HHsearch 1.5 NAME c8z5uS_ FAM FILE c8z5uS_ COM /bmm/www/servers/phyre2/HH/hhmake -i c8z5uS_.a3m DATE Sat Oct 25 12:15:00 2025 LENG 89 match states, 89 columns in multiple alignment FILT 101 out of 130 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.5 EVD 0.4873 1.2910 SEQ >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 98799999999999999999999999999999999999999774541487899999999999999999999999999999999655419 >Consensus MtxxxvixlxxxalxxxlxlsxPxLxxalvVGlvIsixQAxTQIqEqTLsFvPKliavxxxlxxxgpwmxxxlxxfxxxifxxipxxix >c8z5uS_ MTPEMFVELFREALWMVLIMVCAIIIPSLLIGLIVAIFQAATSINEQTLSFLPRLIVTLLALMLFGHWMTQMLMEYFYGLIERLPQVLY >UniRef50_A4JPT8(1-84:92) Type III secretion protein, HrpO family n=18 Tax=Burkholderiaceae RepID=A4JPT8_BURVG E=7e-06 s/c=0.62 id=31% cov=96% MTSSTILDLTRQALMLVLLLSLPIVAIATVTGLVVAILQAVTQVQDANIGIVVRLIAVMVALVLLSGWLGSEVLRFAQQALERM----- >UniRef50_A5G0E8(1-87:88) Export protein FliQ, family 3 n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0E8_ACICJ E=5e-07 s/c=0.64 id=24% cov=99% MTDPAVITSLHEAFLVAAQLSAPPLLAALVAGVVISLLQAVTQINEATIVFLPKMAAVAGTLMIMGSFLLGTLSQFAHEIFTAMIHV-- >UniRef50_A3ZNZ0(1-88:91) Probable flagellar biosynthetic protein fliQ n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZNZ0_9PLAN E=1e-09 s/c=0.73 id=30% cov=100% MDVTTTVDLTREAMMVALWIAAPALVTGMLVGLAIGLLQALTQIQDQTVAFVPKFLAMAAAMLFALPWVLQRLMVYTETLVTHIPDRL- >UniRef50_B5YIZ1(1-88:89) Flagellar biosynthetic protein FliQ n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIZ1_THEYD E=5e-09 s/c=0.71 id=33% cov=100% MTVEFLNYISKQTFETILLVGGPVLLVSLLVGLIIGLFQAITQLQEMTISFVPKVIAVFLTLLLTIPWMVNIMTKFTRGIFENLPMYV- >UniRef50_Q1NCV2(2-87:89) Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCV2_9SPHN E=2e-07 s/c=0.66 id=25% cov=98% --SDSIIRMTIDALWLVLLLSAPPIVAASAVGLLVALVQAATQLQEQTLQYTLKFFAIVATIFLTASLLAGSLYQYGNTIFTQFPAMV- >UniRef50_A7GNJ5(1-88:91) Export protein FliQ family 3 n=86 Tax=Bacillales RepID=A7GNJ5_BACCN E=4e-06 s/c=0.60 id=26% cov=100% MNTSPIIDIFQSFFYKGVMILLPIAGVSMVVVVVIAVIMAMMQIQEQTLTFLPKMASIVLVIIILGPWMFQELTTLILDLFDKIPSLL- >UniRef50_D2LCZ2(1-86:88) Flagellar biosynthetic protein FliQ n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LCZ2_RHOVA E=4e-09 s/c=0.73 id=24% cov=98% MNQADAMDLVKSAIWVVILASGPMIGAAMAVGIAISLFQALTQIQEATLTFIPKIVTVFVVAMLTASFIGSVLLGISEQAYSRIEH--- >UniRef50_B9JJ66(1-88:89) Flagellar biosynthetic protein (FliQ) n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JJ66_AGRRK E=4e-06 s/c=0.60 id=25% cov=100% MGQEQISAEIGASILATFALAGPMLGLAAILGLVIAIFQAATQIQEQTIAQIVKIFVLSFVLLVFGRALATPLLEHSIHIFNDFPTMV- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 4230 79 * * * * * * * * * 1 0 * * * * * * 4477 0 0 T 2 6481 * 3165 4095 * 4212 * * * * * 2712 * * * 2755 1108 * * * 2 0 * * * * * * 4514 0 0 P 3 3670 * 3620 2853 5966 5153 5260 4642 * * * * 2219 2832 * 3423 3552 4117 * * 3 0 * * * * * * 4529 0 0 E 4 3357 * 1992 1973 * 3539 * * * 4708 6963 5510 6513 4636 * 2735 5672 5569 * * 4 0 * * * * * * 4517 0 0 M 5 5052 * 3691 4057 3491 5981 5639 3976 * 3321 4019 * 5131 3350 * 3790 3194 3303 * 3781 5 0 * * * * * * 4541 0 0 F 6 2636 * * * 3737 * * 2274 * 2727 * * 5941 * * 6019 5092 1534 * * 6 0 * * * * * * 4679 0 0 V 7 5477 * * * 4761 5281 * 1752 * 1838 3494 6951 * 7107 * 5949 4733 2664 * 5464 7 0 * * * * * * 4640 0 0 E 8 3862 * 2255 2728 6159 3685 4194 * 6889 * 6849 4634 * 4270 4719 3185 3298 * * 3931 8 0 * * * * * * 4568 0 0 L 9 5352 * * 4707 3970 * 6208 2065 * 1297 4461 * * * * 6854 6605 3790 5045 4417 9 0 * * * * * * 4564 0 0 F 10 2769 4548 * * 2885 2674 * 4107 * 2824 3124 * * * * 4715 3166 4186 * * 10 0 * * * * * * 4564 0 0 R 11 4774 * 6993 4418 * 5944 4711 5576 3591 * 6569 3875 * 3258 1323 3646 4629 5210 * 5635 11 0 * * * * * * 4564 0 0 E 12 4385 * 2933 2233 * 5071 * 7081 4240 6221 * 4353 * 1726 4795 3747 4532 * * * 12 0 * * * * * * 4581 0 0 A 13 935 * * * 4482 3407 6413 * * 5388 5307 * * * * 2923 3025 5475 * * 13 0 * * * * * * 4581 0 0 L 14 * * * * 3152 * * 2612 * 1053 3441 * * * * * * 2964 * 5524 14 11 * 7004 * * * * 4581 0 0 W 15 6326 * 7164 3987 4131 * * 4364 3837 2477 2995 * * 6314 5003 6576 5094 3401 2392 3874 15 0 * * * * 0 * 4583 0 1000 M 16 4053 * * 6151 5444 6413 * 3408 5478 1790 4639 5588 * 5552 * 6167 2336 2389 * * 16 0 * * * * * * 4581 0 0 V 17 2132 6047 * * 5344 4947 * 2561 * 3972 5320 * * * * 4491 3200 1795 * * 17 0 * * * * * * 4581 0 0 L 18 3631 * * * 3161 * * 3312 * 1003 4598 * * * * 5920 6914 2818 * * 18 0 * * * * * * 4581 0 0 I 19 4625 * * 4811 * * * 2777 3014 1782 2846 * * 5969 6710 5171 4850 4183 4249 5128 19 0 * * * * * * 4582 0 0 M 20 4460 * * * 5365 6432 * 2335 * 1492 3573 * * * * 5427 5543 2186 5920 * 20 0 * * * * * * 4582 0 0 V 21 2075 5029 * * * 3294 * 5216 * 4405 6333 * * * * 1319 4755 3242 * * 21 0 * * * * * * 4582 0 0 C 22 1638 5713 * * * 1935 * 7016 * 2118 4116 * * * * 3798 * 5036 * * 22 11 * 7013 * * * * 4582 0 0 A 23 6354 * * * * * * * * * * * 121 * * * * 4240 6049 * 23 0 * * * * * 0 4583 0 1000 I 24 4106 6376 * * 5625 * * 2602 * 2180 3315 * 2564 * * 4714 5319 2385 * * 24 0 * * * * * 0 4583 0 1000 I 25 5479 * * * * * * 3570 * 512 4434 * * * * * * 2779 * * 25 0 * * * * 0 * 4583 0 1000 I 26 3146 6922 * * 6302 2754 * 2050 * 1467 5924 * * * * * * 3348 * * 26 0 * * * * * * 4582 0 0 P 27 2266 * * * 6181 * * 2850 * 4035 5910 * 3656 * * 4089 3761 1514 * * 27 0 * * * * * * 4582 0 0 S 28 945 * * * * 3212 * 6383 * 6053 6527 * * * * 1925 4266 5685 * * 28 0 * * * * * * 4582 0 0 L 29 3948 * * * 4921 * * 4986 * 943 2622 * * * * 4554 3575 4021 * * 29 11 7018 * 2000 415 * * 4581 1000 0 L 30 2816 6513 * * 6306 6812 * 2660 * 2403 * * * * * 7111 * 1086 * * 30 0 * * * * * * 4581 