HHsearch 1.5 NAME c8vioK_ FAM FILE c8vioK_ COM /bmm/www/servers/phyre2/HH/hhmake -i c8vioK_.a3m DATE Sat Feb 22 09:34:17 2025 LENG 122 match states, 122 columns in multiple alignment FILT 64 out of 66 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.4278 -0.0263 SEQ >ss_pred CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECH HHHCCCCCCCCCCCCCCCCCCC >ss_conf 9756787628731235664532236852223589887624679974342089999579999999936899875745489994475278884047898070 1110004511222114751789 >Consensus pTlnQlxrxxrxxkxxxxkxxxlxxxPqxkGvvlxvxxxxPKKPNSAxRKxarVrLsngkxvxAyIPGeGhnlqeHxxVlvrGGrxxDlPGVkykiVrGx xDxxxVxxRkxxRSkYGxkkpk >c8vioK_ PTIQQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALRKVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRGS LDTQGVKNRKQARSRYGAKKEK >UniRef50_D2EG00(37-142:145) 30S ribosomal protein S12P n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EG00_9EURY E=1e-14 s/c=0.77 id=43% cov=78% ------------------KNDPLAGAPQARGIVLEKVEITPKKPSSGKRKSCKVQLTkNGKIITAYIPWSKGVsyVDEHNDVIIEriggaqKGARGDLPG VKFKIIKvnGISLKELVKGRKQK---------- >UniRef50_B7P9R2(64-176:176) 30S ribosomal protein S12, putative n=1 Tax=Ixodes scapularis RepID=B7P9R2_IXOSC E=4e-30 s/c=1.17 id=43% cov=93% PVLEVLNAAGPPPPRKKRRHP-LDNKPFMKGVVIKTLVKKPKKPNSANRKCVLVRLSNGKEGTAYIPGVGHNLQEHSVVLVYRARTKDVPGLKLKVVRGK YDCAHVIRKPQSGS-------- >UniRef50_P0C5Y0(3-128:140) Ribosomal protein S12, mitochondrial n=5 Tax=Dictyosteliida RepID=RT12_DICCI E=6e-23 s/c=0.86 id=49% cov=99% -TLNQIKDRKARGSKKKRKT-LLTGYPQKKGFCVKVYVTKPKKPNSAIRKVAKVTIrlkNKRKNLIAYIPGFGpHNLQPLSTVLIKGGRCQDLPGVKYRL VRKHYDFQIAErfPRKNRRSKFSVKNEK >UniRef50_B3T6H5(58-178:181) Putative ribosomal protein S12 n=1 Tax=uncultured marine microorganism HF4000_APKG2H5 RepID=B3T6H5_9ZZZZ E=2e-18 s/c=0.77 id=37% cov=87% -------RKFRDREFKRRHGGVLKHDPlrgstQAKGIVIEKVGFEAKQPNSGIRKAVKISLiRTGNKLTAFAPGDGaiSFIDEHDEVLVEGiggsmGRSy GDLPGVRFKVikVNGVSLDEMVRGRKEK---------- >UniRef50_D1LDP4(30-148:163) Ribosomal protein S12 n=2 Tax=Euplotidae RepID=D1LDP4_9SPIT E=3e-24 s/c=0.95 id=47% cov=83% ----------------------LYGAPQRKAVVLRVVLMTPKKPNSAIRHVARVSIyKTGRRALCRIPGIGSSPTKFNRVLCRGGRANDLPTVRLTLVRG VYDFSGLYNKKRRRSIYGAPRPE >UniRef50_B7XJ22(25-139:139) SSU ribosomal protein S12P n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XJ22_ENTBH E=2e-13 s/c=0.67 id=31% cov=73% ----------RKRQQGKIYKSVIGNKPQANAIVLDKLGVEAKQPNSAVRKVCRVQcIATRRTVFAFAPGDGalKVIDPNDEVTIQslgrsGKSVGDRPGI