HHsearch 1.5 NAME c8yj2B_ FAM FILE c8yj2B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c8yj2B_.a3m DATE Sat Dec 7 10:42:10 2024 LENG 100 match states, 100 columns in multiple alignment FILT 100 out of 794 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.5 EVD 0.4525 -0.4600 SEQ >ss_pred CCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEECCCEEEEEECCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCC >ss_conf 9122777999515865589708999999787067079999539817055322013316651243899999815548869999992778896489763069 >Consensus xvxxxPxVxvxxxxxxxxgxxvxLxCxaxgfxPxxixxxWxxxgxxxxxxxxxxxxxxxxxxxxxxsxlxvxxxxxxxxtCxVxHxxlxxpxxxxxxxxx >c8yj2B_ MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM >UniRef50_UPI0001553B5B(106-197:255) PREDICTED: hypothetical protein n=1 Tax=Mus musculus RepID=UPI0001553B5B E=5e-07 s/c=0.60 id=19% cov=90% IIQVPPTLEISQQPTMVWNVINV-ICQIQQFYPQRLQVTWLENGNISRREVPFTHIINKDGTYNwiSWLMVNISALEENmVVTCQVEHDGQAE------- --- >UniRef50_P20761(124-221:333) Ig gamma-2B chain C region n=10 Tax=Eutheria RepID=IGG2B_RAT E=5e-05 s/c=0.50 id=14% cov=91% -----PSVFIFPPKPkdiLLISQNAKVTCVVVDVSeeEPDVQFSWFVNNVEVHTAQTQPREEQYNSTFRVVSALPIQHQDWMsgkEFKCKVNNKALPSPI EKT----- >UniRef50_O42404(143-239:296) ICOS ligand n=2 Tax=Gallus gallus RepID=O42404_CHICK E=1e-10 s/c=0.69 id=11% cov=98% ---SQPILSGPIRNSYSTGEEVTFSCRSDNGYPEPNVYWINRTDNTRLSQSDFNITQHPDGTYSVLSTLKVNATSDMQLECFIENKVLQENTSANYTEEM >UniRef50_UPI0000E4A76B(231-324:905) PREDICTED: similar to NCAM-140 n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A76B E=0.0001 s/c=0.51 id=17% cov=92% IVQVPPEWTVEPQDIkAVEGTTAMIQCAASGT-PDPIYSWEDQSGQKITPLEGKYELADDGEFFTV---LNLEADDDQIYTCVASNDAINSTFTTE---- - >UniRef50_UPI000175FBAC(239-339:388) PREDICTED: similar to hemochromatosis protein n=1 Tax=Danio rerio RepID=UPI000175FBAC E=9e-11 s/c=0.67 id=18% cov=97% MRKVKPRVRLM-KKKLPDSQGLQISCLATGFYPRHINLTLFRDAEPVDDDQIigGEILPNGDGMYQMRKSLIVSKEeldEGHEYTCTMKHLNLDNKLDIV FD--- >UniRef50_P03986(8-93:189) T-cell receptor gamma chain C region PT-gamma-1/2 n=19 Tax=Eutheria RepID=TCC_HUMAN E=3e-05 s/c=0.58 id=17% cov=83% ----SPKPTIFLPSIAEtkLQKAGTYLCLLEKFFPDIIKIHWQEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEESLDkEHRCIVRHE----------- --- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 2352 * 1706 1772 * * * * * * 2288 * * 1 0 * * * * * * 4769 0 0 I 2 4801 * * * * * * 2376 * 2769 * * * * 3727 * * 864 * * 2 0 * * * * * * 6774 0 0 Q 3 * * * 