HHsearch 1.5 NAME c8yv3A_ FAM FILE c8yv3A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c8yv3A_.a3m DATE Sat Apr 5 10:46:20 2025 LENG 30 match states, 30 columns in multiple alignment FILT 84 out of 86 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.0 EVD 0.6861 3.9619 SEQ >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >ss_conf 986688787777788677787777788788 >Consensus PxGxxGxxGpqGpkGxxGxxGpqGpxGxxG >c8yv3A_ PVGARGPAGPQGPRGDKGETGEQGDRGIKG >UniRef50_B8QR27(859-888:1500) VtaA11 n=6 Tax=Haemophilus parasuis RepID=B8QR27_HAEPR E=0.0001 s/c=1.59 id=48% cov=103% PQGPTGPTGPQGPTGPTGPQGPTGPTGPQG >UniRef50_C8RQF5(340-369:486) Putative uncharacterized protein n=1 Tax=Corynebacterium jeikeium ATCC 43734 RepID=C8RQF5_CORJE E=0.0007 s/c=1.51 id=48% cov=103% PQGVKGDRGPRGYKGDQGDPGPQGEPGDKG >UniRef50_C6W3P3(6-33:177) Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W3P3_DYAFD E=0.0007 s/c=1.60 id=45% cov=97% --GDKGDVGPAGPQGPAGPAGAQGPKGDSG >UniRef50_Q0I274(1298-1327:2851) Putative uncharacterized protein n=1 Tax=Haemophilus somnus 129PT RepID=Q0I274_HAES1 E=5e-05 s/c=1.63 id=42% cov=103% PKGDTGAKGEPGPAGERGPAGPEGKPGIQG >UniRef50_UPI000155C0BD(1147-1175:1844) PREDICTED: similar to collagen type VI alpha 4 n=2 Tax=Mammalia RepID=UPI000155C0BD E=0.0002 s/c=1.61 id=52% cov=97% --GNRGPVGPRGYQGSKGTAGLQGLPGPQG >UniRef50_A2AX52(1632-1661:2309) Collagen alpha-4(VI) chain n=12 Tax=Chordata RepID=CO6A4_MOUSE E=0.0003 s/c=1.55 id=48% cov=103% PSGSKGPDGPRGLKGEVGPAGERGPRGQQG >UniRef50_D1N0I7(278-307:780) Ig family protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0I7_9BACT E=0.0003 s/c=1.54 id=52% cov=103% PEGKQGPEGKQGIQGLKGDDGKQGPQGIQG >UniRef50_Q4RH39(543-569:752) Chromosome undetermined SCAF15069, whole genome shotgun sequence. (Fragment) n=5 Tax=Tetraodontidae RepID=Q4RH39_TETNG E=0.0005 s/c=1.69 id=42% cov=87% --GESGSPGPVGPQGLRGPAGPVGLEG--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 2683 0 0 V 2 4747 * * 4500 * * * 5368 1514 * 3433 5372 * 2489 * 3681 3168 4057 * * 2 0 * * * * * * 2683 0 0 G 3 * * * * * 0 * * * * * * * * * * * * * * 3 0 * * * * * * 2950 0 0 A 4 6468 * 1924 2373 * 5894 * 5906 5420 * * 5017 1481 6339 * 4068 * 6153 * * 4 0 * * * * * * 2950 0 0 R 5 5819 * 5921 4769 * 4640 * * 2144 6463 * * 4296 2357 2613 4925 2259 * * * 5 11 * 7107 * * * * 2947 0 0 G 6 * * * * * 59 * * * * * 4637 * * * * * * * * 6 0 * * * * * 0 2948 0 1000 P 7 3031 * 2156 4524 * * * * * 6339 * * 940 6424 * 5904 6383 * * 4795 7 0 * * * * * 0 2948 0 1000 A 8 2674 * 5847 4629 * * 6516 4321 4379 * 4260 4482 5110 3642 4324 3911 2092 3064 * * 8 59 4637 * 2000 415 0 * 2948 1000 1000 G 9 * * * * * 0 * * * * * * * * * * * * * * 9 0 * * * * * * 2946 0 0 P 10 5040 * 6389 4057 * * 4642 5107 5429 4476 * * 595 * 5810 5146 5607 4968 * * 10 0 * * * * * * 2946 0 0 Q 11 3852 * 6372 * * * * * 6356 * * * 5232 568 4072 5875 4051 3863 * * 11 56 4704 * 1861 465 * * 2946 1476 0 G 12 * * * * * 48 * * * * * * * * * * * 4920 * * 12 0 * * * * * * 2946 0 0 P 13 4336 * 5448 * * * * 4242 * 4337 * * 393 * * * * 5387 * 4660 13 25 7309 6526 1585 585 * * 2946 1000 0 R 14 3814 * * 5733 * * * * 1204 * * 4510 5691 1886 3915 * 4868 4578 * * 14 0 * * * * * 0 3133 0 1000 G 15 * * * * * 0 * * * * * * * * * * * * * * 15 11 6982 * 3585 126 0 * 3133 1000 1000 D 16 6052 * 1467 2577 * * * 5808 * 3768 * * 1681 * * 4818 * 5878 * * 16 0 * * * * * * 2946 0 0 K 17 4378 * * 6046 * * * 5674 1594 * * * 6292 2017 2460 * 2974 5872 * * 17 0 * * * * * * 2946 0 0 G 18 * * * * * 0 * * * * * * * * * * * * * * 18 0 * * * * * * 2946 0 0 E 19 4633 6033 1625 2917 * * * 5158 * 5192 * 6256 1488 * * 6285 5827 4948 * * 19 0 * * * * * * 2946 0 0 T 20 2773 * 5429 * * * 6526 4291 3827 * 4642 6261 3614 2274 3990 4920 2146 4848 * * 20 0 * * * * * * 2946 0 0 G 21 * * * * * 0 * * * * * * * * * * * * * * 21 0 * * * * * * 2946 0 0 E 22 3840 * 3507 3220 * * * 4739 5429 3914 * * 788 * * * * 6489 * 5810 22 0 * * * * * * 2946 0 0 Q 23 3834 * * 4286 * * * 4501 5328 * * 5808 5670 844 3489 * 3951 4028 * * 23 0 * * * * * * 2946 0 0 G 24 * * 5227 * * 39 * * * * * * * * * * * * * * 24 0 * * * * * * 2946 0 0 D 25 6491 * 3855 4479 * * * 4779 6158 3447 * 5943 647 * 5705 6614 5523 6426 * 6048 25 0 * * * * * * 2999 0 0 R 26 2399 * 4759 3898 * * 4721 * 2469 * * 4541 3294 2266 3822 6387 4255 * * * 26 0 * * * * * * 2999 0 0 G 27 * * * * * 0 * * * * * * * * * * * * * * 27 0 * * * * * * 2999 0 0 I 28 4013 * 2838 2881 6310 * * 2868 5902 5583 * * 1417 5644 * 4665 6329 6392 * 5864 28 0 * * * * * * 2990 0 0 K 29 3023 * 4507 5733 * * * * 2871 * 6393 4118 3310 1390 6318 6399 3823 5029 * * 29 0 * * * * * * 2990 0 0 G 30 * * * * * 0 * * * * * * * * * * * * * * 30 0 * * 0 * * * 2984 0 0 //