KYEIIK------------------------ >UniRef50_Q4MYA6(3-120:124) Ribosomal protein S12, putative n=1 Tax=Theileria parva RepID=Q4MYA6_THEPA E=1e-23 s/c=0.93 id=38% cov=98% -TLNQSIKRKKQNKKKIT---VLNHNPQLEGFLCSIISMSPKKPNSAKRKVGIIELKNNKKIKAYIPGERSVVRDKTRVLIRGGNTRDLPGVNHKIVLNM MNCREDKPRHNKRSKYGVKKIK # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 2238 0 0 T 2 * * * * * * * * * * * * * * * 3602 190 4613 * * 2 0 * * * * * * 2827 0 0 I 3 5347 * * * 4224 * * 2748 * 744 5107 4968 * * * * * 4768 * 3673 3 0 * * * * * * 2857 0 0 Q 4 4319 * * 4687 * * * * 3983 * * 637 * 2896 4829 6554 * 5347 * * 4 0 * * * * * * 2857 0 0 Q 5 5484 * * 4586 * * * * * * * * * 241 5040 * 5488 4753 * * 5 30 5596 * 0 * * * 2909 1000 0 L 6 5488 * * * 5400 * * 2797 5596 962 3201 * * * * 3468 * 3696 * * 6 0 * * * * * * 2909 0 0 V 7 5239 * * * * * 2948 2202 3430 3352 5516 4088 * * 2835 5540 5796 2716 * 5414 7 45 5027 * 0 * * * 2931 1000 0 R 8 5038 * 4080 5219 5103 5731 * 5374 2375 * * * * 4470 873 5183 * * * * 8 0 * * * * * * 3089 0 0 K 9 5142 5401 * * 4694 2917 3517 * 1919 5657 * 4809 * 3495 3175 4462 6127 * * 3178 9 44 5052 * 0 * * * 3164 1084 0 G 10 5672 4380 * * 4451 1468 * * 1827 * * 5684 3106 6374 * 4678 5804 5944 * 5472 10 26 * 5790 * * * * 3164 0 0 R 11 5076 * 5563 5983 * * * 4792 2946 * * * 1920 * 1058 5451 * * * * 11 54 6007 5556 0 * 0 * 3237 1000 1000 R 12 5085 * 4878 4750 4087 * 4474 4788 2018 6107 * * 2987 3484 2006 * * * * 4905 12 0 * * * * 0 * 3256 0 1000 D 13 3614 * 4466 3917 * 4178 * 3905 2635 4873 * 4401 2853 4383 3216 4783 4301 5014 * 5037 13 0 * * * * * * 3256 0 0 K 14 * 6485 * 4515 * * 5909 5968 1053 3309 6313 * 4658 3769 3009 4486 * 4822 * * 14 0 * * * * * * 3256 0 0 I 15 5091 * * 5526 4913 4228 5566 4912 1900 4690 6436 5309 4500 3659 2567 3586 4204 4836 * * 15 19 6221 * 0 * * * 3256 1000 0 A 16 4001 * * 6313 5782 4556 * 4082 1642 5057 5310 * 3998 * 2324 * 3221 5672 * 4629 16 0 * * * * * * 3257 0 0 K 17 3005 * * * * * * 3499 1420 * * 5074 2965 5447 2349 5568 6037 * * * 17 20 6157 * 0 * * * 3209 1000 0 V 18 * * 4793 * 5296 * * 3655 3863 3882 * 6306 3618 * 2761 1931 2586 4264 * * 18 144 5050 3953 0 * * * 3207 1270 0 K 19 5945 * * 5167 * * 5103 * 819 * * * * 5703 2353 6032 4230 6286 * 3974 19 57 4687 * 2020 409 973 1028 3116 1399 1546 T 20 2666 * 4910 * * 5171 5513 * 4050 5103 * 3154 5429 6208 * 1474 4202 3833 * 4783 20 124 4909 4358 0 * * 0 3042 1000 1000 A 21 4028 5223 3149 5444 * 3730 * 5331 2718 * * 5323 1405 * 4275 3842 * * * * 21 154 4840 3909 0 * 573 1609 3000 1000 1795 A 22 1412 * 4115 * * 6092 * * 4110 3754 * * 2472 6224 5460 5885 * 2889 4277 * 22 0 * * * * 0 * 3084 0 1802 L 23 * * * * 3995 6245 * 3940 6087 454 6013 * 5470 * * 5951 4669 5608 * * 23 0 * * * * * * 3139 0 0 K 24 4590 * 3018 2008 5188 3360 * 4862 3825 * 5608 3389 * 4673 * 3877 5408 4531 * 3911 24 11 7032 * 3700 115 * * 3139 1000 0 G 25 6182 4945 * 6472 * 1166 4043 * 4209 4837 6322 3213 * 4294 5679 2974 5820 6480 * * 25 21 6098 * 2585 263 * * 3124 1000 0 S 26 2434 1870 5484 * * 5616 * * 3066 * * 2297 * * 3566 5301 * 6264 * 4241 26 33 5465 * 2322 322 * * 3124 1000 0 P 27 * 5931 * * * * * * * * * * 203 * * 3447 5450 * * * 27 31 5551 * 2322 322 * * 3166 1000 0 Q 28 * * * 6359 2722 * 3634 5520 * 6383 3867 * * 692 4853 * * * * * 28 0 * * * * * * 3166 0 0 R 29 1993 * * * * 4704 * 4994 1761 3475 4200 * * * 2336 * * 6283 * 5121 29 0 * * * * * * 3166 0 0 R 30 * * * 3837 * * * * 685 * * 4900 * 5093 2202 5893 6465 * * * 30 0 * * * * * * 3166 0 0 G 31 3646 * * * * 169 * * * * * * * * * * * 5036 * * 31 0 * * * * * * 3166 0 0 V 32 * * * * 4030 * * 1524 * 4297 * * * * * 4956 5605 1037 * * 32 0 * * * * * * 3166 0 0 C 33 * 1326 * * * * * 4670 * 4726 * * * * * * * 932 * * 33 0 * * * * * * 3166 0 0 T 34 * 4714 * * * * * 3669 * 867 4661 * * 5601 * 5463 3503 2609 * * 34 0 * * * * * * 3128 0 0 R 35 * 6175 4902 2573 * * * * 1350 * * * * 4416 2147 3877 5456 5106 * * 35 0 * * * * * * 3128 0 0 V 36 * * * * * * * 3478 2081 * * * 4940 * * * 2524 1097 * * 36 0 * * * * * * 3128 0 0 Y 37 * * * * 2580 4662 * 4282 4792 2975 3762 * * * 3889 4420 5783 1929 * 3186 37 0 * * * * * * 3128 0 0 T 38 4841 * * 4351 * 2530 * 1934 * 4859 * * * * * 4714 1897 2834 * * 38 0 * * * * * * 3128 0 0 T 39 6361 * * * 5568 * * 3792 3793 3329 3291 * * 5601 2164 5430 2850 2216 * * 39 0 * * * * * * 3128 0 0 T 40 5492 * * 2265 * * 5114 * 1655 * * * * * * 3194 1671 * * * 40 0 * * * * * * 3128 0 0 P 41 2530 * * * * * * * * * * * 336 4841 * * * * * * 41 0 * * * * * * 3128 0 0 K 42 * * * * * * * * 141 * * * * * 3425 * * * * * 42 0 * * * * * * 3128 0 0 K 43 * * * * * * * * 314 * * * * 2354 * * * * * * 43 0 * * * * * * 3128 0 0 P 44 * * * * * * * * * * * * 0 * * * * * * * 44 0 * * * * * * 3128 0 0 N 