5044 * * 5008 * 2803 3809 * * 4738 1867 3078 2269 3534 * * * 3 0 * * * * * * 7090 0 0 R 4 1991 * * 3783 5494 * * * 4435 * 5642 5113 * * 3842 2494 3472 2177 * * 4 0 * * * * * * 7440 0 0 T 5 2467 * * 3951 * * * * 3771 5757 * * 1149 4196 5884 3890 4858 4701 * * 5 0 * * * * * * 7934 0 0 P 6 * * * * * * * * * * * * 0 * * * * * * * 6 24 5906 * 1585 585 * * 8231 1000 0 K 7 5716 5777 5465 2149 * * * 4903 2143 4893 * * * 3452 3951 2667 4130 4305 * * 7 18 6331 * 0 * * * 8259 1000 0 I 8 6354 * * * 5248 * * 2570 * 3356 5781 * 4374 * * * 4740 795 6023 * 8 17 6405 * 1000 1000 * * 8369 1000 0 Q 9 5475 * 5479 3521 6051 6249 3818 4779 4145 6076 * 4329 6575 6240 4648 1771 2387 5439 * 4623 9 109 4813 4761 977 1023 * * 8612 2244 0 V 10 4332 * * 4655 * 3806 * 2128 * 3254 5250 * 5233 6109 5918 * 5885 1427 4934 * 10 90 4844 5290 1935 437 0 * 8583 2163 2159 Y 11 5876 * 5950 4095 2172 3232 * 3382 3745 4179 6132 * 4343 * 6321 2770 4388 4575 * 4571 11 117 4883 4513 799 1234 1016 984 8580 2179 1736 S 12 4824 * * 5309 6442 4668 * 5131 6441 3321 6303 * 1224 4350 4715 3072 3515 6116 * * 12 128 3562 * 339 2256 326 2306 8733 3670 2418 R 13 3412 5543 4677 3785 * 6079 3847 6240 3517 4190 * 4079 2602 4621 4032 2977 4142 5383 * * 13 39 * 5219 * * 0 * 8788 0 1000 H 14 4325 6399 4538 2841 6098 6089 3013 6275 3156 5446 6275 4211 3651 3626 4152 3156 4855 5385 * * 14 71 5050 5790 709 1365 * 0 8746 1877 1714 P 15 3797 * 4104 3864 * 5511 5101 3537 5425 6262 * 5333 2150 4418 3428 3125 4089 4863 6859 5536 15 127 3837 6109 1174 845 * 0 8791 3992 2244 A 16 2836 * * 4783 5242 4954 * 3961 6257 3240 5364 4889 4019 5931 * 4117 3701 1743 * 6342 16 28 5681 * 584 1586 1940 435 8803 1777 2751 E 17 5979 * 4349 2354 * 5188 4966 4586 3584 3988 * 4197 3591 5409 4871 3168 4065 3286 * 5423 17 106 4402 5401 1318 740 1444 661 8812 2513 2270 N 18 4170 6725 3952 2505 5553 4359 4845 4878 5259 2693 * 6515 3323 6955 4646 3987 4125 3942 6186 5917 18 70 4934 6103 775 1267 405 2031 8814 2224 2872 G 19 6576 6098 3699 4007 * 1011 4627 * 4783 * 6707 3427 6439 5269 4710 3745 6647 * * * 19 29 6881 6435 0 * 0 * 8819 1000 1744 K 20 * * 3322 3151 * 3537 5243 * 3312 6112 * 2709 5349 2343 5259 4175 3638 5422 * * 20 16 * 6459 * * * 0 8847 0 1000 S 21 4940 * 3836 2620 * 4980 6553 4460 3449 5241 6130 4878 2977 5716 5392 3037 2855 4301 * * 21 21 6117 * 1000 1000 0 * 8832 1000 1733 N 22 2525 * 7036 * * 4749 6380 4025 * 3925 5616 3596 5366 4867 5406 5606 