=12 Tax=Proteobacteria RepID=LHA6_RHOAC E=4e-08 s/c=1.32 id=50% cov=100% MYKLWLLFDPRRALVALSAFLFVLALIIHFIALSTDRFNWLEGKP- >UniRef50_P51756(1-44:67) Light-harvesting protein B-870 alpha chain n=3 Tax=Proteobacteria RepID=LHA1_RHOGE E=4e-07 s/c=1.26 id=44% cov=98% MWRIWRLFDPMRAMVAQAVFLLGLAVLIHLMLLGTNKYNWLDGA-- >UniRef50_P80100(1-44:46) Light-harvesting protein B800/850/890 alpha-1 chain (Fragment) n=6 Tax=Proteobacteria RepID=LHA1_HALHL E=6e-07 s/c=1.26 id=56% cov=98% MWRLWKLYDPRRVLIGIFSWLAVLALVIHFILLSTDRFNWVGGA-- >UniRef50_P04123(10-50:69) Light-harvesting protein B-1015 alpha chain n=2 Tax=Blastochloris viridis RepID=LHA_RHOVI E=2e-05 s/c=1.23 id=50% cov=91% -WKLWLILDPRRVLTALFVYLTVIALLIHFGLLSTDRLNWWE---- >UniRef50_A9DA68(1-45:65) Antenna complex, alpha/beta subunit n=4 Tax=Alphaproteobacteria RepID=A9DA68_9RHIZ E=2e-08 s/c=1.35 id=50% cov=100% MWRIWMIFDPRKTLVVQGVFLFALAVMIHLVLLSTTRFNWFEGAP- >UniRef50_C5SDQ1(5-50:66) Antenna complex alpha/beta subunit n=2 Tax=Allochromatium vinosum RepID=C5SDQ1_CHRVI E=1e-06 s/c=1.18 id=32% cov=102% LYKIWLAFDPRMALIGLGAFLFALALFIHYMLLRSPEFDWLLGPDY # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 2639 252 * * * * * * * * * 1 0 * * * * * * 2390 0 0 W 2 * * * * * * 2827 * * * * * * * * * * * 532 2580 2 0 * * * * * * 2475 0 0 R 3 * * * * * * * * 659 * * * * * 1447 * * * * * 3 0 * * * * * * 2475 0 0 M 4 * * * * * * * 1024 * 1894 3163 * * * * * * 2972 * * 4 0 * * * * * * 2475 0 0 W 5 * * * * * * * * * * * * * * * * * * 0 * 5 0 * * * * * * 2475 0 0 K 6 * * * * * * * * 1709 1072 2712 * * * 3929 * * * * * 6 0 * * * * * * 2475 0 0 I 7 3693 * * * 3243 * * 1793 * 1330 4042 * * * * * * 3833 * * 7 0 * * * * * * 2475 0 0 L 8 * * * * 620 * * * * 2880 * * * * * * * 2683 * 4110 8 0 * * * * * * 2475 0 0 D 9 * * 0 * * * * * * * * * * * * * * * * * 9 0 * * * * * * 2475 0 0 Y 10 * * * * 3243 * * * * * * * 283 * * * * * * 3791 10 0 * * * * * * 2475 0 0 R 11 * * * * * * * * * * 3929 * * * 98 * * * * * 11 0 * * * * * * 2475 0 0 R 12 * * * * * * * * 4134 * 2450 * * * 516 4042 * * * * 12 0 * * * * * * 2475 0 0 T 13 1939 * * * * * * 2574 * * * * * * * * 1465 2259 * * 13 0 * * * * * * 2475 0 0 V 14 3243 * * * 4382 * * * * 497 3929 * * * * * * 3791 * * 14 0 * * * * * * 2475 0 0 V 15 * * * * * * * 1969 * * * * * * * * 3975 554 * * 15 0 * * * * * * 2475 0 0 L 16 872 * * * * 2054 * * * 2684 * * * * * * * 4134 * * 16 0 * * * * * * 2475 0 0 A 17 3791 * * * 3243 * * 4110 * 1232 * 4390 * 2552 * * 3833 4319 * * 17 0 * * * * * * 2475 0 0 H 18 2034 * * * 1670 2456 2491 * * * * * * * * 4575 4665 * * * 18 0 * * * * * * 2475 0 0 V 19 1932 * * * * * * 2162 * * * * * * * 4110 3176 1532 * * 19 0 * * * * * * 2475 0 0 G 20 * * * * 442 3791 * * * * * * * * * * * * 2965 3975 20 0 * * * * * * 2475 0 0 M 21 * * * * 3243 * * * * 283 3791 * * * * * * * * * 21 0 * * * * * * 2475 0 0 A 22 2084 * * * 1139 * * 3833 * 3929 * * * * * * 3137 4042 * * 22 0 * * * * * * 2475 0 0 V 23 2896 * * * * 3190 * 3283 * 2703 * * * * * 4665 4390 1277 * * 23 0 * * * * * * 2475 0 0 L 24 * * * * * * * 2063 * 395 * * * * * * * * * * 24 0 * * * * * * 2475 0 0 A 25 142 * * * * 3411 * * * * * * * * * * * * * * 25 0 * * * * * * 2475 0 0 L 26 * * * * 3243 * * 3448 * 754 * * * * * * * 2252 * * 26 0 * * * * * * 2475 0 0 L 27 2683 * * * 3693 * * 3542 * 1265 3252 * * * * * 3833 3475 * * 27 0 * * * * * * 2475 0 0 I 28 * * * * * * * 161 * * * * * * * * * 3243 * * 28 0 * * * * * * 2475 0 0 H 29 * * * * * * 0 * * * * * * * * * * * * * 29 0 * * * * * * 2475 0 0 F 30 * * * * 662 * * * * 2552 4319 * * * * * * 3833 * 3693 30 0 * * * * * * 2475 0 0 I 31 3243 * * * * 3975 * 811 * 4042 2806 * * * * * * 4134 * * 31 0 * * * * * * 2475 0 0 L 32 4575 2588 * * * * * * * 337 * * * * * * * * * * 32 0 * * * * * * 2475 0 0 L 33 * * * * * * * 3243 * 279 3833 * * * * * * * * * 33 0 * * * * * * 2475 0 0 S 34 * * * * * 2985 * * * * * * * * 3693 462 3833 * * * 34 0 * * * * * * 2475 0 0 T 35 * * * * * * 4042 * * * * * * * * 2450 403 * * * 35 0 * * * * * * 2475 0 0 E 36 3354 * 1781 1798 * * * * * * * 3356 2996 * * 4509 4134 * * * 36 0 * * * * * * 2475 0 0 N 37 * * * 2972 * * * * 2782 * * 3791 * * 720 4382 * * * * 37 0 * * * * * * 2475 0 0 F 38 * * * * 507 * * * * 3975 * * * * * * * * * 2103 38 0 * * * * * * 2475 0 0 N 39 * * 3693 * * * * * * * * 116 * * * * * * * * 39 0 * * * * * * 2475 0 0 W 40 * * * * * * * * * * * * * * * * * * 0 * 40 0 * * * * * * 2475 0 0 L 41 * * * * 4134 * * 4390 * 435 4870 * * * * * * 4110 3975 * 41 0 * * * * * * 2475 0 0 Q 42 * * 2522 776 * 4110 * * * 3693 * * * 3232 * * * * * * 42 0 * * * * * * 2475 0 0 G 43 * * * * * 0 * * * * * * * * * * * * * * 43 0 * * * * * * 2360 0 0 N 44 796 * 3717 * * * * * 3972 * * 2533 3166 * * * * * * * 44 0 * * * * * * 2421 0 0 P 45 * * 2747 * * * * * * * * * 233 * * * * * * * 45 0 * * * * * * 2254 0 0 Y 46 * * * * * * * * * * * * * * * * * * * 0 46 0 * * 0 * * * 1595 0 0 //