45 * * * * * * 4237 * * * * 123 * * * 5139 * * * * 45 0 * * * * * * 3128 0 0 S 46 6330 * * * * * * * * * * * * * * 18 * * * * 46 0 * * * * * * 3128 0 0 A 47 311 * * * * 2368 * * * * * * * * * * * * * * 47 0 * * * * * * 3128 0 0 L 48 * * * 4010 * * * 2472 3188 2226 5743 2445 * 2879 4940 * * 3980 * * 48 0 * * * * * * 3128 0 0 R 49 * 6230 * * * 6242 * 4841 * * * * * * 91 * * * * * 49 0 * * * * * * 3128 0 0 K 50 * * * * * * 4859 * 148 * * * 4940 * 5036 * * * * * 50 0 * * * * * * 3128 0 0 V 51 4031 1421 * * * * * 2884 * * 6328 * * * * 5322 4670 1501 * * 51 0 * * * * * * 3113 0 0 A 52 746 3119 * * * 4677 * * * * * * * * * * * 2003 * * 52 0 * * * * * * 3085 0 0 R 53 * * * * * * * 3885 1906 3494 * * * * 929 * 5861 5495 6352 * 53 0 * * * * * * 3085 0 0 V 54 4903 * * * * * * 3241 * 4583 * * * * * * * 288 * * 54 0 * * * * * * 3085 0 0 K 55 * * * 4677 * * * * 2511 * * 5440 * 2195 1102 4199 5396 * * * 55 96 3955 * 0 * * * 3085 1707 0 L 56 * * * * * * * 3435 * 140 * * * * * * * * * * 56 356 2194 * 368 2149 * * 3085 2187 0 T 57 4906 * * * * * * * 1933 * * 4445 * * 5711 1455 1929 6328 * * 57 66 4484 * 0 * * * 3085 1386 0 S 58 * * 4741 * * * * * 5396 * * 758 * 5005 * 3370 2187 * * * 58 0 * * * * * * 3085 0 0 Q 59 * * * * * 483 * * 3550 * * 4677 5005 5425 3368 6811 * * * * 59 0 * * * * * * 3085 0 0 V 60 4695 * * 6212 6645 * 5220 5063 1121 6180 6328 3975 * 6352 1921 * 5005 6675 * 6125 60 0 * * * * * * 3085 0 0 E 61 * * 4653 1905 3953 * * 3912 3198 4536 * 5396 * 4741 4821 5440 2952 2631 * * 61 0 * * * * * * 3085 0 0 V 62 3812 * * * * 5760 * 1830 * 3365 5583 * * * * * * 968 * * 62 0 * * * * * * 3085 0 0 T 63 6185 5127 6180 * 3774 4829 5440 3172 4677 3835 * 5861 * * * 3677 1258 3665 * * 63 0 * * * * * * 3085 0 0 A 64 319 3420 * * * 4539 * * * * * * * * * 5643 * 4569 * * 64 0 * * * * * * 3085 0 0 Y 65 * * * * 1748 * 3193 * 5005 6011 * * * * 4821 * * * * 969 65 0 * * * * * * 3085 0 0 I 66 3477 * * * * * * 487 * 5577 * * * * * * * 2509 * * 66 0 * * * * * * 3085 0 0 P 67 * * * * * 5198 * * * * * * 75 * * 5434 * * * * 67 0 * * * * * * 3084 0 0 G 68 * * * * * 191 * * * * * 3661 * * * * * * 4467 * 68 25 * 5888 * * * * 3021 0 0 E 69 * * 2447 977 5382 * * 2711 * * * 5360 * * * 5247 4897 4390 * * 69 0 * * * * 0 * 3013 0 1000 G 70 * * * * * 307 5606 * 3378 * * 5888 * * 4110 * * * * * 70 306 2389 * 875 1137 * * 3021 2131 0 H 71 5524 * * * * 3975 592 * 