5267 1329 * 6327 22 29 7036 6326 1000 1000 * * 8863 1000 0 F 23 5591 * * 4102 4750 * 5409 3928 4266 5265 4943 4005 4899 4181 6523 3541 1530 3608 6959 * 23 68 6017 5034 0 * 0 * 8882 1000 1000 L 24 5412 * * * 2940 * * 3623 * 632 4620 * * * * * * 4329 * 5091 24 39 6127 6320 0 * 0 * 8868 1000 2341 N 25 4210 * * 5009 * 5027 * 4589 5485 3771 6495 4775 * 4253 4004 2699 1759 3017 * 6408 25 15 6610 * 2807 222 0 * 8874 1000 1000 C 26 4963 67 * * * * * * * * * * * * * * * * * 6219 26 13 6770 * 0 * * * 8908 1000 0 Y 27 4588 * 5305 4019 4049 6037 3610 5739 4870 3010 * 5663 * 3531 3557 2989 3246 3953 4659 6633 27 0 * * * * * * 8908 0 0 V 28 1294 * * * 5656 * * 2659 * 4419 * * * * * 3190 * 2145 * 4980 28 14 6706 * 2000 415 * * 8908 1000 0 S 29 5595 * 4426 3637 * 5159 4873 6447 5213 4293 4834 4667 6706 4111 4267 1896 2936 4965 4444 5072 29 18 6365 * 1000 1000 * * 8908 1000 0 G 30 6255 * 3036 4152 * 1085 5609 * 5913 * * 3051 4036 6425 4582 3938 * * * * 30 57 * 4684 * * * * 8908 0 0 F 31 3585 * 5150 * 1201 3253 * 5141 * 5510 6422 * * * * 3932 5440 4970 4766 2950 31 43 6750 5645 2000 415 543 1672 8781 1000 2344 H 32 4514 * * * 2534 * 3914 * 4175 4830 4899 4974 4763 6445 3692 3019 6290 6546 * 1792 32 17 6393 * 1000 1000 577 1601 8842 1000 2238 P 33 5693 * 5926 6412 * * 6022 * * 5114 * 6483 323 5175 6510 4398 6458 * * * 33 72 6483 4738 0 * 0 * 8870 1000 1000 S 34 2499 * 2978 3752 5936 6011 * 6277 2477 5462 * 4293 2838 4457 3917 5432 5578 * 5153 * 34 0 * * * * 1886 455 8848 0 2678 D 35 2462 * 3009 4433 * 4897 5565 3987 5641 6457 * 3662 2564 5635 5504 3861 4982 3346 6670 * 35 64 * 4528 * * 606 1544 8870 0 2192 I 36 6621 * 4974 4337 4758 * * 1817 6494 2353 6225 4568 4523 4707 6441 5404 4560 2590 * * 36 29 6547 6786 0 * 246 2673 8903 1000 3510 E 37 4310 * 6580 2953 * * 5663 3998 3278 4565 4441 3221 * 4480 4726 3128 2985 3602 6340 6498 37 17 * 6408 * * * 0 8870 0 1671 V 38 6466 * * 6378 3284 6162 * 2229 6635 2575 5652 * * 6522 * 6408 3202 1931 5508 4909 38 13 6827 * 0 * 0 * 8858 1000 2175 D 39 6998 * 4719 4446 5831 * * 5494 3659 4802 5817 6407 * 3873 4073 3085 2011 * 2117 * 39 0 * * * * * * 8908 0 0 L 40 * * * 6516 4006 * 5374 4612 6194 4299 4780 * * 6515 4689 * * 6365 557 5697 40 43 6717 5677 3322 152 * * 8908 1000 0 L 41 * * 4366 4661 2642 * 6675 3924 3032 2514 5909 4443 * 4681 3458 4756 4154 * 5601 3789 41 0 * * * * 0 * 8859 0 1689 K 42 5616 4753 5125 3443 * 3882 5016 5542 2175 4960 6923 