0 0 I 31 3893 * * * * * * 3007 * 3908 6872 * * * * 6891 6200 492 * * 31 0 * * * * * * 4581 0 0 G 32 * * * * * 78 * * * * * * * * * 5053 * 5487 * * 32 0 * * * * * * 4581 0 0 L 33 * * * * 4190 * * 2458 * 671 * * * * * * 6573 3005 * * 33 0 * * * * * * 4581 0 0 I 34 4041 * * * 5563 5318 * 2048 * 2114 7134 * * * * 5213 4905 1503 * * 34 0 * * * * * * 4581 0 0 V 35 * * * * * * * 924 * 4663 6282 * * * * * 5559 1324 * * 35 0 * * * * * * 4581 0 0 A 36 2438 * * * * 1809 * * * * * 5930 * * * 961 * * * * 36 0 * * * * * * 4581 0 0 I 37 * * * * 3889 * * 1263 * 1490 5780 * * * * * * 2819 * * 37 0 * * * * * * 4581 0 0 F 38 4443 * * * 1175 6370 * 3460 * 1666 * * * * * * * 3426 * * 38 0 * * * * * * 4581 0 0 Q 39 * * * * * * * * * * 5487 * * 58 * 5881 * * * * 39 0 * * * * * * 4581 0 0 A 40 381 * * * * * * 5746 * * * * * * * 4060 3315 4243 * * 40 0 * * * * * * 4581 0 0 A 41 1812 * * * * * * 3116 * 2456 4911 * * * * * 3329 1812 * * 41 0 * * * * * * 4581 0 0 T 42 * * * * 5942 * * * * * 4446 * 6391 * * 6347 130 * * * 42 0 * * * * * * 4581 0 0 S 43 * * * * * * * * * * * * * 429 * 1958 * * * * 43 0 * * * * * * 4581 0 0 I 44 * * * * * * * 748 * 2322 5130 * * * * * * 2505 * * 44 0 * * * * * * 4581 0 0 N 45 * * * * * * 3306 * * * * 2330 * 515 * * * * * * 45 0 * * * * * * 4581 0 0 E 46 * * 2037 403 * * * * * * * * * * * * * * * * 46 0 * * * * * * 4581 0 0 Q 47 3102 * * 5926 * * * * * 6666 3012 5746 4257 758 * 5261 4953 6306 * * 47 0 * * * * * * 4581 0 0 T 48 4017 * * * * * * * * * 6633 6200 * * * 3452 281 * * * 48 0 * * * * * * 4581 0 0 L 49 * * * * 5097 * * 2663 * 383 * * * * * * * 4440 * * 49 0 * * * * * * 4581 0 0 S 50 2887 * * * * 3977 * 6251 * 6567 6592 * 3047 6343 * 1607 1862 5031 * * 50 0 * * * * * * 4581 0 0 F 51 * * * * 370 * * 6200 * 5926 * * * 4171 * * 4358 5413 * 3871 51 0 * * * * * * 4581 0 0 L 52 3510 * * * * 3649 * 2357 * 3095 * * * * * * 5119 1024 * * 52 0 * * * * * * 4581 0 0 P 53 4501 * * * * * * 4165 * 4267 * * 373 * * * * 3717 * * 53 0 * * * * * * 4581 0 0 R 54 * * * * * * * * 233 * * * * * 2746 * * * * * 54 0 * * * * * * 4581 0 0 L 55 5121 * * * 4794 * * 1646 * 1155 3585 * * * * * * 3586 * * 55 0 * * * * * * 4581 0 0 I 56 3021 * * * 3750 4980 * 1517 * 2576 5942 * * * * * * 2074 * * 56 0 * * * * * * 4581 0 0 V 57 966 * * * 5881 3578 * 3992 * 5745 6370 * * * * 3920 4177 2537 * * 57 0 * * * * * * 4581 0 0 T 58 4422 * * * 5746 * * 2177 * 4395 3573 * * * * 6282 3136 1135 * * 58 0 * * * * * * 4581 0 0 L 59 3562 * * * 2162 3143 * 4392 * 2128 4248 * * * * 4398 4307 2722 * * 59 0 * * * * * * 4581 0 0 L 60 2343 * * * 4807 3260 * 2686 * 1437 * * * * * * * 2856 * * 60 0 * * * * * * 4581 0 0 A 61 2274 * * * 5881 4394 * 4404 * 5419 4301 * * * * 3881 2491 1468 * * 61 0 * * * * * * 4581 0 0 L 62 4584 * * * 3449 * * 2154 * 847 4423 * * * * * * 4665 * * 62 0 * * * * * * 4581 0 0 M 63 3265 * * * 2876 4768 * 2786 * 1656 3924 * * * * * 5296 2791 5327 * 63 0 * * * * * * 4581 0 0 L 64 3515 * * * 2651 * * 2472 * 1482 4916 * * * * * * 2558 * 6370 64 0 * * * * * * 4581 0 0 F 65 2789 4108 * * 2309 5098 * * * 1979 4287 * * * * 4273 2406 5571 * * 65 0 * * * * * * 4581 0 0 G 66 3163 * * * 5268 1039 * 4913 * 2610 4534 * * * * 3442 4936 * * 6534 66 0 * * * * * * 4581 0 0 H 67 5175 * * 5397 * 2533 4770 * 4855 * * 4920 998 * 5310 2781 * * * * 67 0 * * * * * * 4581 0 0 W 68 5328 * * * 3396 * * * * 4230 5524 * * * * 6811 4183 5926 488 6436 68 0 * * * * * * 4581 0 0 M 69 * * * * 4934 5212 * 2955 * 2250 960 * * 5942 * 5270 * 5072 * 6054 69 0 * * * * * * 4581 0 0 T 70 3383 6053 * * 4432 2810 * 4115 * 1565 3553 6390 * * * 3975 4233 4038 * 5077 70 0 * * * * * * 4581 0 0 Q 71 3261 * 4448 4272 * 3601 6643 6546 3775 * 5685 3330 * 2578 3208 3123 3491 5402 * * 71 0 * * * * * * 4581 0 0 M 72 5552 * * 2839 * * 4052 4157 3884 3357 3422 5401 4972 3186 3962 5025 3123 3494 * * 72 0 * * * * * * 4581 0 0 L 73 5395 5825 * * * * * 2981 * 1050 2135 * * * * 6251 5031 3687 * * 73 0 * * * * * * 4581 0 0 M 74 4451 * 5461 5881 6563 5376 5391 2896 6434 2711 3805 5838 * 4789 6992 3318 2783 2680 * 5453 74 0 * * * * * * 4581 0 0 E 75 4083 * 2304 2596 * 4017 6053 * 5464 5568 * 4040 * 3477 3329 3255 3621 * 5930 * 75 0 * * * * * * 4581 0 0 Y 76 6175 * * * 916 * 6020 6774 * 2902 5735 * * 6251 * * * * * 1910 76 0 * * * * * * 4581 0 0 F 77 2209 5279 * * 2675 5367 * 4555 * 5219 4673 * * * * 3743 1495 4673 * * 77 0 * * * * * * 4581 0 0 Y 78 4467 * 3971 4046 6098 7237 4097 3481 4652 3667 6673 3262 * 3749 3089 4582 3168 4096 * 5300 78 0 * * * * * * 4581 0 0 G 79 6514 * 3491 2734 5395 4339 4276 6534 7326 5415 4476 3228 * 2454 3500 5202 3419 6513 * 5038 79 0 * * * * * * 4581 0 0 L 80 3818 5261 * * * * * 1673 * 1488 3582 * * * 6654 6092 5781 3228 * * 80 0 * * * * * * 4609 0 0 I 81 5449 * * * 968 * * 3054 * 2586 4302 * * * * * * 5258 5006 3815 81 0 * * * * * * 4609 0 0 E 82 3568 * 2640 3704 4816 3407 * * 5150 4444 * 5201 * 3407 4841 2532 3124 6704 * 5569 82 0 * * * * * * 4570 0 0 R 83 5557 * 4752 4367 5820 5223 * 4166 3567 3503 4480 2310 * 3287 2686 4202 4998 * 5985 6097 83 0 * * * * * * 4522 0 0 L 84 6225 * * * 2747 * * 835 * 2930 3209 * * * * * * 5351 * 6251 84 0 * * * * * * 4522 0 0 P 85 2679 * * 4534 5774 6102 6638 5969 * * 6166 4523 703 6274 6203 4514 * * * * 85 0 * * * * * * 4406 0 0 Q 86 3494 * 5085 3582 * 4418 3056 * 3497 5687 6138 3853 * 2474 * 3293 2945 * * 5164 86 0 * * * * * * 4398 0 0 V 87 6012 * * * 3541 * * 2758 * 2128 2399 * * * 4493 * * 2383 * 3376 87 0 * * * * * * 4388 0 0 L 88 5440 * * * * * * 1350 * 2396 * * * * * * 5651 1416 * * 88 0 * * * * * * 4076 0 0 Y 89 * * * * 940 * 2105 * * * * * * * * * * * * 2020 89 0 * * 0 * * * 2174 0 0 //