4887 * * 3090 * 8036 * 3378 * * * * 71 26 5785 * 1000 1000 * * 3071 1000 0 N 72 4921 * 6459 * 3077 * * * * 5704 * 797 * 5690 * 3887 4776 3072 * * 72 38 5260 * 1000 1000 * * 3071 1000 0 L 73 4531 * * * * * * 2205 * 803 * * 4836 * * 5956 * 3113 * * 73 0 * * * * * * 3071 0 0 Q 74 * * 2507 5600 * * 5418 * 5738 * * 4784 * 699 3755 * 4836 * * * 74 25 5870 * 1585 585 * * 3071 1000 0 E 75 * * 4138 549 * * * * 3874 * * * 4122 3445 * * 5418 5740 * * 75 0 * * * * * * 3071 0 0 H 76 * * * * 4836 * 275 * 4612 5403 * 3751 * * * * * * * * 76 0 * * * * * * 3071 0 0 S 77 * * 2149 * * 3680 6015 * * * * 2597 * 6203 * 1116 4612 * * * 77 0 * * * * * * 3071 0 0 M 78 * * 5260 2274 5974 * * 3135 * 5447 5353 * * 5102 3401 * 3343 1443 * * 78 0 * * * * * * 3071 0 0 V 79 * * * * * * * 4371 * * * * * * * * * 71 * * 79 0 * * * * * * 3071 0 0 L 80 * * * * 6433 * * 3951 * 439 4448 * * * * * 3816 4729 * 4980 80 0 * * * * * * 3071 0 0 V 81 * 3980 * * 4604 * * 1477 * 5655 6308 * * * * * * 989 * * 81 103 3862 * 2456 290 * * 3071 1400 0 R 82 * 5019 * 2347 * * * * 3027 * * * * 4285 787 * * * * 5708 82 121 3630 * 2483 284 * * 3107 1746 0 G 83 * * * * * 185 * * 4573 * * * 5867 * 5192 * * 4894 * * 83 126 3581 * 2440 294 * * 3071 1506 0 G 84 5768 * * * * 239 5600 * 3945 * * * * 5601 5142 * * * * * 84 0 * * * * * * 3071 0 0 R 85 3361 * * * * 4914 * * * * * 4221 * 3775 534 4267 * * * * 85 0 * * * * * * 3071 0 0 V 86 3005 2914 * * * * * * 4628 4894 4175 * 6472 * 4179 4090 3336 1400 * 6617 86 43 5095 * 0 * * * 3071 1297 0 K 87 * * * * * 2213 * * 1806 * * 4218 5077 1682 3277 * * * * * 87 25 5870 * 0 * * * 3071 1000 0 D 88 * 4748 55 * * * * * * * * * * * * * * * * * 88 0 * * * * * * 3071 0 0 L 89 * 3463 * * * * * 2716 * 746 * * * * 4887 5956 5867 3414 * * 89 0 * * * * * * 3071 0 0 P 90 * * * * * * * 3378 * * * * 184 * * 5418 * * * * 90 0 * * * * * * 3071 0 0 G 91 * * * * * 96 * * * * * * * * * 5102 4836 * * * 91 0 * * * * * * 3071 0 0 V 92 * 4570 * * * * * 3256 5956 5768 4748 * * * * * * 356 * * 92 0 * * * * * * 3071 0 0 R 93 * * * * * * 4198 * 1103 * * 4069 * 5447 1331 * * * * * 93 0 * * * * * * 3071 0 0 Y 94 5065 * * * 2890 * 3489 5838 * 2540 * * * * * * * * * 845 94 0 * * * * * * 3100 0 0 K 95 * * * 4853 * * 2067 * 895 * * 5039 * * 4043 * 3354 * * * 95 0 * * * * * * 3006 0 0 I 96 4535 3107 * * 5431 * * 1712 * 2568 * * 5610 * * * 6026 1700 * * 96 119 3654 * 1000 