3813 4888 4580 2696 4118 * 3801 6706 * 42 91 5174 4890 1261 779 * * 8908 2283 0 N 43 * * 1702 3698 * 3257 * 6263 3966 5437 * 1854 * 6162 5361 4021 4862 * * * 43 49 6198 5668 3459 138 0 * 8851 1000 2431 G 44 4897 * 3369 4197 * 1103 * * 3948 5470 * 3522 * * 5396 3093 6468 6445 * 6456 44 17 6458 * 2322 322 945 1057 8860 1000 1670 E 45 5371 * 4178 2810 * 3575 5564 5523 3524 4600 6691 4574 5296 2792 3954 3751 3862 3413 * * 45 0 * * * * * 0 8867 0 1000 R 46 6475 6251 4544 2933 5486 4487 5111 3699 3556 4414 * 4062 2560 4313 4359 5083 4527 3836 * 5279 46 57 4694 * 1168 849 0 * 8867 2287 1000 I 47 6501 * 4515 5130 5358 6587 5829 2554 4951 2123 5255 5598 6770 5688 3825 4031 4140 2571 * * 47 55 4739 * 1692 534 * * 8908 2857 0 E 48 5016 * 4104 3680 * 4755 3756 5789 3581 4914 * 5227 2637 3702 3730 3045 3543 5842 * 5446 48 35 5379 * 0 * * * 8908 2145 0 K 49 3679 * 3499 3375 * 2562 4145 6608 3977 4660 * 3763 3509 5090 5024 3501 3723 * * 6355 49 0 * * * * * * 8908 0 0 V 50 3747 6274 4610 3018 6710 3731 6961 3921 4776 3350 5896 4489 5694 4098 5148 3407 4564 2728 * * 50 58 4674 * 2598 260 * * 8908 2700 0 E 51 3755 * 4064 2891 * 4850 5225 5045 6829 5653 6817 3737 4332 3781 4236 2475 3264 4093 * 6783 51 27 7001 6501 1000 1000 * * 8908 1000 0 H 52 4702 * 3789 4200 5572 5148 4462 3923 4637 3726 6553 6566 5731 3070 3976 3617 2369 5513 * 4684 52 31 6505 6590 1000 1000 0 * 8852 1000 1000 S 53 6345 * 5116 * 3844 4254 5193 4679 4911 4208 6805 3520 3749 3691 5852 3405 2296 3496 5711 6379 53 29 * 5656 * * 0 * 8867 0 1000 D 54 * * 4332 3110 6670 3464 4230 4833 5244 6777 6574 3752 4245 2983 4678 4157 3061 3285 * 5118 54 43 5576 6893 2000 415 0 * 8860 1000 1659 L 55 4920 * 4372 3956 3938 4821 4903 3643 4919 4406 * 5182 2741 5108 5521 4619 2739 3037 * 5667 55 40 5184 * 0 * * 0 8869 2420 1000 S 56 4352 * 6906 4392 5531 4581 4993 3785 4578 2491 5729 4125 5040 3433 3783 4687 3826 3437 * 4860 56 48 5840 6019 612 1533 * 0 8869 1739 1000 F 57 3804 * 4053 3628 6581 * 6455 4049 3999 4945 5711 4757 2288 3442 4324 3009 6803 6663 * 3963 57 62 5691 5463 2073 391 960 1041 8825 1819 1698 S 58 4081 * 3745 5453 6807 3036 4714 6423 4665 5155 5376 2165 5294 4406 4819 2693 3955 6425 * 6730 58 62 7106 4845 1000 1000 1919 443 8914 1000 2609 K 59 3391 * 3392 3256 * 2197 6375 * 3373 5996 * 4398 3738 4759 4213 3844 3903 * * 6299 59 11 7036 * 0 * 886 1124 8844 1000 3421 D 60 4222 * 1612 3677 * 3503 * 6386 4171 5628 6618 2778 5043 6647 6780 3429 6636 4724 * 5721 60 69 * 4413 * * 1461 651 8836 0 2184 W 61 6645 * 4372 4031 4299 1365 5842 6356 6309 4766 * 4698 * 6391 4457 2902 5186 4971 4288 5496 61 17 * 6404 * * 949 1053 8753 0 3581 S 62 5716 * 5132 6758 4921 4252 6274 6119 5671 2401 5719 4691 5578 * 4146 3172 1597 6847 * 4795 62 35 7052 5921 1585 585 1908 447 8823 1000 2795 F 63 6370 6180 * 5522 1424 4822 * 5337 * 4078 * * 6287 * 6713 5051 4515 6628 6378 1547 63 29 6649 6696 2000 415 268 2562 8826 1000 3124 Y 64 4903 * 5062 4796 4653 * 5888 6789 * 6807 4774 4016 4936 3019 3846 1874 2544 5336 6422 5550 64 34 5412 * 1288 760 * 0 8865 1737 1606 L 65 2985 5723 * * * 5727 * 3214 3804 2963 4841 * 6845 4781 4307 3577 3098 2539 * 5317 65 16 * 6488 * * * 0 8865 0 1606 L 66 * * 6262 5299 3389 * 4676 4168 5259 2886 5078 * * 5388 3828 2679 2322 4835 4272 4534 66 30 6783 6484 0 * * 0 8853 1000 2185 Y 67 3683 * 5879 6163 * 6519 4106 4524 6507 4230 6404 5009 * * 4753 1156 4342 3313 * 4809 67 34 6660 6217 1585 585 2011 411 8838 1000 2684 Y 68 4345 * 4778 4634 5498 * 4546 3492 5264 4338 5408 5587 * 3291 4073 3304 2515 4115 4392 4126 68 46 * 4980 * * 931 1072 8821 0 2755 T 69 5062 5417 * * 6465 6595 6172 3962 * 776 6338 6191 * * 4587 * 5409 2629 * 6624 69 42 5682 6721 3170 170 699 1382 8822 1124 3016 E 70 5120 * 4371 3434 * 5337 5632 4485 4203 5456 5796 4074 4113 4833 3407 3890 2182 4239 5170 5026 70 30 6823 6404 0 * 614 1528 8855 1000 2078 F 71 6566 * 6512 * 2994 * 6450 2970 * 2191 * * 6357 * 6465 5558 5028 1354 * 5138 71 41 5780 6642 1585 585 * 0 8844 1654 1733 T 72 5040 * 3812 4933 6824 6542 6504 5456 4276 4484 * 4282 3276 4398 4343 2805 2082 4297 6686 5328 72 84 4138 * 595 1566 * 0 8835 2958 2480 P 73 3043 * 4861 4832 6117 4782 6377 * 3627 3315 * 6686 1847 5008 3122 4209 5097 5314 5454 * 73 223 2804 * 1520 618 0 * 8835 5221 2480 T 74 3572 * 4874 2255 6314 3894 5348 * 4777 6425 4199 3302 6480 4107 6932 2466 3380 * 6726 * 74 64 4518 * 1237 796 * * 8908 2832 0 E 75 4861 5576 1913 3003 * * 3430 6553 5668 3630 5177 4465 4330 4068 3686 4354 6314 5859 6407 * 75 13 6803 * 0 * * * 8908 1000 0 K 76 3671 * 3355 3099 * 2251 4652 * 3614 5609 5234 4695 * 4769 4208 3817 4574 6314 3764 * 76 46 5004 * 1288 760 * * 8908 2647 0 D 77 4259 * 2189 3573 * 2228 4805 * 3841 * 4495 3651 * 5080 4563 3551 5571 5431 * * 77 216 2849 * 1435 666 * * 8908 5142 0 E 78 5165 * 4792 2372 * 6495 5701 3592 3262 4638 * 3350 * 4635 4330 3812 