1000 * * 3006 1499 0 I 97 * * * * * * * 1790 * * * * * * * * * 492 * * 97 0 * * * * * * 3153 0 0 R 98 * * * * * * * * 3163 3876 * 3362 * * 468 * * * * * 98 54 4773 * 1000 1000 * * 3189 1000 0 G 99 * * * * * 246 * * 4994 * * 3343 * * * 5220 * * * * 99 0 * * * * * * 3149 0 0 S 100 1914 * * * * * 4994 4713 2016 5552 4332 * * * * 4422 5640 1835 * * 100 0 * * * * * * 3149 0 0 L 101 5342 * * * 3821 4775 6026 * 4868 2159 3707 4354 * * * 2850 * * * 1598 101 0 * * * * * * 3149 0 0 D 102 * * 331 * * * * * * 3232 4354 4332 * * * * * * * * 102 0 * * * * * * 3149 0 0 T 103 5000 2324 4860 * 2638 * * 5623 3523 1755 4547 * * * 4883 * 3416 * * * 103 0 * * * * * * 3149 0 0 Q 104 1692 * * 2988 * 3388 5286 5508 * 2914 5979 * 4846 3827 4253 3212 * 7112 * * 104 0 * * * * * * 3125 0 0 G 105 4681 * * 4253 * 1136 2882 3081 * 4627 4808 * 3016 * * * * * * * 105 0 * * * * * * 3125 0 0 V 106 3861 * 4253 * * * * 3554 * 3766 * * * * * * * 474 * * 106 0 * * * * * * 3125 0 0 K 107 3364 * * 3668 * 3761 * 3635 1648 5526 * 4975 4804 4449 3848 * * 3216 * 4691 107 50 4878 * 1000 1000 * * 3118 1000 0 N 108 * * 2889 * * 1569 * * 3075 * * 2040 3502 * 5316 5253 5231 * * * 108 0 * * * * * * 3147 0 0 R 109 * * * * * * * * 2416 * * * * 5851 331 * * * * * 109 0 * * * * * * 3147 0 0 K 110 5098 * * * * 6358 4186 4040 971 3903 6459 * 5290 5891 3592 5920 3500 5362 * * 110 0 * * * * * * 3144 0 0 Q 111 * * * 3463 * * * * 3871 * * 2975 * 1724 3399 2707 2616 * * * 111 0 * * * * * * 3129 0 0 A 112 4011 * * * * 3046 * * 2072 * * * * * 2346 1387 * * * * 112 0 * * * * * * 3044 0 0 R 113 * * * * * 4366 * * 4855 * * * * * 125 * * * * * 113 0 * * * * * * 2664 0 0 S 114 * * * * * * * * * * * * * * * 0 * * * * 114 0 * * * * * * 2664 0 0 R 115 * * * * * * * 3176 457 4412 * * * * 3135 * * * * * 115 0 * * * * * * 2620 0 0 Y 116 * * * * 4188 * * * * * * * * * * * * * * 81 116 0 * * * * * * 2620 0 0 G 117 * * * * * 81 * * * * * * * * * 4188 * * * * 117 0 * * * * * * 2620 0 0 A 118 1505 * * * * * * 3486 4802 * * * * * * * 2864 1377 * * 118 0 * * * * * * 2631 0 0 K 119 * * * 4194 * * * * 309 * * * 3377 * 4574 * * * * * 119 0 * * * * * * 2631 0 0 K 120 * * * * * * * * 643 * * 3925 * * 1767 * * * * * 120 0 * * * * * * 2511 0 0 E 121 * * * 3345 * * * 2806 4361 * * * 494 * * * * * * * 121 0 * * * * * * 2472 0 0 K 122 * * * 3314 * * * * 256 * * * * 4011 * * * * * * 122 0 * * 0 * * * 2358 0 0 //