3054 3244 * * 78 116 3696 * 1107 901 * * 8871 3971 0 Y 79 * 5892 * * 2219 5553 4565 3355 * 3525 6615 * * * * * * 3218 * 1313 79 0 * * * * * * 8871 0 0 A 80 5163 * 5353 4984 5223 6539 * 3555 4195 6346 * * * 4274 3556 2818 1309 4492 * * 80 20 6151 * 1585 585 * * 8871 1105 0 C 81 * 56 * * * * * * * 5892 * * * * * * 5553 * * * 81 0 * * * * * * 8871 0 0 R 82 5736 * * 2939 5352 * 5900 4009 4012 4788 5096 * * 3037 2281 4948 4237 2396 5865 * 82 0 * * * * * * 8860 0 0 V 83 2638 * * * * 5138 * 3697 * 5381 6507 * * * * * * 517 * * 83 10 7144 * 0 * * * 8833 1000 0 N 84 4687 * 4797 2701 6016 * 6802 6194 3294 6748 6544 4313 * 3486 3792 2237 3146 4551 4970 * 84 84 4412 6715 1395 690 * * 8845 2277 0 H 85 * * * * 4899 6250 496 6400 * * * 3001 6593 6475 6350 5167 * * * 4445 85 21 * 6124 * * 0 * 8583 0 1000 V 86 4795 6138 4571 2664 * 4856 * 4989 3030 6140 6207 4299 2506 5116 3465 4254 3761 6214 5203 5590 86 0 * * * * 0 * 8394 0 1000 T 87 1565 * 5492 4634 * 2693 * 5918 5089 4690 * 6131 * * * 2169 3363 5242 * * 87 0 * * * * * * 8450 0 0 L 88 4127 * * * 6350 4692 * 5176 * 686 * * * 6021 * 3008 4597 4351 * 6330 88 47 4972 * 1931 439 * * 8317 1855 0 S 89 4324 * 3547 3622 * 3495 4574 * 3455 6109 5871 5982 3534 3022 6006 2836 3228 4566 * * 89 52 4827 * 0 * * * 8295 1841 0 Q 90 4675 * 5163 1854 * * 4667 * 3283 6041 * 4559 5595 2523 5157 2806 4219 4745 * * 90 22 * 6034 * * * * 8231 0 0 P 91 4741 * 4735 3847 * * 5978 * 5039 5841 * 4010 902 5533 6453 3603 4243 * * 5241 91 0 * * * * * 0 8108 0 1000 K 92 5081 * 6065 5010 5680 5722 * 2613 3668 1430 4903 * * 3811 4773 * 4874 3358 * * 92 46 6069 5949 0 * 0 * 8108 1000 1000 I 93 5672 5977 4969 3624 * * * 3257 4407 3583 * 5629 * 4852 3195 3903 1734 3561 * * 93 0 * * * * * 0 8030 0 1000 V 94 5523 * * 4708 4973 * * 3997 2251 3618 * * * 4354 2892 5364 3041 2288 * 5659 94 0 * * * * 0 * 7963 0 1000 K 95 5662 * 3927 2910 * * 3241 * 3032 * * 3429 5317 4134 3555 4058 2396 5434 * 5613 95 0 * * * * * * 7872 0 0 W 96 * * * * 2319 * * 4770 * 4648 * * * * * * * * 929 2339 96 55 4729 * 2322 322 * * 7105 1000 0 D 97 * * 2463 2232 * * * * 2444 * * 3786 * * * 3252 2336 4431 * * 97 0 * * * * * * 6865 0 0 R 98 * * * 4236 * * * 4207 3763 2496 * * 1285 4513 2413 * * * * * 98 0 * * * * * * 6528 0 0 D 99 * * 1346 2152 * * 3425 * 4276 * * 3469 * 4447 * 4565 4096 * * * 99 0 * * * * * * 6502 0 0 M 100 * * * * * * * 2079 * 2066 2380 * * * * * * 1589 * * 100 0 * * 0 * * * 6014 0 0 //